RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 B4GALNT3Q6L9W6 998 aa7.37□□□□□ -1.23
SMARCA1-204ENST00000478420 ZNF775Q96BV0 537 aaPredicted RBP7.37□□□□□ -1.23
SMARCA1-204ENST00000478420 ZNF232Q9UNY5 417 aa7.37□□□□□ -1.23
SMARCA1-204ENST00000478420 SERTM1A2A2V5 107 aa7.36□□□□□ -1.23
SMARCA1-204ENST00000478420 POTECB2RU33 542 aa7.36□□□□□ -1.23
SMARCA1-204ENST00000478420 NOS2P35228 1153 aa7.36□□□□□ -1.23
SMARCA1-204ENST00000478420 PLA2G4AP47712 749 aa7.36□□□□□ -1.23
SMARCA1-204ENST00000478420 TEAD4Q15561 434 aa7.36□□□□□ -1.23
SMARCA1-204ENST00000478420 OCLNQ16625 522 aa7.36□□□□□ -1.23
SMARCA1-204ENST00000478420 ZNF295-AS1Q8N0V1 137 aa7.36□□□□□ -1.23
SMARCA1-204ENST00000478420 L3MBTL2Q969R5 705 aa7.36□□□□□ -1.23
SMARCA1-204ENST00000478420 VTI1AQ96AJ9 217 aa7.36□□□□□ -1.23
SMARCA1-204ENST00000478420 TIMMDC1Q9NPL8 285 aa7.36□□□□□ -1.23
SMARCA1-204ENST00000478420 FOXO3O43524 673 aa7.35□□□□□ -1.23
SMARCA1-204ENST00000478420 PDIA4P13667 645 aaKnown RBP7.35□□□□□ -1.23
SMARCA1-204ENST00000478420 STAG2Q8N3U4 1231 aa7.35□□□□□ -1.23
SMARCA1-204ENST00000478420 AIDAQ96BJ3 306 aa7.35□□□□□ -1.23
SMARCA1-204ENST00000478420 CXXC1Q9P0U4 656 aaPredicted RBP7.35□□□□□ -1.23
SMARCA1-204ENST00000478420 SLAIN2Q9P270 581 aa7.35□□□□□ -1.23
SMARCA1-204ENST00000478420 A0A1B0GTH6 734 aa7.34□□□□□ -1.23
SMARCA1-204ENST00000478420 EML1O00423 815 aa7.34□□□□□ -1.23
SMARCA1-204ENST00000478420 SSFA2P28290 1259 aa7.34□□□□□ -1.23
SMARCA1-204ENST00000478420 PTSQ03393 145 aa7.34□□□□□ -1.23
SMARCA1-204ENST00000478420 NBPF1Q3BBV0 1214 aa7.34□□□□□ -1.23
SMARCA1-204ENST00000478420 ZDHHC1Q8WTX9 485 aa7.34□□□□□ -1.23
SMARCA1-204ENST00000478420 C2orf49Q9BVC5 232 aaPredicted RBP7.34□□□□□ -1.23
SMARCA1-204ENST00000478420 TRAIPQ9BWF2 469 aa7.34□□□□□ -1.23
SMARCA1-204ENST00000478420 PARP3Q9Y6F1 533 aa7.34□□□□□ -1.23
SMARCA1-204ENST00000478420 FKBP5Q13451 457 aaPredicted RBP7.33□□□□□ -1.24
SMARCA1-204ENST00000478420 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.33□□□□□ -1.24
SMARCA1-204ENST00000478420 DYRK1BQ9Y463 629 aa7.33□□□□□ -1.24
SMARCA1-204ENST00000478420 TATP17735 454 aaPredicted RBP7.32□□□□□ -1.24
SMARCA1-204ENST00000478420 HIRAP54198 1017 aaPredicted RBP7.32□□□□□ -1.24
SMARCA1-204ENST00000478420 POTEAQ6S8J7 498 aa7.32□□□□□ -1.24
SMARCA1-204ENST00000478420 C1orf216Q8TAB5 229 aa7.32□□□□□ -1.24
SMARCA1-204ENST00000478420 ZDHHC3Q9NYG2 299 aa7.32□□□□□ -1.24
SMARCA1-204ENST00000478420 SENP3-EIF4A1A0A087X0R7 540 aa7.31□□□□□ -1.24
SMARCA1-204ENST00000478420 SLC35F4A4IF30 521 aa7.31□□□□□ -1.24
SMARCA1-204ENST00000478420 PTCD1O75127 700 aaKnown RBP7.31□□□□□ -1.24
SMARCA1-204ENST00000478420 SH3PXD2AQ5TCZ1 1133 aa7.31□□□□□ -1.24
SMARCA1-204ENST00000478420 CCDC155Q8N6L0 562 aa7.31□□□□□ -1.24
SMARCA1-204ENST00000478420 GAS2L1Q99501 681 aaPredicted RBP7.31□□□□□ -1.24
SMARCA1-204ENST00000478420 MKNK1Q9BUB5 465 aa7.31□□□□□ -1.24
SMARCA1-204ENST00000478420 HCN4Q9Y3Q4 1203 aa7.31□□□□□ -1.24
SMARCA1-204ENST00000478420 BRD1O95696 1058 aa7.3□□□□□ -1.24
SMARCA1-204ENST00000478420 F11P03951 625 aa7.3□□□□□ -1.24
SMARCA1-204ENST00000478420 MSX1P28360 303 aa7.3□□□□□ -1.24
SMARCA1-204ENST00000478420 TXLNAP40222 546 aa7.3□□□□□ -1.24
SMARCA1-204ENST00000478420 COL26A1Q96A83 441 aa7.3□□□□□ -1.24
SMARCA1-204ENST00000478420 NGLY1Q96IV0 654 aa7.3□□□□□ -1.24
SMARCA1-204ENST00000478420 PHACTR1Q9C0D0 580 aa7.3□□□□□ -1.24
SMARCA1-204ENST00000478420 MTMR7Q9Y216 660 aa7.3□□□□□ -1.24
SMARCA1-204ENST00000478420 C1orf53Q5VUE5 145 aa7.29□□□□□ -1.24
SMARCA1-204ENST00000478420 PHLDB3Q6NSJ2 640 aa7.29□□□□□ -1.24
SMARCA1-204ENST00000478420 BICDL1Q6ZP65 573 aa7.29□□□□□ -1.24
SMARCA1-204ENST00000478420 RIPOR1Q6ZS17 1223 aa7.29□□□□□ -1.24
SMARCA1-204ENST00000478420 ALDH16A1Q8IZ83 802 aa7.29□□□□□ -1.24
SMARCA1-204ENST00000478420 PGBD3Q8N328 593 aa7.29□□□□□ -1.24
SMARCA1-204ENST00000478420 GPAMQ9HCL2 828 aa7.29□□□□□ -1.24
SMARCA1-204ENST00000478420 ATP4AP20648 1035 aa7.28□□□□□ -1.24
SMARCA1-204ENST00000478420 ARSJQ5FYB0 599 aaPredicted RBP7.28□□□□□ -1.24
SMARCA1-204ENST00000478420 H7C1W4 665 aa7.27□□□□□ -1.25
SMARCA1-204ENST00000478420 PPFIA3O75145 1194 aa7.27□□□□□ -1.25
SMARCA1-204ENST00000478420 ARID4AP29374 1257 aaPredicted RBP7.27□□□□□ -1.25
SMARCA1-204ENST00000478420 RTN1Q16799 776 aa7.27□□□□□ -1.25
SMARCA1-204ENST00000478420 RHPN1Q8TCX5 695 aa7.27□□□□□ -1.25
SMARCA1-204ENST00000478420 RUBCNLQ9H714 662 aa7.27□□□□□ -1.25
SMARCA1-204ENST00000478420 NXF1Q9UBU9 619 aaKnown RBP7.27□□□□□ -1.25
SMARCA1-204ENST00000478420 GPC6Q9Y625 555 aaPredicted RBP7.27□□□□□ -1.25
SMARCA1-204ENST00000478420 ITGA6P23229 1130 aa7.26□□□□□ -1.25
SMARCA1-204ENST00000478420 SCNN1AP37088 669 aa7.26□□□□□ -1.25
SMARCA1-204ENST00000478420 NAA30Q147X3 362 aaPredicted RBP7.26□□□□□ -1.25
SMARCA1-204ENST00000478420 EFHC2Q5JST6 749 aa7.26□□□□□ -1.25
SMARCA1-204ENST00000478420 C16orf46Q6P387 395 aa7.26□□□□□ -1.25
SMARCA1-204ENST00000478420 CAPN12Q6ZSI9 719 aa7.26□□□□□ -1.25
SMARCA1-204ENST00000478420 MYO19Q96H55 970 aa7.26□□□□□ -1.25
SMARCA1-204ENST00000478420 ZIC5Q96T25 663 aa7.26□□□□□ -1.25
SMARCA1-204ENST00000478420 CRISPLD1Q9H336 500 aa7.26□□□□□ -1.25
SMARCA1-204ENST00000478420 QTRT2Q9H974 415 aaKnown RBP7.26□□□□□ -1.25
SMARCA1-204ENST00000478420 NEUROD4Q9HD90 331 aa7.26□□□□□ -1.25
SMARCA1-204ENST00000478420 SEPT3Q9UH03 358 aa7.26□□□□□ -1.25
SMARCA1-204ENST00000478420 GJA3Q9Y6H8 435 aa7.26□□□□□ -1.25
SMARCA1-204ENST00000478420 A0A1W2PNR3 127 aa7.25□□□□□ -1.25
SMARCA1-204ENST00000478420 PATL2C9JE40 543 aaKnown RBP7.25□□□□□ -1.25
SMARCA1-204ENST00000478420 LBRQ14739 615 aaKnown RBP7.25□□□□□ -1.25
SMARCA1-204ENST00000478420 HIF1AQ16665 826 aa7.25□□□□□ -1.25
SMARCA1-204ENST00000478420 KCTD17Q8N5Z5 321 aa7.25□□□□□ -1.25
SMARCA1-204ENST00000478420 GMCL1Q96IK5 515 aa7.25□□□□□ -1.25
SMARCA1-204ENST00000478420 KCNA1Q09470 495 aa7.24□□□□□ -1.25
SMARCA1-204ENST00000478420 AEBP1Q8IUX7 1158 aa7.24□□□□□ -1.25
SMARCA1-204ENST00000478420 NPAS3Q8IXF0 933 aa7.24□□□□□ -1.25
SMARCA1-204ENST00000478420 TRIM22Q8IYM9 498 aa7.24□□□□□ -1.25
SMARCA1-204ENST00000478420 CCER1Q8TC90 406 aaPredicted RBP7.24□□□□□ -1.25
SMARCA1-204ENST00000478420 C7orf43Q8WVR3 580 aa7.24□□□□□ -1.25
SMARCA1-204ENST00000478420 NUCKS1Q9H1E3 243 aaKnown RBP7.24□□□□□ -1.25
SMARCA1-204ENST00000478420 ANKIB1Q9P2G1 1089 aa7.24□□□□□ -1.25
SMARCA1-204ENST00000478420 CDC14CA4D256 554 aa7.23□□□□□ -1.25
SMARCA1-204ENST00000478420 DGKZQ13574 1117 aa7.23□□□□□ -1.25
SMARCA1-204ENST00000478420 DBN1Q16643 649 aa7.23□□□□□ -1.25
SMARCA1-204ENST00000478420 C11orf91Q3C1V1 193 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms