RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 MBD3O95983 291 aa16.15■□□□□ 0.18
PDZRN3-208ENST00000479530 MCM5P33992 734 aa16.15■□□□□ 0.18
PDZRN3-208ENST00000479530 TAF7Q15545 349 aaPredicted RBP16.15■□□□□ 0.18
PDZRN3-208ENST00000479530 CSPP1Q1MSJ5 1256 aa16.15■□□□□ 0.18
PDZRN3-208ENST00000479530 TPRNQ4KMQ1 711 aa16.15■□□□□ 0.18
PDZRN3-208ENST00000479530 UNC5CLQ8IV45 518 aa16.15■□□□□ 0.18
PDZRN3-208ENST00000479530 TSC1Q92574 1164 aa16.15■□□□□ 0.18
PDZRN3-208ENST00000479530 UPF3BQ9BZI7 483 aaKnown RBP16.15■□□□□ 0.18
PDZRN3-208ENST00000479530 SLIT1O75093 1534 aa16.15■□□□□ 0.18
PDZRN3-208ENST00000479530 HMMRO75330 724 aa16.14■□□□□ 0.17
PDZRN3-208ENST00000479530 TSPY26PQ9H489 355 aa16.14■□□□□ 0.17
PDZRN3-208ENST00000479530 PTMAP06454 111 aaKnown RBP16.14■□□□□ 0.17
PDZRN3-208ENST00000479530 SASS6Q6UVJ0 657 aa16.14■□□□□ 0.17
PDZRN3-208ENST00000479530 LRRC59Q96AG4 307 aaKnown RBP16.14■□□□□ 0.17
PDZRN3-208ENST00000479530 IL1RAPL2Q9NP60 686 aa16.14■□□□□ 0.17
PDZRN3-208ENST00000479530 NWD1Q149M9 1564 aa16.13■□□□□ 0.17
PDZRN3-208ENST00000479530 DYNC1I1O14576 645 aa16.13■□□□□ 0.17
PDZRN3-208ENST00000479530 CUL4AQ13619 759 aa16.13■□□□□ 0.17
PDZRN3-208ENST00000479530 ESYT1Q9BSJ8 1104 aa16.13■□□□□ 0.17
PDZRN3-208ENST00000479530 OSBPL3Q9H4L5 887 aa16.13■□□□□ 0.17
PDZRN3-208ENST00000479530 SALL3Q9BXA9 1300 aa16.12■□□□□ 0.17
PDZRN3-208ENST00000479530 ATP8B2P98198 1209 aa16.12■□□□□ 0.17
PDZRN3-208ENST00000479530 C17orf53Q8N3J3 647 aaPredicted RBP16.12■□□□□ 0.17
PDZRN3-208ENST00000479530 MAP7D2Q96T17 732 aa16.12■□□□□ 0.17
PDZRN3-208ENST00000479530 IL25Q9H293 177 aa16.12■□□□□ 0.17
PDZRN3-208ENST00000479530 MAP3K5Q99683 1374 aa16.12■□□□□ 0.17
PDZRN3-208ENST00000479530 HDGFL1Q5TGJ6 251 aa16.12■□□□□ 0.17
PDZRN3-208ENST00000479530 ANO2Q9NQ90 1003 aa16.12■□□□□ 0.17
PDZRN3-208ENST00000479530 PHF8Q9UPP1 1060 aa16.12■□□□□ 0.17
PDZRN3-208ENST00000479530 HTATSF1O43719 755 aaKnown RBP16.11■□□□□ 0.17
PDZRN3-208ENST00000479530 RILPL2Q969X0 211 aa16.11■□□□□ 0.17
PDZRN3-208ENST00000479530 LRRCC1Q9C099 1032 aa16.11■□□□□ 0.17
PDZRN3-208ENST00000479530 MAP4K4O95819 1239 aaPredicted RBP16.11■□□□□ 0.17
PDZRN3-208ENST00000479530 USP48Q86UV5 1035 aa16.11■□□□□ 0.17
PDZRN3-208ENST00000479530 TCHHQ07283 1943 aa16.1■□□□□ 0.17
PDZRN3-208ENST00000479530 A0A0U1RQG5 324 aaPredicted RBP16.1■□□□□ 0.17
PDZRN3-208ENST00000479530 KIAA2012Q0VF49 1180 aa16.1■□□□□ 0.17
PDZRN3-208ENST00000479530 NUTM1Q86Y26 1132 aa16.1■□□□□ 0.17
PDZRN3-208ENST00000479530 PRDM10Q9NQV6 1147 aa16.1■□□□□ 0.17
PDZRN3-208ENST00000479530 MX1P20591 662 aa16.09■□□□□ 0.17
PDZRN3-208ENST00000479530 ESCO1Q5FWF5 840 aa16.09■□□□□ 0.17
PDZRN3-208ENST00000479530 USP25Q9UHP3 1055 aa16.09■□□□□ 0.17
PDZRN3-208ENST00000479530 TRIM6-TRIM34B2RNG4 842 aa16.09■□□□□ 0.17
PDZRN3-208ENST00000479530 GNAI3P08754 354 aa16.09■□□□□ 0.17
PDZRN3-208ENST00000479530 NBPF7P0C2Y1 421 aaPredicted RBP16.09■□□□□ 0.17
PDZRN3-208ENST00000479530 FMN2Q9NZ56 1722 aa16.09■□□□□ 0.17
PDZRN3-208ENST00000479530 FAM177BA6PVY3 158 aa16.09■□□□□ 0.17
PDZRN3-208ENST00000479530 DTNBO60941 627 aa16.09■□□□□ 0.17
PDZRN3-208ENST00000479530 CHMLP26374 656 aa16.09■□□□□ 0.17
PDZRN3-208ENST00000479530 MPRIPQ6WCQ1 1025 aa16.09■□□□□ 0.17
PDZRN3-208ENST00000479530 TTC12Q9H892 705 aaPredicted RBP16.09■□□□□ 0.17
PDZRN3-208ENST00000479530 CHPF2Q9P2E5 772 aa16.08■□□□□ 0.16
PDZRN3-208ENST00000479530 DNTTIP2Q5QJE6 756 aaKnown RBP16.08■□□□□ 0.16
PDZRN3-208ENST00000479530 IP6K1Q92551 441 aa16.08■□□□□ 0.16
PDZRN3-208ENST00000479530 UBTFL1P0CB47 393 aaPredicted RBP16.07■□□□□ 0.16
PDZRN3-208ENST00000479530 MCM2P49736 904 aa16.07■□□□□ 0.16
PDZRN3-208ENST00000479530 EIF4A1P60842 406 aaKnown RBP16.07■□□□□ 0.16
PDZRN3-208ENST00000479530 PPP1R42Q7Z4L9 355 aa16.07■□□□□ 0.16
PDZRN3-208ENST00000479530 INTS4Q96HW7 963 aaKnown RBP16.07■□□□□ 0.16
PDZRN3-208ENST00000479530 LARP6Q9BRS8 491 aaKnown RBP16.07■□□□□ 0.16
PDZRN3-208ENST00000479530 SETD1BQ9UPS6 1966 aaKnown RBP16.07■□□□□ 0.16
PDZRN3-208ENST00000479530 PRAMEF22A3QJZ6 481 aa16.07■□□□□ 0.16
PDZRN3-208ENST00000479530 PSME1Q06323 249 aa16.07■□□□□ 0.16
PDZRN3-208ENST00000479530 ORAI2Q96SN7 254 aa16.07■□□□□ 0.16
PDZRN3-208ENST00000479530 PI4KAP2A4QPH2 592 aa16.06■□□□□ 0.16
PDZRN3-208ENST00000479530 ZNF710Q8N1W2 664 aa16.06■□□□□ 0.16
PDZRN3-208ENST00000479530 PI4KAP1Q8N8J0 262 aa16.06■□□□□ 0.16
PDZRN3-208ENST00000479530 SRCIN1Q9C0H9 1055 aa16.06■□□□□ 0.16
PDZRN3-208ENST00000479530 SURF6O75683 361 aaKnown RBP16.05■□□□□ 0.16
PDZRN3-208ENST00000479530 HCLS1P14317 486 aaPredicted RBP16.05■□□□□ 0.16
PDZRN3-208ENST00000479530 MYRIPQ8NFW9 859 aa16.05■□□□□ 0.16
PDZRN3-208ENST00000479530 CNPY2Q9Y2B0 182 aa16.05■□□□□ 0.16
PDZRN3-208ENST00000479530 MARF1Q9Y4F3 1742 aaKnown RBP16.05■□□□□ 0.16
PDZRN3-208ENST00000479530 ANKARQ7Z5J8 1434 aa16.05■□□□□ 0.16
PDZRN3-208ENST00000479530 LMOD2Q6P5Q4 547 aa16.05■□□□□ 0.16
PDZRN3-208ENST00000479530 SYAP1Q96A49 352 aaPredicted RBP16.05■□□□□ 0.16
PDZRN3-208ENST00000479530 ADCY5O95622 1261 aa16.04■□□□□ 0.16
PDZRN3-208ENST00000479530 TRHP20396 242 aaPredicted RBP16.04■□□□□ 0.16
PDZRN3-208ENST00000479530 MCCP23508 829 aa16.04■□□□□ 0.16
PDZRN3-208ENST00000479530 TUBGCP6Q96RT7 1819 aa16.04■□□□□ 0.16
PDZRN3-208ENST00000479530 RPAP1Q9BWH6 1393 aaPredicted RBP16.04■□□□□ 0.16
PDZRN3-208ENST00000479530 SOS1Q07889 1333 aaPredicted RBP16.04■□□□□ 0.16
PDZRN3-208ENST00000479530 NOLC1Q14978 699 aaKnown RBP eCLIP16.04■□□□□ 0.16
PDZRN3-208ENST00000479530 PROSER3Q2NL68 480 aa16.04■□□□□ 0.16
PDZRN3-208ENST00000479530 PIBF1Q8WXW3 757 aa16.04■□□□□ 0.16
PDZRN3-208ENST00000479530 XRN1Q8IZH2 1706 aaKnown RBP16.04■□□□□ 0.16
PDZRN3-208ENST00000479530 FGD1P98174 961 aa16.04■□□□□ 0.16
PDZRN3-208ENST00000479530 SSH3Q8TE77 659 aa16.04■□□□□ 0.16
PDZRN3-208ENST00000479530 CEMIPQ8WUJ3 1361 aa16.03■□□□□ 0.16
PDZRN3-208ENST00000479530 SRGAP3O43295 1099 aa16.03■□□□□ 0.16
PDZRN3-208ENST00000479530 ANAPC15P60006 121 aa16.03■□□□□ 0.16
PDZRN3-208ENST00000479530 ZNF530Q6P9A1 599 aaPredicted RBP16.03■□□□□ 0.16
PDZRN3-208ENST00000479530 MTERF4Q7Z6M4 381 aaKnown RBP16.03■□□□□ 0.16
PDZRN3-208ENST00000479530 STAP2Q9UGK3 403 aa16.03■□□□□ 0.16
PDZRN3-208ENST00000479530 BEND3Q5T5X7 828 aa16.02■□□□□ 0.16
PDZRN3-208ENST00000479530 AXIN2Q9Y2T1 843 aa16.02■□□□□ 0.16
PDZRN3-208ENST00000479530 WDR33Q9C0J8 1336 aaKnown RBP16.02■□□□□ 0.15
PDZRN3-208ENST00000479530 LRRC37A3O60309 1634 aa16.01■□□□□ 0.15
PDZRN3-208ENST00000479530 BTBD11A6QL63 1104 aa16.01■□□□□ 0.15
PDZRN3-208ENST00000479530 PHF14O94880 888 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms