RNA–Protein interactions for RNA: ENST00000478100.3

NCBP1-203, Transcript of nuclear cap binding protein subunit 1, humanhuman

TSL 3

Gene NCBP1, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1-203ENST00000478100 SOS1Q07889 1333 aaPredicted RBP24.42■■□□□ 1.5
NCBP1-203ENST00000478100 GYS1P13807 737 aa24.42■■□□□ 1.5
NCBP1-203ENST00000478100 NLGN1Q8N2Q7 840 aa24.41■■□□□ 1.5
NCBP1-203ENST00000478100 ANP32CO43423 234 aa24.39■■□□□ 1.49
NCBP1-203ENST00000478100 PNISRQ8TF01 805 aaKnown RBP24.39■■□□□ 1.49
NCBP1-203ENST00000478100 SRP68Q9UHB9 627 aaKnown RBP24.39■■□□□ 1.49
NCBP1-203ENST00000478100 RRP7AQ9Y3A4 280 aaKnown RBP24.39■■□□□ 1.49
NCBP1-203ENST00000478100 USP16Q9Y5T5 823 aa24.39■■□□□ 1.49
NCBP1-203ENST00000478100 USP42Q9H9J4 1324 aaKnown RBP24.38■■□□□ 1.49
NCBP1-203ENST00000478100 PRAMEF22A3QJZ6 481 aa24.38■■□□□ 1.49
NCBP1-203ENST00000478100 CANXP27824 592 aaKnown RBP24.38■■□□□ 1.49
NCBP1-203ENST00000478100 KLHL34Q8N239 644 aa24.38■■□□□ 1.49
NCBP1-203ENST00000478100 MMP10P09238 476 aa24.37■■□□□ 1.49
NCBP1-203ENST00000478100 SNRPA1P09661 255 aaKnown RBP24.37■■□□□ 1.49
NCBP1-203ENST00000478100 EIF5P55010 431 aaKnown RBP24.37■■□□□ 1.49
NCBP1-203ENST00000478100 C4AP0C0L4 1744 aa24.37■■□□□ 1.49
NCBP1-203ENST00000478100 A1BGP04217 495 aa24.36■■□□□ 1.49
NCBP1-203ENST00000478100 NEUROD2Q15784 382 aa24.36■■□□□ 1.49
NCBP1-203ENST00000478100 NLGN2Q8NFZ4 835 aa24.36■■□□□ 1.49
NCBP1-203ENST00000478100 CD2APQ9Y5K6 639 aa24.36■■□□□ 1.49
NCBP1-203ENST00000478100 COL15A1P39059 1388 aa24.35■■□□□ 1.49
NCBP1-203ENST00000478100 LMOD3Q0VAK6 560 aa24.35■■□□□ 1.49
NCBP1-203ENST00000478100 NARFQ9UHQ1 456 aa24.35■■□□□ 1.49
NCBP1-203ENST00000478100 TRIM35Q9UPQ4 493 aa24.35■■□□□ 1.49
NCBP1-203ENST00000478100 EIF4A1P60842 406 aaKnown RBP24.34■■□□□ 1.49
NCBP1-203ENST00000478100 FKBP8Q14318 412 aa24.34■■□□□ 1.49
NCBP1-203ENST00000478100 USPL1Q5W0Q7 1092 aa24.34■■□□□ 1.49
NCBP1-203ENST00000478100 ZPR1O75312 459 aa24.33■■□□□ 1.49
NCBP1-203ENST00000478100 DCAF8L1A6NGE4 600 aa24.32■■□□□ 1.48
NCBP1-203ENST00000478100 IL6STP40189 918 aaPredicted RBP24.32■■□□□ 1.48
NCBP1-203ENST00000478100 TM4SF1P30408 202 aa24.31■■□□□ 1.48
NCBP1-203ENST00000478100 BCL2L12Q9HB09 334 aa24.31■■□□□ 1.48
NCBP1-203ENST00000478100 BABAM1Q9NWV8 329 aa24.31■■□□□ 1.48
NCBP1-203ENST00000478100 KDM3BQ7LBC6 1761 aa24.31■■□□□ 1.48
NCBP1-203ENST00000478100 A0A087WZG4 1122 aa24.3■■□□□ 1.48
NCBP1-203ENST00000478100 GIGYF1O75420 1035 aaPredicted RBP24.3■■□□□ 1.48
NCBP1-203ENST00000478100 APAF1O14727 1248 aa24.29■■□□□ 1.48
NCBP1-203ENST00000478100 TSPYL4Q9UJ04 414 aa24.29■■□□□ 1.48
NCBP1-203ENST00000478100 MRS2Q9HD23 443 aa24.28■■□□□ 1.48
NCBP1-203ENST00000478100 PARP3Q9Y6F1 533 aa24.28■■□□□ 1.48
NCBP1-203ENST00000478100 NBPF26B4DH59 902 aa24.27■■□□□ 1.48
NCBP1-203ENST00000478100 PIP4K2AP48426 406 aaPredicted RBP24.27■■□□□ 1.48
NCBP1-203ENST00000478100 DDR1Q08345 913 aa24.27■■□□□ 1.48
NCBP1-203ENST00000478100 NBPF10Q6P3W6 841 aaKnown RBP24.27■■□□□ 1.48
NCBP1-203ENST00000478100 NBPF15Q8N660 670 aa24.27■■□□□ 1.48
NCBP1-203ENST00000478100 TBC1D2BQ9UPU7 963 aa24.27■■□□□ 1.48
NCBP1-203ENST00000478100 CHL1O00533 1208 aa24.26■■□□□ 1.47
NCBP1-203ENST00000478100 ZNF330Q9Y3S2 320 aaPredicted RBP24.26■■□□□ 1.47
NCBP1-203ENST00000478100 POLRMTO00411 1230 aaKnown RBP24.25■■□□□ 1.47
NCBP1-203ENST00000478100 NFIXQ14938 502 aa24.25■■□□□ 1.47
NCBP1-203ENST00000478100 GPR162Q16538 588 aa24.23■■□□□ 1.47
NCBP1-203ENST00000478100 UTRNP46939 3433 aa24.23■■□□□ 1.47
NCBP1-203ENST00000478100 CAMTA2O94983 1202 aa24.22■■□□□ 1.47
NCBP1-203ENST00000478100 NPM2Q86SE8 214 aaKnown RBP24.22■■□□□ 1.47
NCBP1-203ENST00000478100 C10orf71Q711Q0 1435 aa24.21■■□□□ 1.47
NCBP1-203ENST00000478100 TGFB2P61812 414 aa24.21■■□□□ 1.47
NCBP1-203ENST00000478100 DZIP3Q86Y13 1208 aaKnown RBP24.21■■□□□ 1.47
NCBP1-203ENST00000478100 KIF13BQ9NQT8 1826 aa24.2■■□□□ 1.46
NCBP1-203ENST00000478100 YBX3P16989 372 aaKnown RBP eCLIP24.2■■□□□ 1.46
NCBP1-203ENST00000478100 CFAP44Q96MT7 982 aa24.2■■□□□ 1.46
NCBP1-203ENST00000478100 LAS1LQ9Y4W2 734 aaKnown RBP24.2■■□□□ 1.46
NCBP1-203ENST00000478100 TBC1D9BQ66K14 1250 aa24.19■■□□□ 1.46
NCBP1-203ENST00000478100 PELP1Q8IZL8 1130 aaKnown RBP24.19■■□□□ 1.46
NCBP1-203ENST00000478100 GOLGB1Q14789 3259 aaKnown RBP24.18■■□□□ 1.46
NCBP1-203ENST00000478100 ZNF853P0CG23 659 aa24.18■■□□□ 1.46
NCBP1-203ENST00000478100 LAMB4A4D0S4 1761 aa24.18■■□□□ 1.46
NCBP1-203ENST00000478100 SERPINB2P05120 415 aa24.17■■□□□ 1.46
NCBP1-203ENST00000478100 BICDL1Q6ZP65 573 aa24.17■■□□□ 1.46
NCBP1-203ENST00000478100 PXDNLA1KZ92 1463 aa24.16■■□□□ 1.46
NCBP1-203ENST00000478100 A0A0G2JLW4 131 aa24.16■■□□□ 1.46
NCBP1-203ENST00000478100 KRT24Q2M2I5 525 aa24.16■■□□□ 1.46
NCBP1-203ENST00000478100 CLEC4GQ6UXB4 293 aa24.16■■□□□ 1.46
NCBP1-203ENST00000478100 SCN7AQ01118 1682 aa24.15■■□□□ 1.46
NCBP1-203ENST00000478100 ERBB4Q15303 1308 aa24.14■■□□□ 1.46
NCBP1-203ENST00000478100 DPEP1P16444 411 aa24.14■■□□□ 1.45
NCBP1-203ENST00000478100 EIF2S2P20042 333 aaKnown RBP24.14■■□□□ 1.45
NCBP1-203ENST00000478100 KCNA3P22001 575 aa24.14■■□□□ 1.45
NCBP1-203ENST00000478100 PDIA6Q15084 440 aa24.14■■□□□ 1.45
NCBP1-203ENST00000478100 CCDC27Q2M243 656 aa24.14■■□□□ 1.45
NCBP1-203ENST00000478100 KIAA1551Q9HCM1 1747 aa24.14■■□□□ 1.45
NCBP1-203ENST00000478100 MBIPQ9NS73 344 aa24.14■■□□□ 1.45
NCBP1-203ENST00000478100 IFT57Q9NWB7 429 aa24.14■■□□□ 1.45
NCBP1-203ENST00000478100 NRXN2Q9P2S2 1712 aa24.13■■□□□ 1.45
NCBP1-203ENST00000478100 SENP3-EIF4A1A0A087X0R7 540 aa24.13■■□□□ 1.45
NCBP1-203ENST00000478100 RGL2O15211 777 aa24.13■■□□□ 1.45
NCBP1-203ENST00000478100 GRIN3BO60391 1043 aa24.13■■□□□ 1.45
NCBP1-203ENST00000478100 MYL6BP14649 208 aa24.13■■□□□ 1.45
NCBP1-203ENST00000478100 CALD1Q05682 793 aaKnown RBP24.13■■□□□ 1.45
NCBP1-203ENST00000478100 NCBP3Q53F19 620 aaKnown RBP24.13■■□□□ 1.45
NCBP1-203ENST00000478100 LRP10Q7Z4F1 713 aa24.13■■□□□ 1.45
NCBP1-203ENST00000478100 NGEFQ8N5V2 710 aa24.13■■□□□ 1.45
NCBP1-203ENST00000478100 AFDNP55196 1824 aaKnown RBP24.12■■□□□ 1.45
NCBP1-203ENST00000478100 SETDB2Q96T68 719 aa24.12■■□□□ 1.45
NCBP1-203ENST00000478100 WWC3Q9ULE0 1092 aa24.12■■□□□ 1.45
NCBP1-203ENST00000478100 BCORQ6W2J9 1755 aa24.11■■□□□ 1.45
NCBP1-203ENST00000478100 YY1P25490 414 aa24.11■■□□□ 1.45
NCBP1-203ENST00000478100 GNAI1P63096 354 aa24.11■■□□□ 1.45
NCBP1-203ENST00000478100 HLFQ16534 295 aa24.11■■□□□ 1.45
NCBP1-203ENST00000478100 N4BP2Q86UW6 1770 aaPredicted RBP24.11■■□□□ 1.45
NCBP1-203ENST00000478100 TTLL7Q6ZT98 887 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms