RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 THUMPD2Q9BTF0 503 aaKnown RBP24.96■■□□□ 1.59
SREBF1-212ENST00000478616 BCL2L12Q9HB09 334 aa24.96■■□□□ 1.59
SREBF1-212ENST00000478616 BRCA1P38398 1863 aaKnown RBP24.96■■□□□ 1.59
SREBF1-212ENST00000478616 RFC4P35249 363 aa24.95■■□□□ 1.58
SREBF1-212ENST00000478616 TTC5Q8N0Z6 440 aa24.95■■□□□ 1.58
SREBF1-212ENST00000478616 NRXN2Q9P2S2 1712 aa24.95■■□□□ 1.58
SREBF1-212ENST00000478616 C10orf71Q711Q0 1435 aa24.95■■□□□ 1.58
SREBF1-212ENST00000478616 SCN7AQ01118 1682 aa24.94■■□□□ 1.58
SREBF1-212ENST00000478616 COL15A1P39059 1388 aa24.94■■□□□ 1.58
SREBF1-212ENST00000478616 DDR1Q08345 913 aa24.94■■□□□ 1.58
SREBF1-212ENST00000478616 NLGN1Q8N2Q7 840 aa24.94■■□□□ 1.58
SREBF1-212ENST00000478616 LAMB4A4D0S4 1761 aa24.93■■□□□ 1.58
SREBF1-212ENST00000478616 EIF5P55010 431 aaKnown RBP24.93■■□□□ 1.58
SREBF1-212ENST00000478616 MIS18AQ9NYP9 233 aa24.93■■□□□ 1.58
SREBF1-212ENST00000478616 RTF1Q92541 710 aaKnown RBP24.92■■□□□ 1.58
SREBF1-212ENST00000478616 FMNL2Q96PY5 1086 aa24.92■■□□□ 1.58
SREBF1-212ENST00000478616 USP16Q9Y5T5 823 aa24.92■■□□□ 1.58
SREBF1-212ENST00000478616 BCORQ6W2J9 1755 aa24.92■■□□□ 1.58
SREBF1-212ENST00000478616 PXDNLA1KZ92 1463 aa24.91■■□□□ 1.58
SREBF1-212ENST00000478616 A1BGP04217 495 aa24.9■■□□□ 1.58
SREBF1-212ENST00000478616 CANXP27824 592 aaKnown RBP24.9■■□□□ 1.58
SREBF1-212ENST00000478616 TM4SF1P30408 202 aa24.9■■□□□ 1.58
SREBF1-212ENST00000478616 USPL1Q5W0Q7 1092 aa24.9■■□□□ 1.58
SREBF1-212ENST00000478616 NARFQ9UHQ1 456 aa24.9■■□□□ 1.58
SREBF1-212ENST00000478616 TAF7Q15545 349 aaPredicted RBP24.89■■□□□ 1.58
SREBF1-212ENST00000478616 CCDC184Q52MB2 194 aa24.89■■□□□ 1.58
SREBF1-212ENST00000478616 CCDC146Q8IYE0 955 aa24.88■■□□□ 1.57
SREBF1-212ENST00000478616 ADAMTS8Q9UP79 889 aa24.88■■□□□ 1.57
SREBF1-212ENST00000478616 STARD3NLO95772 234 aa24.87■■□□□ 1.57
SREBF1-212ENST00000478616 TMPOP42166 694 aaKnown RBP24.87■■□□□ 1.57
SREBF1-212ENST00000478616 POLRMTO00411 1230 aaKnown RBP24.86■■□□□ 1.57
SREBF1-212ENST00000478616 PIP4K2AP48426 406 aaPredicted RBP24.86■■□□□ 1.57
SREBF1-212ENST00000478616 ZNF316A6NFI3 1004 aaPredicted RBP24.85■■□□□ 1.57
SREBF1-212ENST00000478616 NBPF26B4DH59 902 aa24.85■■□□□ 1.57
SREBF1-212ENST00000478616 YY1P25490 414 aa24.85■■□□□ 1.57
SREBF1-212ENST00000478616 NFIXQ14938 502 aa24.85■■□□□ 1.57
SREBF1-212ENST00000478616 GPR162Q16538 588 aa24.85■■□□□ 1.57
SREBF1-212ENST00000478616 NBPF10Q6P3W6 841 aaKnown RBP24.85■■□□□ 1.57
SREBF1-212ENST00000478616 NBPF15Q8N660 670 aa24.85■■□□□ 1.57
SREBF1-212ENST00000478616 TEX13AQ9BXU3 409 aaPredicted RBP24.85■■□□□ 1.57
SREBF1-212ENST00000478616 MAPK8IP3Q9UPT6 1336 aa24.85■■□□□ 1.57
SREBF1-212ENST00000478616 RRP7AQ9Y3A4 280 aaKnown RBP24.84■■□□□ 1.57
SREBF1-212ENST00000478616 ANKRD31Q8N7Z5 1873 aa24.83■■□□□ 1.57
SREBF1-212ENST00000478616 DCAF8L1A6NGE4 600 aa24.83■■□□□ 1.57
SREBF1-212ENST00000478616 IL6STP40189 918 aaPredicted RBP24.83■■□□□ 1.57
SREBF1-212ENST00000478616 RIPK4P57078 832 aa24.83■■□□□ 1.57
SREBF1-212ENST00000478616 WWC3Q9ULE0 1092 aa24.83■■□□□ 1.57
SREBF1-212ENST00000478616 TRIM35Q9UPQ4 493 aa24.83■■□□□ 1.57
SREBF1-212ENST00000478616 SNRPA1P09661 255 aaKnown RBP24.82■■□□□ 1.56
SREBF1-212ENST00000478616 KCNA3P22001 575 aa24.82■■□□□ 1.56
SREBF1-212ENST00000478616 EIF4A1P60842 406 aaKnown RBP24.82■■□□□ 1.56
SREBF1-212ENST00000478616 PELP1Q8IZL8 1130 aaKnown RBP24.82■■□□□ 1.56
SREBF1-212ENST00000478616 PNNQ9H307 717 aaKnown RBP24.82■■□□□ 1.56
SREBF1-212ENST00000478616 ZPR1O75312 459 aa24.81■■□□□ 1.56
SREBF1-212ENST00000478616 PARP3Q9Y6F1 533 aa24.81■■□□□ 1.56
SREBF1-212ENST00000478616 CAMTA2O94983 1202 aa24.8■■□□□ 1.56
SREBF1-212ENST00000478616 NEFMP07197 916 aa24.8■■□□□ 1.56
SREBF1-212ENST00000478616 TBC1D2BQ9UPU7 963 aa24.8■■□□□ 1.56
SREBF1-212ENST00000478616 DLEC1Q9Y238 1755 aa24.8■■□□□ 1.56
SREBF1-212ENST00000478616 A0A0G2JLW4 131 aa24.79■■□□□ 1.56
SREBF1-212ENST00000478616 GIGYF1O75420 1035 aaPredicted RBP24.79■■□□□ 1.56
SREBF1-212ENST00000478616 RUNDC1Q96C34 613 aa24.79■■□□□ 1.56
SREBF1-212ENST00000478616 ARFGEF1Q9Y6D6 1849 aa24.79■■□□□ 1.56
SREBF1-212ENST00000478616 CARMIL3Q8ND23 1372 aa24.79■■□□□ 1.56
SREBF1-212ENST00000478616 DPEP1P16444 411 aa24.78■■□□□ 1.56
SREBF1-212ENST00000478616 TGFB2P61812 414 aa24.77■■□□□ 1.56
SREBF1-212ENST00000478616 TBC1D9BQ66K14 1250 aa24.77■■□□□ 1.56
SREBF1-212ENST00000478616 COL11A2P13942 1736 aaPredicted RBP24.75■■□□□ 1.55
SREBF1-212ENST00000478616 WDR43Q15061 677 aaKnown RBP eCLIP24.75■■□□□ 1.55
SREBF1-212ENST00000478616 PNISRQ8TF01 805 aaKnown RBP24.75■■□□□ 1.55
SREBF1-212ENST00000478616 A0A087WZG4 1122 aa24.74■■□□□ 1.55
SREBF1-212ENST00000478616 NEUROD2Q15784 382 aa24.74■■□□□ 1.55
SREBF1-212ENST00000478616 ZNF330Q9Y3S2 320 aaPredicted RBP24.74■■□□□ 1.55
SREBF1-212ENST00000478616 NUP98P52948 1817 aa24.74■■□□□ 1.55
SREBF1-212ENST00000478616 SERPINB2P05120 415 aa24.73■■□□□ 1.55
SREBF1-212ENST00000478616 GRIN3BO60391 1043 aa24.72■■□□□ 1.55
SREBF1-212ENST00000478616 CHRNA5P30532 468 aa24.72■■□□□ 1.55
SREBF1-212ENST00000478616 BICDL1Q6ZP65 573 aa24.71■■□□□ 1.55
SREBF1-212ENST00000478616 LRP10Q7Z4F1 713 aa24.71■■□□□ 1.55
SREBF1-212ENST00000478616 DZIP3Q86Y13 1208 aaKnown RBP24.71■■□□□ 1.55
SREBF1-212ENST00000478616 ZNF784Q8NCA9 323 aaPredicted RBP24.71■■□□□ 1.55
SREBF1-212ENST00000478616 KRT24Q2M2I5 525 aa24.7■■□□□ 1.54
SREBF1-212ENST00000478616 TSPYL4Q9UJ04 414 aa24.7■■□□□ 1.54
SREBF1-212ENST00000478616 CHL1O00533 1208 aa24.69■■□□□ 1.54
SREBF1-212ENST00000478616 APAF1O14727 1248 aa24.68■■□□□ 1.54
SREBF1-212ENST00000478616 PDIA6Q15084 440 aa24.68■■□□□ 1.54
SREBF1-212ENST00000478616 BABAM1Q9NWV8 329 aa24.68■■□□□ 1.54
SREBF1-212ENST00000478616 ADCY9O60503 1353 aa24.67■■□□□ 1.54
SREBF1-212ENST00000478616 LMOD3Q0VAK6 560 aa24.67■■□□□ 1.54
SREBF1-212ENST00000478616 HLFQ16534 295 aa24.67■■□□□ 1.54
SREBF1-212ENST00000478616 PRR5LQ6MZQ0 368 aa24.67■■□□□ 1.54
SREBF1-212ENST00000478616 CCDC24Q8N4L8 307 aa24.67■■□□□ 1.54
SREBF1-212ENST00000478616 SBF1O95248 1867 aa24.66■■□□□ 1.54
SREBF1-212ENST00000478616 PROSER3Q2NL68 480 aa24.65■■□□□ 1.54
SREBF1-212ENST00000478616 TTLL7Q6ZT98 887 aa24.65■■□□□ 1.54
SREBF1-212ENST00000478616 BCS1LQ9Y276 419 aa24.65■■□□□ 1.54
SREBF1-212ENST00000478616 ZNF853P0CG23 659 aa24.64■■□□□ 1.54
SREBF1-212ENST00000478616 CACNA1SQ13698 1873 aa24.63■■□□□ 1.53
SREBF1-212ENST00000478616 CLEC4GQ6UXB4 293 aa24.62■■□□□ 1.53
SREBF1-212ENST00000478616 TNRC6CQ9HCJ0 1690 aaKnown RBP24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms