RNA–Protein interactions for RNA: ENST00000479249.5

CUTA-207, Transcript of cutA divalent cation tolerance homolog, humanhuman

TSL 3

Gene CUTA, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUTA-207ENST00000479249 RPS6KA4O75676 772 aa11.21□□□□□ -0.61
CUTA-207ENST00000479249 PNMA8AQ86V59 439 aaPredicted RBP11.21□□□□□ -0.61
CUTA-207ENST00000479249 DDX21Q9NR30 783 aaKnown RBP eCLIP11.21□□□□□ -0.61
CUTA-207ENST00000479249 TMOD3Q9NYL9 352 aa11.21□□□□□ -0.61
CUTA-207ENST00000479249 KDRP35968 1356 aa11.2□□□□□ -0.62
CUTA-207ENST00000479249 SBNO2Q9Y2G9 1366 aa11.2□□□□□ -0.62
CUTA-207ENST00000479249 LTBP3Q9NS15 1303 aa11.2□□□□□ -0.62
CUTA-207ENST00000479249 POLRMTO00411 1230 aaKnown RBP11.2□□□□□ -0.62
CUTA-207ENST00000479249 CYP27B1O15528 508 aa11.2□□□□□ -0.62
CUTA-207ENST00000479249 HOXC9P31274 260 aa11.2□□□□□ -0.62
CUTA-207ENST00000479249 FKBP8Q14318 412 aa11.2□□□□□ -0.62
CUTA-207ENST00000479249 MAP1SQ66K74 1059 aaPredicted RBP11.2□□□□□ -0.62
CUTA-207ENST00000479249 HACL1Q9UJ83 578 aa11.2□□□□□ -0.62
CUTA-207ENST00000479249 ASAP1Q9ULH1 1129 aa11.2□□□□□ -0.62
CUTA-207ENST00000479249 AFDNP55196 1824 aaKnown RBP11.2□□□□□ -0.62
CUTA-207ENST00000479249 USP42Q9H9J4 1324 aaKnown RBP11.19□□□□□ -0.62
CUTA-207ENST00000479249 AOC2O75106 756 aa11.19□□□□□ -0.62
CUTA-207ENST00000479249 NBPF6Q5VWK0 638 aa11.19□□□□□ -0.62
CUTA-207ENST00000479249 NBPF4Q96M43 638 aa11.19□□□□□ -0.62
CUTA-207ENST00000479249 TAOK3Q9H2K8 898 aa11.19□□□□□ -0.62
CUTA-207ENST00000479249 NRXN2Q9P2S2 1712 aa11.18□□□□□ -0.62
CUTA-207ENST00000479249 MYH14Q7Z406 1995 aaKnown RBP11.18□□□□□ -0.62
CUTA-207ENST00000479249 EPHX2P34913 555 aa11.18□□□□□ -0.62
CUTA-207ENST00000479249 AMPHP49418 695 aa11.18□□□□□ -0.62
CUTA-207ENST00000479249 USHBP1Q8N6Y0 703 aa11.18□□□□□ -0.62
CUTA-207ENST00000479249 SLC17A8Q8NDX2 589 aa11.18□□□□□ -0.62
CUTA-207ENST00000479249 COL6A3P12111 3177 aa11.18□□□□□ -0.62
CUTA-207ENST00000479249 RTL1A6NKG5 1358 aa11.17□□□□□ -0.62
CUTA-207ENST00000479249 TLL2Q9Y6L7 1015 aa11.17□□□□□ -0.62
CUTA-207ENST00000479249 EDC4Q6P2E9 1401 aaKnown RBP11.17□□□□□ -0.62
CUTA-207ENST00000479249 H0YIN7 160 aa11.16□□□□□ -0.62
CUTA-207ENST00000479249 NKX1-1Q15270 411 aaPredicted RBP11.16□□□□□ -0.62
CUTA-207ENST00000479249 C2CD5Q86YS7 1000 aa11.16□□□□□ -0.62
CUTA-207ENST00000479249 SRP68Q9UHB9 627 aaKnown RBP11.16□□□□□ -0.62
CUTA-207ENST00000479249 TM4SF1P30408 202 aa11.15□□□□□ -0.62
CUTA-207ENST00000479249 PPARGC1BQ86YN6 1023 aaKnown RBP11.15□□□□□ -0.62
CUTA-207ENST00000479249 ATG3Q9NT62 314 aa11.15□□□□□ -0.62
CUTA-207ENST00000479249 PITPNM2Q9BZ72 1349 aa11.14□□□□□ -0.63
CUTA-207ENST00000479249 C21orf2O43822 256 aa11.14□□□□□ -0.63
CUTA-207ENST00000479249 CIAPIN1Q6FI81 312 aa11.14□□□□□ -0.63
CUTA-207ENST00000479249 INSRP06213 1382 aa11.14□□□□□ -0.63
CUTA-207ENST00000479249 HDGFL2Q7Z4V5 671 aaPredicted RBP11.13□□□□□ -0.63
CUTA-207ENST00000479249 HHIPL1Q96JK4 782 aa11.13□□□□□ -0.63
CUTA-207ENST00000479249 RBM42Q9BTD8 480 aaKnown RBP11.13□□□□□ -0.63
CUTA-207ENST00000479249 RNF123Q5XPI4 1314 aa11.12□□□□□ -0.63
CUTA-207ENST00000479249 SOGA3Q5TF21 947 aa11.12□□□□□ -0.63
CUTA-207ENST00000479249 SLC4A9Q96Q91 983 aa11.12□□□□□ -0.63
CUTA-207ENST00000479249 PDZRN3Q9UPQ7 1066 aa11.12□□□□□ -0.63
CUTA-207ENST00000479249 ZPR1O75312 459 aa11.11□□□□□ -0.63
CUTA-207ENST00000479249 CST9Q5W186 159 aa11.11□□□□□ -0.63
CUTA-207ENST00000479249 CTU1Q7Z7A3 348 aaKnown RBP11.11□□□□□ -0.63
CUTA-207ENST00000479249 SAPCD2Q86UD0 394 aa11.11□□□□□ -0.63
CUTA-207ENST00000479249 SAGE1Q9NXZ1 904 aa11.11□□□□□ -0.63
CUTA-207ENST00000479249 HPS5Q9UPZ3 1129 aa11.11□□□□□ -0.63
CUTA-207ENST00000479249 SPG7Q9UQ90 795 aa11.11□□□□□ -0.63
CUTA-207ENST00000479249 COL11A2P13942 1736 aaPredicted RBP11.11□□□□□ -0.63
CUTA-207ENST00000479249 TRIOBPQ9H2D6 2365 aa11.11□□□□□ -0.63
CUTA-207ENST00000479249 ZNF541Q9H0D2 1346 aa11.1□□□□□ -0.63
CUTA-207ENST00000479249 CACNA1SQ13698 1873 aa11.1□□□□□ -0.63
CUTA-207ENST00000479249 NOGQ13253 232 aa11.1□□□□□ -0.63
CUTA-207ENST00000479249 ZNF622Q969S3 477 aaKnown RBP eCLIP11.1□□□□□ -0.63
CUTA-207ENST00000479249 ARFGEF2Q9Y6D5 1785 aa11.1□□□□□ -0.63
CUTA-207ENST00000479249 ANKRD31Q8N7Z5 1873 aa11.09□□□□□ -0.63
CUTA-207ENST00000479249 CARMIL3Q8ND23 1372 aa11.09□□□□□ -0.63
CUTA-207ENST00000479249 CRKLP46109 303 aaKnown RBP11.09□□□□□ -0.63
CUTA-207ENST00000479249 FMR1Q06787 632 aaKnown RBP eCLIP11.09□□□□□ -0.63
CUTA-207ENST00000479249 AKAP4Q5JQC9 854 aa11.09□□□□□ -0.63
CUTA-207ENST00000479249 COG3Q96JB2 828 aa11.09□□□□□ -0.63
CUTA-207ENST00000479249 SERPINB2P05120 415 aa11.08□□□□□ -0.64
CUTA-207ENST00000479249 NFIXQ14938 502 aa11.08□□□□□ -0.64
CUTA-207ENST00000479249 PKN2Q16513 984 aaKnown RBP11.08□□□□□ -0.64
CUTA-207ENST00000479249 USPL1Q5W0Q7 1092 aa11.08□□□□□ -0.64
CUTA-207ENST00000479249 AKAP11Q9UKA4 1901 aa11.07□□□□□ -0.64
CUTA-207ENST00000479249 CEP290O15078 2479 aa11.07□□□□□ -0.64
CUTA-207ENST00000479249 TRAF5O00463 557 aa11.07□□□□□ -0.64
CUTA-207ENST00000479249 MNX1P50219 401 aaPredicted RBP11.07□□□□□ -0.64
CUTA-207ENST00000479249 GPC2Q8N158 579 aa11.07□□□□□ -0.64
CUTA-207ENST00000479249 TERF2IPQ9NYB0 399 aa11.07□□□□□ -0.64
CUTA-207ENST00000479249 SLX4Q8IY92 1834 aa11.07□□□□□ -0.64
CUTA-207ENST00000479249 A0A1W2PP64 1363 aa11.06□□□□□ -0.64
CUTA-207ENST00000479249 LMOD1P29536 600 aaPredicted RBP11.06□□□□□ -0.64
CUTA-207ENST00000479249 PDE6BP35913 854 aa11.06□□□□□ -0.64
CUTA-207ENST00000479249 BICDL1Q6ZP65 573 aa11.06□□□□□ -0.64
CUTA-207ENST00000479249 IFNL2Q8IZJ0 200 aa11.06□□□□□ -0.64
CUTA-207ENST00000479249 TMC1Q8TDI8 760 aa11.06□□□□□ -0.64
CUTA-207ENST00000479249 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.06□□□□□ -0.64
CUTA-207ENST00000479249 RANBP2P49792 3224 aaKnown RBP11.06□□□□□ -0.64
CUTA-207ENST00000479249 TJP1Q07157 1748 aa11.06□□□□□ -0.64
CUTA-207ENST00000479249 UNC80Q8N2C7 3258 aa11.06□□□□□ -0.64
CUTA-207ENST00000479249 BCORQ6W2J9 1755 aa11.05□□□□□ -0.64
CUTA-207ENST00000479249 CELF2O95319 508 aaKnown RBP11.05□□□□□ -0.64
CUTA-207ENST00000479249 PHKG2P15735 406 aa11.05□□□□□ -0.64
CUTA-207ENST00000479249 CNKSR1Q969H4 720 aa11.05□□□□□ -0.64
CUTA-207ENST00000479249 SCN11AQ9UI33 1791 aa11.05□□□□□ -0.64
CUTA-207ENST00000479249 NCAPD2Q15021 1401 aa11.04□□□□□ -0.64
CUTA-207ENST00000479249 FBLN1P23142 703 aa11.04□□□□□ -0.64
CUTA-207ENST00000479249 RRS1Q15050 365 aaKnown RBP11.04□□□□□ -0.64
CUTA-207ENST00000479249 PRPF40BQ6NWY9 871 aaKnown RBP11.04□□□□□ -0.64
CUTA-207ENST00000479249 BRIP1Q9BX63 1249 aa11.04□□□□□ -0.64
CUTA-207ENST00000479249 COLQQ9Y215 455 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms