RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 ZMIZ1Q9ULJ6 1067 aa10.18□□□□□ -0.78
CDK13-204ENST00000478563 DOLKQ9UPQ8 538 aa10.18□□□□□ -0.78
CDK13-204ENST00000478563 IGSF3O75054 1194 aa10.17□□□□□ -0.78
CDK13-204ENST00000478563 MYCP01106 439 aaPredicted RBP10.17□□□□□ -0.78
CDK13-204ENST00000478563 ELOAQ14241 798 aaKnown RBP10.17□□□□□ -0.78
CDK13-204ENST00000478563 BAG6P46379 1132 aa10.16□□□□□ -0.78
CDK13-204ENST00000478563 USP4Q13107 963 aa10.16□□□□□ -0.78
CDK13-204ENST00000478563 PODNQ7Z5L7 613 aa10.16□□□□□ -0.78
CDK13-204ENST00000478563 NEDD1Q8NHV4 660 aa10.16□□□□□ -0.78
CDK13-204ENST00000478563 ETNK1Q9HBU6 452 aa10.16□□□□□ -0.78
CDK13-204ENST00000478563 IGF1RP08069 1367 aa10.15□□□□□ -0.78
CDK13-204ENST00000478563 USP17L3A6NCW0 530 aa10.15□□□□□ -0.78
CDK13-204ENST00000478563 USP17L4A6NCW7 530 aa10.15□□□□□ -0.78
CDK13-204ENST00000478563 WASLO00401 505 aaPredicted RBP10.15□□□□□ -0.78
CDK13-204ENST00000478563 THBS1P07996 1170 aa10.15□□□□□ -0.78
CDK13-204ENST00000478563 BCRP11274 1271 aa10.15□□□□□ -0.78
CDK13-204ENST00000478563 SKIP12755 728 aa10.15□□□□□ -0.78
CDK13-204ENST00000478563 USP17L2Q6R6M4 530 aa10.15□□□□□ -0.78
CDK13-204ENST00000478563 USP17L1Q7RTZ2 530 aa10.15□□□□□ -0.78
CDK13-204ENST00000478563 GMCL1Q96IK5 515 aa10.15□□□□□ -0.78
CDK13-204ENST00000478563 ESF1Q9H501 851 aaKnown RBP10.15□□□□□ -0.78
CDK13-204ENST00000478563 MBIPQ9NS73 344 aa10.15□□□□□ -0.78
CDK13-204ENST00000478563 NOVA2Q9UNW9 492 aaKnown RBP10.15□□□□□ -0.78
CDK13-204ENST00000478563 GPR25O00155 361 aa10.14□□□□□ -0.79
CDK13-204ENST00000478563 TAS1R3Q7RTX0 852 aa10.14□□□□□ -0.79
CDK13-204ENST00000478563 ACDQ96AP0 544 aa10.14□□□□□ -0.79
CDK13-204ENST00000478563 LOC105371045A0A1W2PR82 267 aa10.13□□□□□ -0.79
CDK13-204ENST00000478563 USP17L5A8MUK1 530 aa10.13□□□□□ -0.79
CDK13-204ENST00000478563 SCNN1DP51172 638 aa10.13□□□□□ -0.79
CDK13-204ENST00000478563 OXLD1Q5BKU9 147 aa10.13□□□□□ -0.79
CDK13-204ENST00000478563 NFATC2IPQ8NCF5 419 aa10.13□□□□□ -0.79
CDK13-204ENST00000478563 CCER1Q8TC90 406 aaPredicted RBP10.13□□□□□ -0.79
CDK13-204ENST00000478563 TIMMDC1Q9NPL8 285 aa10.13□□□□□ -0.79
CDK13-204ENST00000478563 KRBA1A5PL33 1030 aa10.12□□□□□ -0.79
CDK13-204ENST00000478563 FURINP09958 794 aa10.12□□□□□ -0.79
CDK13-204ENST00000478563 TXNDC2Q86VQ3 553 aa10.12□□□□□ -0.79
CDK13-204ENST00000478563 DEPDC4Q8N2C3 294 aa10.12□□□□□ -0.79
CDK13-204ENST00000478563 PLPP7Q8NBV4 271 aa10.12□□□□□ -0.79
CDK13-204ENST00000478563 GAS2L1Q99501 681 aaPredicted RBP10.12□□□□□ -0.79
CDK13-204ENST00000478563 MAP7D1Q3KQU3 841 aa10.11□□□□□ -0.79
CDK13-204ENST00000478563 PHLDB3Q6NSJ2 640 aa10.11□□□□□ -0.79
CDK13-204ENST00000478563 RIPOR1Q6ZS17 1223 aa10.11□□□□□ -0.79
CDK13-204ENST00000478563 ZSCAN10Q96SZ4 725 aaPredicted RBP10.11□□□□□ -0.79
CDK13-204ENST00000478563 C4orf17Q53FE4 359 aa10.1□□□□□ -0.79
CDK13-204ENST00000478563 ESCO1Q5FWF5 840 aa10.1□□□□□ -0.79
CDK13-204ENST00000478563 KRTAP1-3Q8IUG1 177 aa10.1□□□□□ -0.79
CDK13-204ENST00000478563 PLEKHM2Q8IWE5 1019 aa10.1□□□□□ -0.79
CDK13-204ENST00000478563 USP17L15C9J2P7 530 aa10.09□□□□□ -0.79
CDK13-204ENST00000478563 USP17L10C9JJH3 530 aa10.09□□□□□ -0.79
CDK13-204ENST00000478563 USP17L13C9JLJ4 530 aa10.09□□□□□ -0.79
CDK13-204ENST00000478563 USP17L12C9JPN9 530 aa10.09□□□□□ -0.79
CDK13-204ENST00000478563 USP17L11C9JVI0 530 aa10.09□□□□□ -0.79
CDK13-204ENST00000478563 USP17L21D6R901 530 aa10.09□□□□□ -0.79
CDK13-204ENST00000478563 USP17L18D6R9N7 530 aa10.09□□□□□ -0.79
CDK13-204ENST00000478563 USP17L22D6RA61 530 aa10.09□□□□□ -0.79
CDK13-204ENST00000478563 USP17L17D6RBQ6 530 aa10.09□□□□□ -0.79
CDK13-204ENST00000478563 USP17L19D6RCP7 530 aa10.09□□□□□ -0.79
CDK13-204ENST00000478563 USP17L20D6RJB6 530 aa10.09□□□□□ -0.79
CDK13-204ENST00000478563 H7C1W4 665 aa10.09□□□□□ -0.79
CDK13-204ENST00000478563 F11P03951 625 aa10.09□□□□□ -0.79
CDK13-204ENST00000478563 USP17L24Q0WX57 530 aa10.09□□□□□ -0.79
CDK13-204ENST00000478563 UBAP2LQ14157 1087 aaKnown RBP10.09□□□□□ -0.79
CDK13-204ENST00000478563 CRTC2Q53ET0 693 aaPredicted RBP10.09□□□□□ -0.79
CDK13-204ENST00000478563 GTPBP3Q969Y2 492 aaKnown RBP10.09□□□□□ -0.79
CDK13-204ENST00000478563 UNCXA6NJT0 531 aa10.08□□□□□ -0.8
CDK13-204ENST00000478563 FAM196BA6NMK8 535 aa10.08□□□□□ -0.8
CDK13-204ENST00000478563 PHKA2P46019 1235 aa10.08□□□□□ -0.8
CDK13-204ENST00000478563 PPARGC1BQ86YN6 1023 aaKnown RBP10.08□□□□□ -0.8
CDK13-204ENST00000478563 SIRT1Q96EB6 747 aa10.08□□□□□ -0.8
CDK13-204ENST00000478563 MKRN1Q9UHC7 482 aaKnown RBP10.08□□□□□ -0.8
CDK13-204ENST00000478563 INHAP05111 366 aa10.07□□□□□ -0.8
CDK13-204ENST00000478563 SSFA2P28290 1259 aa10.07□□□□□ -0.8
CDK13-204ENST00000478563 ARID4AP29374 1257 aaPredicted RBP10.07□□□□□ -0.8
CDK13-204ENST00000478563 GDF10P55107 478 aa10.07□□□□□ -0.8
CDK13-204ENST00000478563 SNRPNP63162 240 aaKnown RBP10.07□□□□□ -0.8
CDK13-204ENST00000478563 SLAIN2Q9P270 581 aa10.07□□□□□ -0.8
CDK13-204ENST00000478563 PCDHGA11Q9Y5H2 935 aa10.07□□□□□ -0.8
CDK13-204ENST00000478563 A0A1B0GTH6 734 aa10.06□□□□□ -0.8
CDK13-204ENST00000478563 TMEM229AB2RXF0 380 aa10.06□□□□□ -0.8
CDK13-204ENST00000478563 RASA1P20936 1047 aa10.06□□□□□ -0.8
CDK13-204ENST00000478563 LARP1Q6PKG0 1096 aaKnown RBP10.06□□□□□ -0.8
CDK13-204ENST00000478563 ZNF295-AS1Q8N0V1 137 aa10.06□□□□□ -0.8
CDK13-204ENST00000478563 NUCKS1Q9H1E3 243 aaKnown RBP10.06□□□□□ -0.8
CDK13-204ENST00000478563 NCOA4Q13772 614 aa10.05□□□□□ -0.8
CDK13-204ENST00000478563 TLR1Q15399 786 aa10.05□□□□□ -0.8
CDK13-204ENST00000478563 TMEM214Q6NUQ4 689 aaKnown RBP10.05□□□□□ -0.8
CDK13-204ENST00000478563 FAM200AQ8TCP9 573 aa10.05□□□□□ -0.8
CDK13-204ENST00000478563 RHBDD1Q8TEB9 315 aa10.05□□□□□ -0.8
CDK13-204ENST00000478563 RBM47A0AV96 593 aaKnown RBP10.04□□□□□ -0.8
CDK13-204ENST00000478563 PTK7Q13308 1070 aa10.04□□□□□ -0.8
CDK13-204ENST00000478563 GPAMQ9HCL2 828 aa10.04□□□□□ -0.8
CDK13-204ENST00000478563 COL8A1P27658 744 aa10.03□□□□□ -0.8
CDK13-204ENST00000478563 MSX1P28360 303 aa10.03□□□□□ -0.8
CDK13-204ENST00000478563 FAM69CQ0P6D2 419 aa10.03□□□□□ -0.8
CDK13-204ENST00000478563 GNASQ5JWF2 1037 aa10.03□□□□□ -0.8
CDK13-204ENST00000478563 FOXR1Q6PIV2 292 aa10.03□□□□□ -0.8
CDK13-204ENST00000478563 SLC4A9Q96Q91 983 aa10.03□□□□□ -0.8
CDK13-204ENST00000478563 LRRC4BQ9NT99 713 aa10.03□□□□□ -0.8
CDK13-204ENST00000478563 OIP5O43482 229 aa10.02□□□□□ -0.81
CDK13-204ENST00000478563 SMTNP53814 917 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms