RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 SENP2Q9HC62 589 aa9.53□□□□□ -0.88
HOXB3-209ENST00000478644 EFCAB6Q5THR3 1501 aa9.52□□□□□ -0.88
HOXB3-209ENST00000478644 C11orf95C9JLR9 678 aaPredicted RBP9.52□□□□□ -0.89
HOXB3-209ENST00000478644 SOCS7O14512 581 aa9.52□□□□□ -0.89
HOXB3-209ENST00000478644 NOS1P29475 1434 aa9.52□□□□□ -0.89
HOXB3-209ENST00000478644 NNTQ13423 1086 aa9.52□□□□□ -0.89
HOXB3-209ENST00000478644 TRIM47Q96LD4 638 aa9.52□□□□□ -0.89
HOXB3-209ENST00000478644 ZC3H4Q9UPT8 1303 aaKnown RBP9.52□□□□□ -0.89
HOXB3-209ENST00000478644 CAPN5O15484 640 aaPredicted RBP9.51□□□□□ -0.89
HOXB3-209ENST00000478644 KCNA6P17658 529 aa9.51□□□□□ -0.89
HOXB3-209ENST00000478644 LTKP29376 864 aa9.51□□□□□ -0.89
HOXB3-209ENST00000478644 GRM5P41594 1212 aa9.51□□□□□ -0.89
HOXB3-209ENST00000478644 NR5A1Q13285 461 aa9.51□□□□□ -0.89
HOXB3-209ENST00000478644 PDXDC2PQ6P474 469 aa9.51□□□□□ -0.89
HOXB3-209ENST00000478644 KIFC2Q96AC6 838 aa9.51□□□□□ -0.89
HOXB3-209ENST00000478644 FKBPLQ9UIM3 349 aa9.51□□□□□ -0.89
HOXB3-209ENST00000478644 MAP4K5Q9Y4K4 846 aa9.51□□□□□ -0.89
HOXB3-209ENST00000478644 ACIN1Q9UKV3 1341 aaKnown RBP9.51□□□□□ -0.89
HOXB3-209ENST00000478644 NCOA3Q9Y6Q9 1424 aa9.5□□□□□ -0.89
HOXB3-209ENST00000478644 RFC5P40937 340 aa9.5□□□□□ -0.89
HOXB3-209ENST00000478644 PIP4K2BP78356 416 aa9.5□□□□□ -0.89
HOXB3-209ENST00000478644 AGERQ15109 404 aa9.5□□□□□ -0.89
HOXB3-209ENST00000478644 LRRC7Q96NW7 1537 aa9.5□□□□□ -0.89
HOXB3-209ENST00000478644 PCMTD1Q96MG8 357 aaPredicted RBP9.49□□□□□ -0.89
HOXB3-209ENST00000478644 PIK3C2BO00750 1634 aa9.49□□□□□ -0.89
HOXB3-209ENST00000478644 AP1G2O75843 785 aa9.48□□□□□ -0.89
HOXB3-209ENST00000478644 TIMP2P16035 220 aa9.48□□□□□ -0.89
HOXB3-209ENST00000478644 HSPA1LP34931 641 aa9.48□□□□□ -0.89
HOXB3-209ENST00000478644 NR6A1Q15406 480 aa9.48□□□□□ -0.89
HOXB3-209ENST00000478644 LCE2AQ5TA79 106 aaPredicted RBP9.48□□□□□ -0.89
HOXB3-209ENST00000478644 TRIM46Q7Z4K8 759 aa9.48□□□□□ -0.89
HOXB3-209ENST00000478644 IL27Q8NEV9 243 aa9.48□□□□□ -0.89
HOXB3-209ENST00000478644 TET3O43151 1660 aa9.48□□□□□ -0.89
HOXB3-209ENST00000478644 PIK3R4Q99570 1358 aa9.48□□□□□ -0.89
HOXB3-209ENST00000478644 FAM135BQ49AJ0 1406 aa9.48□□□□□ -0.89
HOXB3-209ENST00000478644 ADGRB3O60242 1522 aa9.47□□□□□ -0.89
HOXB3-209ENST00000478644 CFAP65Q6ZU64 1925 aaKnown RBP9.47□□□□□ -0.89
HOXB3-209ENST00000478644 PPP1R15AO75807 674 aaPredicted RBP9.47□□□□□ -0.89
HOXB3-209ENST00000478644 TMEM259Q4ZIN3 620 aa9.47□□□□□ -0.89
HOXB3-209ENST00000478644 TBX22Q9Y458 520 aa9.47□□□□□ -0.89
HOXB3-209ENST00000478644 GPSM3Q9Y4H4 160 aa9.47□□□□□ -0.89
HOXB3-209ENST00000478644 PLEKHG1Q9ULL1 1385 aa9.47□□□□□ -0.89
HOXB3-209ENST00000478644 NKTRP30414 1462 aaKnown RBP9.47□□□□□ -0.89
HOXB3-209ENST00000478644 GCC2Q8IWJ2 1684 aa9.46□□□□□ -0.89
HOXB3-209ENST00000478644 SNRPBP14678 240 aaKnown RBP9.46□□□□□ -0.9
HOXB3-209ENST00000478644 PROSER2Q86WR7 435 aaPredicted RBP9.46□□□□□ -0.9
HOXB3-209ENST00000478644 UNC13BO14795 1591 aa9.46□□□□□ -0.9
HOXB3-209ENST00000478644 NR3C2P08235 984 aa9.45□□□□□ -0.9
HOXB3-209ENST00000478644 USP17L8P0C7I0 530 aa9.45□□□□□ -0.9
HOXB3-209ENST00000478644 TMEM132AQ24JP5 1023 aa9.45□□□□□ -0.9
HOXB3-209ENST00000478644 ERFEQ4G0M1 354 aa9.45□□□□□ -0.9
HOXB3-209ENST00000478644 TREML4Q6UXN2 200 aa9.45□□□□□ -0.9
HOXB3-209ENST00000478644 NUP155O75694 1391 aa9.45□□□□□ -0.9
HOXB3-209ENST00000478644 WDR4P57081 412 aaKnown RBP9.44□□□□□ -0.9
HOXB3-209ENST00000478644 ARID5BQ14865 1188 aa9.44□□□□□ -0.9
HOXB3-209ENST00000478644 PPARGC1BQ86YN6 1023 aaKnown RBP9.44□□□□□ -0.9
HOXB3-209ENST00000478644 HMX1Q9NP08 348 aaPredicted RBP9.44□□□□□ -0.9
HOXB3-209ENST00000478644 MSH6P52701 1360 aa9.44□□□□□ -0.9
HOXB3-209ENST00000478644 DIP2AQ14689 1571 aa9.43□□□□□ -0.9
HOXB3-209ENST00000478644 RIMS2Q9UQ26 1411 aa9.43□□□□□ -0.9
HOXB3-209ENST00000478644 EPS8L1Q8TE68 723 aa9.43□□□□□ -0.9
HOXB3-209ENST00000478644 OCSTAMPQ9BR26 566 aa9.43□□□□□ -0.9
HOXB3-209ENST00000478644 ARHGAP9Q9BRR9 750 aa9.43□□□□□ -0.9
HOXB3-209ENST00000478644 CDV3Q9UKY7 258 aaKnown RBP9.43□□□□□ -0.9
HOXB3-209ENST00000478644 IQGAP3Q86VI3 1631 aa9.42□□□□□ -0.9
HOXB3-209ENST00000478644 ZFYVE9O95405 1425 aa9.42□□□□□ -0.9
HOXB3-209ENST00000478644 TMEM94Q12767 1356 aa9.42□□□□□ -0.9
HOXB3-209ENST00000478644 MAGEB6P1A0A0J9YX57 407 aa9.42□□□□□ -0.9
HOXB3-209ENST00000478644 BMP1P13497 986 aa9.42□□□□□ -0.9
HOXB3-209ENST00000478644 PTK2Q05397 1052 aa9.42□□□□□ -0.9
HOXB3-209ENST00000478644 ILDR2Q71H61 639 aa9.42□□□□□ -0.9
HOXB3-209ENST00000478644 MRPL14Q6P1L8 145 aaKnown RBP9.41□□□□□ -0.9
HOXB3-209ENST00000478644 VASH1Q7L8A9 365 aaPredicted RBP9.41□□□□□ -0.9
HOXB3-209ENST00000478644 PNMA1Q8ND90 353 aa9.41□□□□□ -0.9
HOXB3-209ENST00000478644 ITPKCQ96DU7 683 aa9.41□□□□□ -0.9
HOXB3-209ENST00000478644 SLC26A8Q96RN1 970 aa9.41□□□□□ -0.9
HOXB3-209ENST00000478644 TMEM131LA2VDJ0 1609 aa9.41□□□□□ -0.9
HOXB3-209ENST00000478644 NWD1Q149M9 1564 aa9.41□□□□□ -0.9
HOXB3-209ENST00000478644 STRCP1A6NGW2 1772 aa9.4□□□□□ -0.9
HOXB3-209ENST00000478644 ZIC2O95409 532 aaPredicted RBP9.4□□□□□ -0.9
HOXB3-209ENST00000478644 NFX1Q12986 1120 aaKnown RBP9.4□□□□□ -0.9
HOXB3-209ENST00000478644 ZFP42Q96MM3 310 aa9.4□□□□□ -0.9
HOXB3-209ENST00000478644 TRIM34Q9BYJ4 488 aa9.4□□□□□ -0.9
HOXB3-209ENST00000478644 C19orf44Q9H6X5 657 aa9.4□□□□□ -0.9
HOXB3-209ENST00000478644 SLAIN2Q9P270 581 aa9.4□□□□□ -0.9
HOXB3-209ENST00000478644 RRBP1Q9P2E9 1410 aaKnown RBP9.39□□□□□ -0.91
HOXB3-209ENST00000478644 MED1Q15648 1581 aaPredicted RBP9.39□□□□□ -0.91
HOXB3-209ENST00000478644 ATF3P18847 181 aa9.39□□□□□ -0.91
HOXB3-209ENST00000478644 C14orf37Q86TY3 774 aa9.39□□□□□ -0.91
HOXB3-209ENST00000478644 BANK1Q8NDB2 785 aa9.39□□□□□ -0.91
HOXB3-209ENST00000478644 CARD14Q9BXL6 1004 aa9.39□□□□□ -0.91
HOXB3-209ENST00000478644 ZFAND3Q9H8U3 227 aa9.39□□□□□ -0.91
HOXB3-209ENST00000478644 ALKQ9UM73 1620 aa9.38□□□□□ -0.91
HOXB3-209ENST00000478644 RPGRIP1LQ68CZ1 1315 aa9.38□□□□□ -0.91
HOXB3-209ENST00000478644 FSHRP23945 695 aa9.38□□□□□ -0.91
HOXB3-209ENST00000478644 ZBTB33Q86T24 672 aa9.38□□□□□ -0.91
HOXB3-209ENST00000478644 CCDC116Q8IYX3 515 aa9.38□□□□□ -0.91
HOXB3-209ENST00000478644 EMILIN1Q9Y6C2 1016 aa9.38□□□□□ -0.91
HOXB3-209ENST00000478644 E9PCH4 1651 aa9.38□□□□□ -0.91
HOXB3-209ENST00000478644 CHD2O14647 1828 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms