RNA–Protein interactions for RNA: ENST00000479070.5

CREM-231, Transcript of cAMP responsive element modulator, human

TSL 5 BASIC

Gene CREM, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CREM-231	ENST00000479070	RNMT	O43148	476 aa	Known RBP	11.3	□□□□□ -0.6
CREM-231	ENST00000479070	MMP10	P09238	476 aa		11.3	□□□□□ -0.6
CREM-231	ENST00000479070	SPDYE6	P0CI01	402 aa		11.3	□□□□□ -0.6
CREM-231	ENST00000479070	CRKL	P46109	303 aa	Known RBP	11.3	□□□□□ -0.6
CREM-231	ENST00000479070	SLC39A6	Q13433	755 aa		11.3	□□□□□ -0.6
CREM-231	ENST00000479070	SPDYE2	Q495Y8	402 aa		11.3	□□□□□ -0.6
CREM-231	ENST00000479070	TRAPPC3L	Q5T215	181 aa		11.3	□□□□□ -0.6
CREM-231	ENST00000479070	ARHGEF1	Q92888	912 aa	Known RBP	11.3	□□□□□ -0.6
CREM-231	ENST00000479070	SLC52A2	Q9HAB3	445 aa		11.3	□□□□□ -0.6
CREM-231	ENST00000479070	CD2AP	Q9Y5K6	639 aa		11.3	□□□□□ -0.6
CREM-231	ENST00000479070	DLG5	Q8TDM6	1919 aa		11.3	□□□□□ -0.6
CREM-231	ENST00000479070	PXDNL	A1KZ92	1463 aa		11.3	□□□□□ -0.6
CREM-231	ENST00000479070	C10orf71	Q711Q0	1435 aa		11.29	□□□□□ -0.6
CREM-231	ENST00000479070	DNAJC10	Q8IXB1	793 aa		11.29	□□□□□ -0.6
CREM-231	ENST00000479070	SRP68	Q9UHB9	627 aa	Known RBP	11.29	□□□□□ -0.6
CREM-231	ENST00000479070	SCN7A	Q01118	1682 aa		11.28	□□□□□ -0.6
CREM-231	ENST00000479070	RPS6KA4	O75676	772 aa		11.28	□□□□□ -0.6
CREM-231	ENST00000479070	GYS1	P13807	737 aa		11.28	□□□□□ -0.6
CREM-231	ENST00000479070	RC3H1	Q5TC82	1133 aa	Known RBP	11.28	□□□□□ -0.6
CREM-231	ENST00000479070	ARFGEF1	Q9Y6D6	1849 aa		11.28	□□□□□ -0.6
CREM-231	ENST00000479070	RFC4	P35249	363 aa		11.27	□□□□□ -0.61
CREM-231	ENST00000479070	INTS5	Q6P9B9	1019 aa	Known RBP	11.27	□□□□□ -0.61
CREM-231	ENST00000479070	GRIN3B	O60391	1043 aa		11.26	□□□□□ -0.61
CREM-231	ENST00000479070	PPP2R1A	P30153	589 aa		11.26	□□□□□ -0.61
CREM-231	ENST00000479070	PRKAR2B	P31323	418 aa		11.26	□□□□□ -0.61
CREM-231	ENST00000479070	USP42	Q9H9J4	1324 aa	Known RBP	11.26	□□□□□ -0.61
CREM-231	ENST00000479070	NRXN2	Q9P2S2	1712 aa		11.26	□□□□□ -0.61
CREM-231	ENST00000479070	BCOR	Q6W2J9	1755 aa		11.26	□□□□□ -0.61
CREM-231	ENST00000479070	DLEC1	Q9Y238	1755 aa		11.26	□□□□□ -0.61
CREM-231	ENST00000479070	ATP10D	Q9P241	1426 aa		11.26	□□□□□ -0.61
CREM-231	ENST00000479070	FKBP8	Q14318	412 aa		11.25	□□□□□ -0.61
CREM-231	ENST00000479070	PHACTR3	Q96KR7	559 aa		11.25	□□□□□ -0.61
CREM-231	ENST00000479070	CFAP53	Q96M91	514 aa		11.25	□□□□□ -0.61
CREM-231	ENST00000479070	RSPH6A	Q9H0K4	717 aa		11.25	□□□□□ -0.61
CREM-231	ENST00000479070	CCDC87	Q9NVE4	849 aa		11.25	□□□□□ -0.61
CREM-231	ENST00000479070	ZBTB1	Q9Y2K1	713 aa		11.25	□□□□□ -0.61
CREM-231	ENST00000479070	SOS1	Q07889	1333 aa	Predicted RBP	11.25	□□□□□ -0.61
CREM-231	ENST00000479070	COL15A1	P39059	1388 aa		11.25	□□□□□ -0.61
CREM-231	ENST00000479070	CACNA1S	Q13698	1873 aa		11.24	□□□□□ -0.61
CREM-231	ENST00000479070	GNAT3	A8MTJ3	354 aa		11.24	□□□□□ -0.61
CREM-231	ENST00000479070	CYP19A1	P11511	503 aa	Predicted RBP	11.24	□□□□□ -0.61
CREM-231	ENST00000479070	DDR1	Q08345	913 aa		11.24	□□□□□ -0.61
CREM-231	ENST00000479070	NLGN1	Q8N2Q7	840 aa		11.24	□□□□□ -0.61
CREM-231	ENST00000479070	IL17RE	Q8NFR9	667 aa		11.24	□□□□□ -0.61
CREM-231	ENST00000479070	GAS2L2	Q8NHY3	880 aa		11.24	□□□□□ -0.61
CREM-231	ENST00000479070	LAMB4	A4D0S4	1761 aa		11.23	□□□□□ -0.61
CREM-231	ENST00000479070	ANKRD31	Q8N7Z5	1873 aa		11.23	□□□□□ -0.61
CREM-231	ENST00000479070	POTEB2	H3BUK9	544 aa		11.23	□□□□□ -0.61
CREM-231	ENST00000479070	TEF	Q10587	303 aa		11.23	□□□□□ -0.61
CREM-231	ENST00000479070	USPL1	Q5W0Q7	1092 aa		11.23	□□□□□ -0.61
CREM-231	ENST00000479070	PARP3	Q9Y6F1	533 aa		11.23	□□□□□ -0.61
CREM-231	ENST00000479070	ADCY9	O60503	1353 aa		11.23	□□□□□ -0.61
CREM-231	ENST00000479070	COL11A2	P13942	1736 aa	Predicted RBP	11.23	□□□□□ -0.61
CREM-231	ENST00000479070	KDM3B	Q7LBC6	1761 aa		11.23	□□□□□ -0.61
CREM-231	ENST00000479070		A0A0G2JLW4	131 aa		11.22	□□□□□ -0.61
CREM-231	ENST00000479070	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.22	□□□□□ -0.61
CREM-231	ENST00000479070	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
CREM-231	ENST00000479070	TTC5	Q8N0Z6	440 aa		11.22	□□□□□ -0.61
CREM-231	ENST00000479070	CEMIP	Q8WUJ3	1361 aa		11.22	□□□□□ -0.61
CREM-231	ENST00000479070	HEG1	Q9ULI3	1381 aa		11.21	□□□□□ -0.61
CREM-231	ENST00000479070	KCNQ3	O43525	872 aa		11.21	□□□□□ -0.61
CREM-231	ENST00000479070	DPEP1	P16444	411 aa		11.21	□□□□□ -0.61
CREM-231	ENST00000479070	CANX	P27824	592 aa	Known RBP	11.21	□□□□□ -0.61
CREM-231	ENST00000479070	ZNF496	Q96IT1	587 aa	Predicted RBP	11.21	□□□□□ -0.61
CREM-231	ENST00000479070	BCS1L	Q9Y276	419 aa		11.21	□□□□□ -0.61
CREM-231	ENST00000479070	POLRMT	O00411	1230 aa	Known RBP	11.2	□□□□□ -0.62
CREM-231	ENST00000479070	ZPR1	O75312	459 aa		11.2	□□□□□ -0.62
CREM-231	ENST00000479070	GIGYF1	O75420	1035 aa	Predicted RBP	11.2	□□□□□ -0.62
CREM-231	ENST00000479070	CD44	P16070	742 aa	Known RBP	11.2	□□□□□ -0.62
CREM-231	ENST00000479070	ZNF790	Q6PG37	636 aa		11.2	□□□□□ -0.62
CREM-231	ENST00000479070	VSIG10	Q8N0Z9	540 aa		11.2	□□□□□ -0.62
CREM-231	ENST00000479070	ZNF526	Q8TF50	670 aa	Predicted RBP	11.2	□□□□□ -0.62
CREM-231	ENST00000479070	NUDC	Q9Y266	331 aa		11.2	□□□□□ -0.62
CREM-231	ENST00000479070	SBF1	O95248	1867 aa		11.2	□□□□□ -0.62
CREM-231	ENST00000479070	CEP350	Q5VT06	3117 aa		11.2	□□□□□ -0.62
CREM-231	ENST00000479070	CCDC88A	Q3V6T2	1871 aa		11.19	□□□□□ -0.62
CREM-231	ENST00000479070	CARMIL3	Q8ND23	1372 aa		11.19	□□□□□ -0.62
CREM-231	ENST00000479070	ZEB1	P37275	1124 aa	Predicted RBP	11.19	□□□□□ -0.62
CREM-231	ENST00000479070	TGFB2	P61812	414 aa		11.19	□□□□□ -0.62
CREM-231	ENST00000479070	DCTN1	Q14203	1278 aa		11.19	□□□□□ -0.62
CREM-231	ENST00000479070	MCM10	Q7L590	875 aa		11.19	□□□□□ -0.62
CREM-231	ENST00000479070	DCBLD2	Q96PD2	775 aa		11.19	□□□□□ -0.62
CREM-231	ENST00000479070	BCL2L12	Q9HB09	334 aa		11.19	□□□□□ -0.62
CREM-231	ENST00000479070	NARF	Q9UHQ1	456 aa		11.19	□□□□□ -0.62
CREM-231	ENST00000479070	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.19	□□□□□ -0.62
CREM-231	ENST00000479070	BTBD11	A6QL63	1104 aa		11.18	□□□□□ -0.62
CREM-231	ENST00000479070	KCNA3	P22001	575 aa		11.18	□□□□□ -0.62
CREM-231	ENST00000479070	TM4SF1	P30408	202 aa		11.18	□□□□□ -0.62
CREM-231	ENST00000479070	CHRNA5	P30532	468 aa		11.18	□□□□□ -0.62
CREM-231	ENST00000479070	PIP4K2A	P48426	406 aa	Predicted RBP	11.18	□□□□□ -0.62
CREM-231	ENST00000479070	C1QTNF8	P60827	252 aa		11.18	□□□□□ -0.62
CREM-231	ENST00000479070	NFIX	Q14938	502 aa		11.18	□□□□□ -0.62
CREM-231	ENST00000479070	PCDH10	Q9P2E7	1040 aa		11.18	□□□□□ -0.62
CREM-231	ENST00000479070	TIAM2	Q8IVF5	1701 aa		11.18	□□□□□ -0.62
CREM-231	ENST00000479070	SENP3-EIF4A1	A0A087X0R7	540 aa		11.17	□□□□□ -0.62
CREM-231	ENST00000479070	PRAMEF22	A3QJZ6	481 aa		11.17	□□□□□ -0.62
CREM-231	ENST00000479070	FCHSD2	O94868	740 aa		11.17	□□□□□ -0.62
CREM-231	ENST00000479070	FMNL2	Q96PY5	1086 aa		11.17	□□□□□ -0.62
CREM-231	ENST00000479070	STARD3NL	O95772	234 aa		11.16	□□□□□ -0.62
CREM-231	ENST00000479070	A1BG	P04217	495 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms