RNA–Protein interactions for RNA: ENST00000478264.1

PLOD3-213, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 663 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-213ENST00000478264 AK7Q96M32 723 aa23.54■■□□□ 1.36
PLOD3-213ENST00000478264 YTHDC1Q96MU7 727 aaKnown RBP23.54■■□□□ 1.36
PLOD3-213ENST00000478264 ANO8Q9HCE9 1232 aaPredicted RBP23.54■■□□□ 1.36
PLOD3-213ENST00000478264 STK32BQ9NY57 414 aa23.54■■□□□ 1.36
PLOD3-213ENST00000478264 USP16Q9Y5T5 823 aa23.54■■□□□ 1.36
PLOD3-213ENST00000478264 CRKLP46109 303 aaKnown RBP23.53■■□□□ 1.36
PLOD3-213ENST00000478264 ZNF827Q17R98 1081 aa23.53■■□□□ 1.36
PLOD3-213ENST00000478264 DUSP27Q5VZP5 1158 aa23.53■■□□□ 1.36
PLOD3-213ENST00000478264 TRMT2AQ8IZ69 625 aaKnown RBP23.53■■□□□ 1.36
PLOD3-213ENST00000478264 C8orf58Q8NAV2 365 aa23.53■■□□□ 1.36
PLOD3-213ENST00000478264 EXOSC9Q06265 439 aaKnown RBP23.52■■□□□ 1.36
PLOD3-213ENST00000478264 CCDC87Q9NVE4 849 aa23.52■■□□□ 1.36
PLOD3-213ENST00000478264 SLC15A2Q16348 729 aa23.51■■□□□ 1.35
PLOD3-213ENST00000478264 TWISTNBQ3B726 338 aaPredicted RBP23.5■■□□□ 1.35
PLOD3-213ENST00000478264 INTS5Q6P9B9 1019 aaKnown RBP23.5■■□□□ 1.35
PLOD3-213ENST00000478264 TSPYL6Q8N831 410 aa23.5■■□□□ 1.35
PLOD3-213ENST00000478264 ERBB4Q15303 1308 aa23.5■■□□□ 1.35
PLOD3-213ENST00000478264 MYH14Q7Z406 1995 aaKnown RBP23.49■■□□□ 1.35
PLOD3-213ENST00000478264 ELL2O00472 640 aaPredicted RBP23.49■■□□□ 1.35
PLOD3-213ENST00000478264 GNPATO15228 680 aa23.49■■□□□ 1.35
PLOD3-213ENST00000478264 HDGFL1Q5TGJ6 251 aa23.49■■□□□ 1.35
PLOD3-213ENST00000478264 CHMP4AQ9BY43 222 aa23.49■■□□□ 1.35
PLOD3-213ENST00000478264 ZBTB1Q9Y2K1 713 aa23.49■■□□□ 1.35
PLOD3-213ENST00000478264 QSER1Q2KHR3 1735 aa23.49■■□□□ 1.35
PLOD3-213ENST00000478264 UBR3Q6ZT12 1888 aa23.49■■□□□ 1.35
PLOD3-213ENST00000478264 TUBGCP6Q96RT7 1819 aa23.48■■□□□ 1.35
PLOD3-213ENST00000478264 EIF2S2P20042 333 aaKnown RBP23.48■■□□□ 1.35
PLOD3-213ENST00000478264 TFCP2L1Q9NZI6 479 aa23.48■■□□□ 1.35
PLOD3-213ENST00000478264 A1BGP04217 495 aa23.47■■□□□ 1.35
PLOD3-213ENST00000478264 RTCBQ9Y3I0 505 aaKnown RBP23.47■■□□□ 1.35
PLOD3-213ENST00000478264 RPS6KA4O75676 772 aa23.46■■□□□ 1.35
PLOD3-213ENST00000478264 SSFA2P28290 1259 aa23.46■■□□□ 1.35
PLOD3-213ENST00000478264 CANXP27824 592 aaKnown RBP23.45■■□□□ 1.34
PLOD3-213ENST00000478264 IL6STP40189 918 aaPredicted RBP23.45■■□□□ 1.34
PLOD3-213ENST00000478264 VAMP4O75379 141 aa23.44■■□□□ 1.34
PLOD3-213ENST00000478264 ADRA2BP18089 450 aa23.44■■□□□ 1.34
PLOD3-213ENST00000478264 FLAD1Q8NFF5 587 aa23.44■■□□□ 1.34
PLOD3-213ENST00000478264 NECTIN2Q92692 538 aa23.44■■□□□ 1.34
PLOD3-213ENST00000478264 COL15A1P39059 1388 aa23.43■■□□□ 1.34
PLOD3-213ENST00000478264 PNPLA7Q6ZV29 1317 aa23.43■■□□□ 1.34
PLOD3-213ENST00000478264 CCDC30Q5VVM6 783 aa23.43■■□□□ 1.34
PLOD3-213ENST00000478264 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.42■■□□□ 1.34
PLOD3-213ENST00000478264 NBPF26B4DH59 902 aa23.42■■□□□ 1.34
PLOD3-213ENST00000478264 PHF14O94880 888 aa23.42■■□□□ 1.34
PLOD3-213ENST00000478264 CT47B1P0C2W7 299 aaPredicted RBP23.42■■□□□ 1.34
PLOD3-213ENST00000478264 EIF5P55010 431 aaKnown RBP23.42■■□□□ 1.34
PLOD3-213ENST00000478264 NBPF10Q6P3W6 841 aaKnown RBP23.42■■□□□ 1.34
PLOD3-213ENST00000478264 AMIGO3Q86WK7 504 aa23.42■■□□□ 1.34
PLOD3-213ENST00000478264 NBPF15Q8N660 670 aa23.42■■□□□ 1.34
PLOD3-213ENST00000478264 DBF4Q9UBU7 674 aaPredicted RBP23.42■■□□□ 1.34
PLOD3-213ENST00000478264 PIP4K2AP48426 406 aaPredicted RBP23.41■■□□□ 1.34
PLOD3-213ENST00000478264 R3HDM1Q15032 1099 aaKnown RBP23.41■■□□□ 1.34
PLOD3-213ENST00000478264 NPM2Q86SE8 214 aaKnown RBP23.41■■□□□ 1.34
PLOD3-213ENST00000478264 DDX21Q9NR30 783 aaKnown RBP eCLIP23.41■■□□□ 1.34
PLOD3-213ENST00000478264 CHPF2Q9P2E5 772 aa23.41■■□□□ 1.34
PLOD3-213ENST00000478264 C4AP0C0L4 1744 aa23.4■■□□□ 1.34
PLOD3-213ENST00000478264 PDIA6Q15084 440 aa23.4■■□□□ 1.34
PLOD3-213ENST00000478264 TRAPPC3LQ5T215 181 aa23.4■■□□□ 1.34
PLOD3-213ENST00000478264 ZNF428Q96B54 188 aa23.4■■□□□ 1.34
PLOD3-213ENST00000478264 MYL6BP14649 208 aa23.39■■□□□ 1.33
PLOD3-213ENST00000478264 STK31Q9BXU1 1019 aa23.39■■□□□ 1.33
PLOD3-213ENST00000478264 ZNF330Q9Y3S2 320 aaPredicted RBP23.39■■□□□ 1.33
PLOD3-213ENST00000478264 A0A087WZG4 1122 aa23.38■■□□□ 1.33
PLOD3-213ENST00000478264 PROSER3Q2NL68 480 aa23.38■■□□□ 1.33
PLOD3-213ENST00000478264 CASZ1Q86V15 1759 aa23.37■■□□□ 1.33
PLOD3-213ENST00000478264 SMIM5Q71RC9 77 aa23.37■■□□□ 1.33
PLOD3-213ENST00000478264 LRP10Q7Z4F1 713 aa23.37■■□□□ 1.33
PLOD3-213ENST00000478264 COL23A1Q86Y22 540 aaPredicted RBP23.37■■□□□ 1.33
PLOD3-213ENST00000478264 ARHGEF1Q92888 912 aaKnown RBP23.37■■□□□ 1.33
PLOD3-213ENST00000478264 HYPKQ9NX55 129 aa23.37■■□□□ 1.33
PLOD3-213ENST00000478264 PSDA5PKW4 1024 aaPredicted RBP23.36■■□□□ 1.33
PLOD3-213ENST00000478264 ANXA1P04083 346 aa23.36■■□□□ 1.33
PLOD3-213ENST00000478264 RFC4P35249 363 aa23.36■■□□□ 1.33
PLOD3-213ENST00000478264 SCN7AQ01118 1682 aa23.35■■□□□ 1.33
PLOD3-213ENST00000478264 USP42Q9H9J4 1324 aaKnown RBP23.34■■□□□ 1.33
PLOD3-213ENST00000478264 MSH5O43196 834 aa23.34■■□□□ 1.33
PLOD3-213ENST00000478264 DZIP3Q86Y13 1208 aaKnown RBP23.34■■□□□ 1.33
PLOD3-213ENST00000478264 BCORQ6W2J9 1755 aa23.33■■□□□ 1.33
PLOD3-213ENST00000478264 TCERG1O14776 1098 aaKnown RBP23.33■■□□□ 1.33
PLOD3-213ENST00000478264 ALDH1L2Q3SY69 923 aa23.33■■□□□ 1.33
PLOD3-213ENST00000478264 NARFQ9UHQ1 456 aa23.33■■□□□ 1.33
PLOD3-213ENST00000478264 ZPR1O75312 459 aa23.32■■□□□ 1.32
PLOD3-213ENST00000478264 SLC4A2P04920 1241 aa23.32■■□□□ 1.32
PLOD3-213ENST00000478264 KIF6Q6ZMV9 814 aa23.32■■□□□ 1.32
PLOD3-213ENST00000478264 SLC16A10Q8TF71 515 aa23.32■■□□□ 1.32
PLOD3-213ENST00000478264 XAGE3Q8WTP9 111 aa23.32■■□□□ 1.32
PLOD3-213ENST00000478264 CACNA1FO60840 1977 aa23.31■■□□□ 1.32
PLOD3-213ENST00000478264 COPS6Q7L5N1 327 aa23.31■■□□□ 1.32
PLOD3-213ENST00000478264 ARXQ96QS3 562 aa23.31■■□□□ 1.32
PLOD3-213ENST00000478264 PDGFDQ9GZP0 370 aaPredicted RBP23.31■■□□□ 1.32
PLOD3-213ENST00000478264 TBC1D2BQ9UPU7 963 aa23.31■■□□□ 1.32
PLOD3-213ENST00000478264 TTLL7Q6ZT98 887 aa23.3■■□□□ 1.32
PLOD3-213ENST00000478264 SSH1Q8WYL5 1049 aa23.3■■□□□ 1.32
PLOD3-213ENST00000478264 PHAXQ9H814 394 aaKnown RBP23.3■■□□□ 1.32
PLOD3-213ENST00000478264 SRP68Q9UHB9 627 aaKnown RBP23.3■■□□□ 1.32
PLOD3-213ENST00000478264 RGL2O15211 777 aa23.29■■□□□ 1.32
PLOD3-213ENST00000478264 CAMTA2O94983 1202 aa23.29■■□□□ 1.32
PLOD3-213ENST00000478264 AIMP1Q12904 312 aaKnown RBP23.29■■□□□ 1.32
PLOD3-213ENST00000478264 USPL1Q5W0Q7 1092 aa23.29■■□□□ 1.32
PLOD3-213ENST00000478264 MAP3K15Q6ZN16 1313 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms