RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 PLSCR1O15162 318 aa5.8□□□□□ -1.48
COPS7B-220ENST00000479430 OATP04181 439 aa5.8□□□□□ -1.48
COPS7B-220ENST00000479430 AEBP1Q8IUX7 1158 aa5.8□□□□□ -1.48
COPS7B-220ENST00000479430 TBC1D2Q9BYX2 928 aa5.8□□□□□ -1.48
COPS7B-220ENST00000479430 PLSCR2Q9NRY7 297 aa5.8□□□□□ -1.48
COPS7B-220ENST00000479430 CRB1P82279 1406 aa5.8□□□□□ -1.48
COPS7B-220ENST00000479430 ATP10DQ9P241 1426 aa5.8□□□□□ -1.48
COPS7B-220ENST00000479430 N4BP2Q86UW6 1770 aaPredicted RBP5.8□□□□□ -1.48
COPS7B-220ENST00000479430 SPDYE5A6NIY4 337 aa5.79□□□□□ -1.48
COPS7B-220ENST00000479430 SLC34A2O95436 690 aa5.79□□□□□ -1.48
COPS7B-220ENST00000479430 CSB-PGBD3P0DP91 1061 aa5.79□□□□□ -1.48
COPS7B-220ENST00000479430 CLK2P49760 499 aaKnown RBP5.79□□□□□ -1.48
COPS7B-220ENST00000479430 PADI6Q6TGC4 694 aa5.79□□□□□ -1.48
COPS7B-220ENST00000479430 KCTD17Q8N5Z5 321 aa5.79□□□□□ -1.48
COPS7B-220ENST00000479430 PXYLP1Q8TE99 480 aa5.79□□□□□ -1.48
COPS7B-220ENST00000479430 DCAF11Q8TEB1 546 aa5.79□□□□□ -1.48
COPS7B-220ENST00000479430 SIRT1Q96EB6 747 aa5.79□□□□□ -1.48
COPS7B-220ENST00000479430 ADGRG1Q9Y653 693 aa5.79□□□□□ -1.48
COPS7B-220ENST00000479430 COL24A1Q17RW2 1714 aa5.79□□□□□ -1.48
COPS7B-220ENST00000479430 DOT1LQ8TEK3 1739 aa5.79□□□□□ -1.48
COPS7B-220ENST00000479430 HAX1O00165 279 aa5.78□□□□□ -1.48
COPS7B-220ENST00000479430 SEC24BO95487 1268 aa5.78□□□□□ -1.48
COPS7B-220ENST00000479430 COL13A1Q5TAT6 717 aaPredicted RBP5.78□□□□□ -1.48
COPS7B-220ENST00000479430 TYW1BQ6NUM6 668 aa5.78□□□□□ -1.48
COPS7B-220ENST00000479430 BANK1Q8NDB2 785 aa5.78□□□□□ -1.48
COPS7B-220ENST00000479430 LIMD1Q9UGP4 676 aa5.78□□□□□ -1.48
COPS7B-220ENST00000479430 QRICH2Q9H0J4 1663 aa5.78□□□□□ -1.48
COPS7B-220ENST00000479430 USP19O94966 1318 aa5.77□□□□□ -1.49
COPS7B-220ENST00000479430 PNPLA7Q6ZV29 1317 aa5.77□□□□□ -1.49
COPS7B-220ENST00000479430 QSER1Q2KHR3 1735 aa5.77□□□□□ -1.49
COPS7B-220ENST00000479430 PPIP5K1Q6PFW1 1433 aa5.77□□□□□ -1.49
COPS7B-220ENST00000479430 NBPF1Q3BBV0 1214 aa5.77□□□□□ -1.49
COPS7B-220ENST00000479430 C6orf132Q5T0Z8 1188 aa5.77□□□□□ -1.49
COPS7B-220ENST00000479430 RETREG2Q8NC44 543 aa5.77□□□□□ -1.49
COPS7B-220ENST00000479430 GDPD2Q9HCC8 539 aa5.77□□□□□ -1.49
COPS7B-220ENST00000479430 CCDC88AQ3V6T2 1871 aa5.77□□□□□ -1.49
COPS7B-220ENST00000479430 LY75O60449 1722 aa5.77□□□□□ -1.49
COPS7B-220ENST00000479430 TAF1LQ8IZX4 1826 aa5.76□□□□□ -1.49
COPS7B-220ENST00000479430 POTEFA5A3E0 1075 aa5.76□□□□□ -1.49
COPS7B-220ENST00000479430 EXOC5O00471 708 aa5.76□□□□□ -1.49
COPS7B-220ENST00000479430 HSPA6P17066 643 aa5.76□□□□□ -1.49
COPS7B-220ENST00000479430 FBLN1P23142 703 aa5.76□□□□□ -1.49
COPS7B-220ENST00000479430 SRPK2P78362 688 aaKnown RBP5.76□□□□□ -1.49
COPS7B-220ENST00000479430 IRF5Q13568 498 aa5.76□□□□□ -1.49
COPS7B-220ENST00000479430 TMEM259Q4ZIN3 620 aa5.76□□□□□ -1.49
COPS7B-220ENST00000479430 RIC3Q7Z5B4 369 aa5.76□□□□□ -1.49
COPS7B-220ENST00000479430 NLRP13Q86W25 1043 aa5.76□□□□□ -1.49
COPS7B-220ENST00000479430 SYTL4Q96C24 671 aaPredicted RBP5.76□□□□□ -1.49
COPS7B-220ENST00000479430 CABP1Q9NZU7 370 aa5.76□□□□□ -1.49
COPS7B-220ENST00000479430 THRAP3Q9Y2W1 955 aaKnown RBP5.76□□□□□ -1.49
COPS7B-220ENST00000479430 PCDHGA4Q9Y5G9 962 aa5.76□□□□□ -1.49
COPS7B-220ENST00000479430 CPDO75976 1380 aa5.76□□□□□ -1.49
COPS7B-220ENST00000479430 WDR90Q96KV7 1748 aa5.76□□□□□ -1.49
COPS7B-220ENST00000479430 WDR17Q8IZU2 1322 aa5.75□□□□□ -1.49
COPS7B-220ENST00000479430 USP6P35125 1406 aa5.75□□□□□ -1.49
COPS7B-220ENST00000479430 CLCN6P51797 869 aa5.75□□□□□ -1.49
COPS7B-220ENST00000479430 PPP2R2DQ66LE6 453 aa5.75□□□□□ -1.49
COPS7B-220ENST00000479430 TTC13Q8NBP0 860 aa5.75□□□□□ -1.49
COPS7B-220ENST00000479430 MTMR14Q8NCE2 650 aa5.75□□□□□ -1.49
COPS7B-220ENST00000479430 DDX54Q8TDD1 881 aaKnown RBP5.75□□□□□ -1.49
COPS7B-220ENST00000479430 SPIRE2Q8WWL2 714 aa5.75□□□□□ -1.49
COPS7B-220ENST00000479430 LTV1Q96GA3 475 aaPredicted RBP5.75□□□□□ -1.49
COPS7B-220ENST00000479430 TFCP2L1Q9NZI6 479 aa5.75□□□□□ -1.49
COPS7B-220ENST00000479430 POLR3AO14802 1390 aaPredicted RBP5.75□□□□□ -1.49
COPS7B-220ENST00000479430 PCNTO95613 3336 aa5.75□□□□□ -1.49
COPS7B-220ENST00000479430 SLIT3O75094 1523 aa5.74□□□□□ -1.49
COPS7B-220ENST00000479430 ITGB4P16144 1822 aa5.74□□□□□ -1.49
COPS7B-220ENST00000479430 CSPP1Q1MSJ5 1256 aa5.74□□□□□ -1.49
COPS7B-220ENST00000479430 AMIGO3Q86WK7 504 aa5.74□□□□□ -1.49
COPS7B-220ENST00000479430 COL23A1Q86Y22 540 aaPredicted RBP5.74□□□□□ -1.49
COPS7B-220ENST00000479430 FBXW7Q969H0 707 aa5.74□□□□□ -1.49
COPS7B-220ENST00000479430 NLRP2Q9NX02 1062 aa5.74□□□□□ -1.49
COPS7B-220ENST00000479430 C5P01031 1676 aa5.74□□□□□ -1.49
COPS7B-220ENST00000479430 EIF3AQ14152 1382 aaKnown RBP5.73□□□□□ -1.49
COPS7B-220ENST00000479430 AATKQ6ZMQ8 1374 aa5.73□□□□□ -1.49
COPS7B-220ENST00000479430 POM121CA8CG34 1229 aa5.73□□□□□ -1.49
COPS7B-220ENST00000479430 POLD1P28340 1107 aa5.73□□□□□ -1.49
COPS7B-220ENST00000479430 ABL2P42684 1182 aa5.73□□□□□ -1.49
COPS7B-220ENST00000479430 FOSBP53539 338 aa5.73□□□□□ -1.49
COPS7B-220ENST00000479430 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.73□□□□□ -1.49
COPS7B-220ENST00000479430 SP7Q8TDD2 431 aaPredicted RBP5.73□□□□□ -1.49
COPS7B-220ENST00000479430 GZF1Q9H116 711 aaPredicted RBP5.73□□□□□ -1.49
COPS7B-220ENST00000479430 TOGARAM1Q9Y4F4 1720 aa5.73□□□□□ -1.49
COPS7B-220ENST00000479430 TRPM1Q7Z4N2 1603 aa5.73□□□□□ -1.49
COPS7B-220ENST00000479430 CPSF1Q10570 1443 aaKnown RBP5.73□□□□□ -1.49
COPS7B-220ENST00000479430 TNS2Q63HR2 1409 aa5.73□□□□□ -1.49
COPS7B-220ENST00000479430 ERBB3P21860 1342 aa5.73□□□□□ -1.49
COPS7B-220ENST00000479430 BRD4O60885 1362 aaPredicted RBP5.72□□□□□ -1.49
COPS7B-220ENST00000479430 KIAA1210Q9ULL0 1709 aa5.72□□□□□ -1.49
COPS7B-220ENST00000479430 NDUFV2P19404 249 aa5.72□□□□□ -1.49
COPS7B-220ENST00000479430 DIXDC1Q155Q3 683 aa5.72□□□□□ -1.49
COPS7B-220ENST00000479430 QPCTQ16769 361 aa5.72□□□□□ -1.49
COPS7B-220ENST00000479430 ARHGEF25Q86VW2 580 aa5.72□□□□□ -1.49
COPS7B-220ENST00000479430 DNAJC5GQ8N7S2 189 aa5.72□□□□□ -1.49
COPS7B-220ENST00000479430 CALR3Q96L12 384 aaKnown RBP5.72□□□□□ -1.49
COPS7B-220ENST00000479430 CARD10Q9BWT7 1032 aa5.72□□□□□ -1.49
COPS7B-220ENST00000479430 NMRK2Q9NPI5 230 aa5.72□□□□□ -1.49
COPS7B-220ENST00000479430 PCDHB15Q9Y5E8 787 aa5.72□□□□□ -1.49
COPS7B-220ENST00000479430 UBR3Q6ZT12 1888 aa5.72□□□□□ -1.49
COPS7B-220ENST00000479430 NFAT5O94916 1531 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms