RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 BTBD11A6QL63 1104 aa13.64□□□□□ -0.23
LCLAT1-209ENST00000478015 CANXP27824 592 aaKnown RBP13.64□□□□□ -0.23
LCLAT1-209ENST00000478015 USPL1Q5W0Q7 1092 aa13.64□□□□□ -0.23
LCLAT1-209ENST00000478015 VSIG10Q8N0Z9 540 aa13.64□□□□□ -0.23
LCLAT1-209ENST00000478015 USP16Q9Y5T5 823 aa13.64□□□□□ -0.23
LCLAT1-209ENST00000478015 A1BGP04217 495 aa13.63□□□□□ -0.23
LCLAT1-209ENST00000478015 HMGB2P26583 209 aaKnown RBP13.63□□□□□ -0.23
LCLAT1-209ENST00000478015 RALBP1Q15311 655 aa13.63□□□□□ -0.23
LCLAT1-209ENST00000478015 NLGN1Q8N2Q7 840 aa13.63□□□□□ -0.23
LCLAT1-209ENST00000478015 TM4SF1P30408 202 aa13.62□□□□□ -0.23
LCLAT1-209ENST00000478015 EIF5P55010 431 aaKnown RBP13.62□□□□□ -0.23
LCLAT1-209ENST00000478015 TTC5Q8N0Z6 440 aa13.62□□□□□ -0.23
LCLAT1-209ENST00000478015 COL15A1P39059 1388 aa13.62□□□□□ -0.23
LCLAT1-209ENST00000478015 PXDNLA1KZ92 1463 aa13.62□□□□□ -0.23
LCLAT1-209ENST00000478015 A0A0G2JLW4 131 aa13.61□□□□□ -0.23
LCLAT1-209ENST00000478015 PRKRIP1Q9H875 184 aaPredicted RBP13.61□□□□□ -0.23
LCLAT1-209ENST00000478015 AFDNP55196 1824 aaKnown RBP13.61□□□□□ -0.23
LCLAT1-209ENST00000478015 C10orf71Q711Q0 1435 aa13.61□□□□□ -0.23
LCLAT1-209ENST00000478015 KCNA3P22001 575 aa13.61□□□□□ -0.23
LCLAT1-209ENST00000478015 ZNF784Q8NCA9 323 aaPredicted RBP13.61□□□□□ -0.23
LCLAT1-209ENST00000478015 BRCA1P38398 1863 aaKnown RBP13.6□□□□□ -0.23
LCLAT1-209ENST00000478015 MYBBP1AQ9BQG0 1328 aaKnown RBP13.6□□□□□ -0.23
LCLAT1-209ENST00000478015 DCAF8L1A6NGE4 600 aa13.6□□□□□ -0.23
LCLAT1-209ENST00000478015 POLRMTO00411 1230 aaKnown RBP13.6□□□□□ -0.23
LCLAT1-209ENST00000478015 NFIXQ14938 502 aa13.6□□□□□ -0.23
LCLAT1-209ENST00000478015 CCDC184Q52MB2 194 aa13.6□□□□□ -0.23
LCLAT1-209ENST00000478015 CCDC146Q8IYE0 955 aa13.6□□□□□ -0.23
LCLAT1-209ENST00000478015 NARFQ9UHQ1 456 aa13.6□□□□□ -0.23
LCLAT1-209ENST00000478015 NFE2L2Q16236 605 aa13.59□□□□□ -0.23
LCLAT1-209ENST00000478015 RTF1Q92541 710 aaKnown RBP13.59□□□□□ -0.23
LCLAT1-209ENST00000478015 FMNL2Q96PY5 1086 aa13.59□□□□□ -0.23
LCLAT1-209ENST00000478015 TBC1D2BQ9UPU7 963 aa13.59□□□□□ -0.23
LCLAT1-209ENST00000478015 NBPF26B4DH59 902 aa13.59□□□□□ -0.23
LCLAT1-209ENST00000478015 DPEP1P16444 411 aa13.59□□□□□ -0.23
LCLAT1-209ENST00000478015 NBPF10Q6P3W6 841 aaKnown RBP13.59□□□□□ -0.23
LCLAT1-209ENST00000478015 NBPF15Q8N660 670 aa13.59□□□□□ -0.23
LCLAT1-209ENST00000478015 RRP7AQ9Y3A4 280 aaKnown RBP13.59□□□□□ -0.23
LCLAT1-209ENST00000478015 KDM3BQ7LBC6 1761 aa13.58□□□□□ -0.23
LCLAT1-209ENST00000478015 HTATSF1O43719 755 aaKnown RBP13.58□□□□□ -0.24
LCLAT1-209ENST00000478015 STARD3NLO95772 234 aa13.58□□□□□ -0.24
LCLAT1-209ENST00000478015 TAF7Q15545 349 aaPredicted RBP13.58□□□□□ -0.24
LCLAT1-209ENST00000478015 ADAMTS8Q9UP79 889 aa13.58□□□□□ -0.24
LCLAT1-209ENST00000478015 ZPR1O75312 459 aa13.57□□□□□ -0.24
LCLAT1-209ENST00000478015 ZNF330Q9Y3S2 320 aaPredicted RBP13.57□□□□□ -0.24
LCLAT1-209ENST00000478015 PARP3Q9Y6F1 533 aa13.57□□□□□ -0.24
LCLAT1-209ENST00000478015 CARMIL3Q8ND23 1372 aa13.57□□□□□ -0.24
LCLAT1-209ENST00000478015 CHRNA5P30532 468 aa13.57□□□□□ -0.24
LCLAT1-209ENST00000478015 NRXN2Q9P2S2 1712 aa13.57□□□□□ -0.24
LCLAT1-209ENST00000478015 TBC1D9BQ66K14 1250 aa13.56□□□□□ -0.24
LCLAT1-209ENST00000478015 BICDL1Q6ZP65 573 aa13.56□□□□□ -0.24
LCLAT1-209ENST00000478015 CCDC24Q8N4L8 307 aa13.56□□□□□ -0.24
LCLAT1-209ENST00000478015 TMPOP42166 694 aaKnown RBP13.55□□□□□ -0.24
LCLAT1-209ENST00000478015 SCN7AQ01118 1682 aa13.55□□□□□ -0.24
LCLAT1-209ENST00000478015 CAMTA2O94983 1202 aa13.55□□□□□ -0.24
LCLAT1-209ENST00000478015 SNRPA1P09661 255 aaKnown RBP13.55□□□□□ -0.24
LCLAT1-209ENST00000478015 IL6STP40189 918 aaPredicted RBP13.55□□□□□ -0.24
LCLAT1-209ENST00000478015 RIPK4P57078 832 aa13.55□□□□□ -0.24
LCLAT1-209ENST00000478015 EIF4A1P60842 406 aaKnown RBP13.55□□□□□ -0.24
LCLAT1-209ENST00000478015 ANKRD31Q8N7Z5 1873 aa13.54□□□□□ -0.24
LCLAT1-209ENST00000478015 GIGYF1O75420 1035 aaPredicted RBP13.54□□□□□ -0.24
LCLAT1-209ENST00000478015 TGFB2P61812 414 aa13.54□□□□□ -0.24
LCLAT1-209ENST00000478015 NEUROD2Q15784 382 aa13.54□□□□□ -0.24
LCLAT1-209ENST00000478015 TEX13AQ9BXU3 409 aaPredicted RBP13.54□□□□□ -0.24
LCLAT1-209ENST00000478015 TRIM35Q9UPQ4 493 aa13.54□□□□□ -0.24
LCLAT1-209ENST00000478015 SENP3-EIF4A1A0A087X0R7 540 aa13.53□□□□□ -0.24
LCLAT1-209ENST00000478015 MAPK8IP3Q9UPT6 1336 aa13.53□□□□□ -0.24
LCLAT1-209ENST00000478015 BCORQ6W2J9 1755 aa13.53□□□□□ -0.24
LCLAT1-209ENST00000478015 GRIN3BO60391 1043 aa13.53□□□□□ -0.24
LCLAT1-209ENST00000478015 SERPINB2P05120 415 aa13.53□□□□□ -0.24
LCLAT1-209ENST00000478015 KRT24Q2M2I5 525 aa13.53□□□□□ -0.24
LCLAT1-209ENST00000478015 BCS1LQ9Y276 419 aa13.53□□□□□ -0.24
LCLAT1-209ENST00000478015 HLFQ16534 295 aa13.51□□□□□ -0.25
LCLAT1-209ENST00000478015 DZIP3Q86Y13 1208 aaKnown RBP13.51□□□□□ -0.25
LCLAT1-209ENST00000478015 LAMB4A4D0S4 1761 aa13.51□□□□□ -0.25
LCLAT1-209ENST00000478015 ADCY9O60503 1353 aa13.5□□□□□ -0.25
LCLAT1-209ENST00000478015 NEFMP07197 916 aa13.5□□□□□ -0.25
LCLAT1-209ENST00000478015 LRP10Q7Z4F1 713 aa13.5□□□□□ -0.25
LCLAT1-209ENST00000478015 ARFGEF1Q9Y6D6 1849 aa13.5□□□□□ -0.25
LCLAT1-209ENST00000478015 ZEB1P37275 1124 aaPredicted RBP13.49□□□□□ -0.25
LCLAT1-209ENST00000478015 PRR5LQ6MZQ0 368 aa13.49□□□□□ -0.25
LCLAT1-209ENST00000478015 NGEFQ8N5V2 710 aa13.49□□□□□ -0.25
LCLAT1-209ENST00000478015 RUNDC1Q96C34 613 aa13.49□□□□□ -0.25
LCLAT1-209ENST00000478015 COL11A2P13942 1736 aaPredicted RBP13.49□□□□□ -0.25
LCLAT1-209ENST00000478015 PCNTO95613 3336 aa13.49□□□□□ -0.25
LCLAT1-209ENST00000478015 ANXA1P04083 346 aa13.48□□□□□ -0.25
LCLAT1-209ENST00000478015 PDIA6Q15084 440 aa13.48□□□□□ -0.25
LCLAT1-209ENST00000478015 PROSER3Q2NL68 480 aa13.48□□□□□ -0.25
LCLAT1-209ENST00000478015 TTLL7Q6ZT98 887 aa13.48□□□□□ -0.25
LCLAT1-209ENST00000478015 A0A087WZG4 1122 aa13.48□□□□□ -0.25
LCLAT1-209ENST00000478015 ZNF316A6NFI3 1004 aaPredicted RBP13.48□□□□□ -0.25
LCLAT1-209ENST00000478015 PRELPP51888 382 aa13.48□□□□□ -0.25
LCLAT1-209ENST00000478015 PNNQ9H307 717 aaKnown RBP13.48□□□□□ -0.25
LCLAT1-209ENST00000478015 TSPYL4Q9UJ04 414 aa13.48□□□□□ -0.25
LCLAT1-209ENST00000478015 DLEC1Q9Y238 1755 aa13.48□□□□□ -0.25
LCLAT1-209ENST00000478015 APAF1O14727 1248 aa13.47□□□□□ -0.25
LCLAT1-209ENST00000478015 WDR43Q15061 677 aaKnown RBP eCLIP13.47□□□□□ -0.25
LCLAT1-209ENST00000478015 PIM2Q9P1W9 311 aa13.47□□□□□ -0.25
LCLAT1-209ENST00000478015 ATP10DQ9P241 1426 aa13.47□□□□□ -0.25
LCLAT1-209ENST00000478015 NUP98P52948 1817 aa13.47□□□□□ -0.25
LCLAT1-209ENST00000478015 SBF1O95248 1867 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms