RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 NPC1L1Q9UHC9 1359 aa11.16□□□□□ -0.62
ERCC8-205ENST00000477893 LOC102724428A0A0B4J2F2 783 aa11.16□□□□□ -0.62
ERCC8-205ENST00000477893 HSP90AB1P08238 724 aaKnown RBP11.16□□□□□ -0.62
ERCC8-205ENST00000477893 SIK1P57059 783 aa11.16□□□□□ -0.62
ERCC8-205ENST00000477893 DCAF5Q96JK2 942 aa11.16□□□□□ -0.62
ERCC8-205ENST00000477893 AK7Q96M32 723 aa11.16□□□□□ -0.62
ERCC8-205ENST00000477893 ATP6V1AP38606 617 aa11.15□□□□□ -0.62
ERCC8-205ENST00000477893 EMP3P54852 163 aa11.15□□□□□ -0.62
ERCC8-205ENST00000477893 COL23A1Q86Y22 540 aaPredicted RBP11.15□□□□□ -0.62
ERCC8-205ENST00000477893 LINC00116Q8NCU8 138 aa11.15□□□□□ -0.62
ERCC8-205ENST00000477893 FHDC1Q9C0D6 1143 aaPredicted RBP11.15□□□□□ -0.62
ERCC8-205ENST00000477893 ATG3Q9NT62 314 aa11.15□□□□□ -0.62
ERCC8-205ENST00000477893 C4BP0C0L5 1744 aa11.15□□□□□ -0.63
ERCC8-205ENST00000477893 POLD1P28340 1107 aa11.14□□□□□ -0.63
ERCC8-205ENST00000477893 PPP2R1AP30153 589 aa11.14□□□□□ -0.63
ERCC8-205ENST00000477893 ITPK1Q13572 414 aa11.14□□□□□ -0.63
ERCC8-205ENST00000477893 AMIGO3Q86WK7 504 aa11.14□□□□□ -0.63
ERCC8-205ENST00000477893 CFAP53Q96M91 514 aa11.14□□□□□ -0.63
ERCC8-205ENST00000477893 ARXQ96QS3 562 aa11.14□□□□□ -0.63
ERCC8-205ENST00000477893 PLEKHG2Q9H7P9 1386 aa11.14□□□□□ -0.63
ERCC8-205ENST00000477893 QSER1Q2KHR3 1735 aa11.13□□□□□ -0.63
ERCC8-205ENST00000477893 ERVV-2B6SEH9 535 aa11.13□□□□□ -0.63
ERCC8-205ENST00000477893 GNPATO15228 680 aa11.13□□□□□ -0.63
ERCC8-205ENST00000477893 PTCD1O75127 700 aaKnown RBP11.13□□□□□ -0.63
ERCC8-205ENST00000477893 PYGBP11216 843 aa11.13□□□□□ -0.63
ERCC8-205ENST00000477893 MTHFSDQ2M296 383 aaKnown RBP11.13□□□□□ -0.63
ERCC8-205ENST00000477893 NFATC2IPQ8NCF5 419 aa11.13□□□□□ -0.63
ERCC8-205ENST00000477893 TAF1LQ8IZX4 1826 aa11.13□□□□□ -0.63
ERCC8-205ENST00000477893 AKAP4Q5JQC9 854 aa11.12□□□□□ -0.63
ERCC8-205ENST00000477893 LGR6Q9HBX8 967 aa11.12□□□□□ -0.63
ERCC8-205ENST00000477893 PCDHB8Q9UN66 801 aa11.12□□□□□ -0.63
ERCC8-205ENST00000477893 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.11□□□□□ -0.63
ERCC8-205ENST00000477893 DCAF8Q5TAQ9 597 aa11.11□□□□□ -0.63
ERCC8-205ENST00000477893 SLC16A10Q8TF71 515 aa11.11□□□□□ -0.63
ERCC8-205ENST00000477893 SLC4A9Q96Q91 983 aa11.11□□□□□ -0.63
ERCC8-205ENST00000477893 POTEB3A0JP26 581 aa11.1□□□□□ -0.63
ERCC8-205ENST00000477893 U2AF1L5P0DN76 240 aaPredicted RBP11.1□□□□□ -0.63
ERCC8-205ENST00000477893 PRKAR2BP31323 418 aa11.1□□□□□ -0.63
ERCC8-205ENST00000477893 U2AF1Q01081 240 aaKnown RBP eCLIP11.1□□□□□ -0.63
ERCC8-205ENST00000477893 POTEBQ6S5H4 581 aa11.1□□□□□ -0.63
ERCC8-205ENST00000477893 SYT17Q9BSW7 474 aa11.1□□□□□ -0.63
ERCC8-205ENST00000477893 FAM205CA6NFA0 338 aa11.09□□□□□ -0.63
ERCC8-205ENST00000477893 RNMTO43148 476 aaKnown RBP11.09□□□□□ -0.63
ERCC8-205ENST00000477893 DDX10Q13206 875 aaKnown RBP11.09□□□□□ -0.63
ERCC8-205ENST00000477893 SLC39A6Q13433 755 aa11.09□□□□□ -0.63
ERCC8-205ENST00000477893 KRTAP3-3Q9BYR6 98 aa11.09□□□□□ -0.63
ERCC8-205ENST00000477893 KRTAP3-2Q9BYR7 98 aa11.09□□□□□ -0.63
ERCC8-205ENST00000477893 SLC52A2Q9HAB3 445 aa11.09□□□□□ -0.63
ERCC8-205ENST00000477893 UBR3Q6ZT12 1888 aa11.08□□□□□ -0.64
ERCC8-205ENST00000477893 SCN11AQ9UI33 1791 aa11.08□□□□□ -0.64
ERCC8-205ENST00000477893 MAP3K5Q99683 1374 aa11.08□□□□□ -0.64
ERCC8-205ENST00000477893 FLAD1Q8NFF5 587 aa11.08□□□□□ -0.64
ERCC8-205ENST00000477893 NLGN2Q8NFZ4 835 aa11.08□□□□□ -0.64
ERCC8-205ENST00000477893 HS3ST6Q96QI5 342 aa11.08□□□□□ -0.64
ERCC8-205ENST00000477893 NUDCQ9Y266 331 aa11.08□□□□□ -0.64
ERCC8-205ENST00000477893 HMGB2P26583 209 aaKnown RBP11.07□□□□□ -0.64
ERCC8-205ENST00000477893 SSFA2P28290 1259 aa11.07□□□□□ -0.64
ERCC8-205ENST00000477893 C3orf67Q6ZVT6 689 aa11.07□□□□□ -0.64
ERCC8-205ENST00000477893 GAS2L2Q8NHY3 880 aa11.07□□□□□ -0.64
ERCC8-205ENST00000477893 PHACTR3Q96KR7 559 aa11.07□□□□□ -0.64
ERCC8-205ENST00000477893 RSPH6AQ9H0K4 717 aa11.07□□□□□ -0.64
ERCC8-205ENST00000477893 WWC3Q9ULE0 1092 aa11.07□□□□□ -0.64
ERCC8-205ENST00000477893 MRC1P22897 1456 aa11.06□□□□□ -0.64
ERCC8-205ENST00000477893 GNAT3A8MTJ3 354 aa11.06□□□□□ -0.64
ERCC8-205ENST00000477893 TEFQ10587 303 aa11.06□□□□□ -0.64
ERCC8-205ENST00000477893 DNAJC10Q8IXB1 793 aa11.06□□□□□ -0.64
ERCC8-205ENST00000477893 RTCBQ9Y3I0 505 aaKnown RBP11.06□□□□□ -0.64
ERCC8-205ENST00000477893 COL5A3P25940 1745 aaPredicted RBP11.06□□□□□ -0.64
ERCC8-205ENST00000477893 TJP1Q07157 1748 aa11.06□□□□□ -0.64
ERCC8-205ENST00000477893 CRKLP46109 303 aaKnown RBP11.05□□□□□ -0.64
ERCC8-205ENST00000477893 GPR162Q16538 588 aa11.05□□□□□ -0.64
ERCC8-205ENST00000477893 TRAPPC3LQ5T215 181 aa11.05□□□□□ -0.64
ERCC8-205ENST00000477893 PDCD7Q8N8D1 485 aaKnown RBP11.05□□□□□ -0.64
ERCC8-205ENST00000477893 CNTNAP4Q9C0A0 1308 aa11.05□□□□□ -0.64
ERCC8-205ENST00000477893 VIRMAQ69YN4 1812 aaKnown RBP11.05□□□□□ -0.64
ERCC8-205ENST00000477893 KCPQ6ZWJ8 1503 aa11.04□□□□□ -0.64
ERCC8-205ENST00000477893 COL24A1Q17RW2 1714 aa11.04□□□□□ -0.64
ERCC8-205ENST00000477893 UTRNP46939 3433 aa11.04□□□□□ -0.64
ERCC8-205ENST00000477893 YY1P25490 414 aa11.04□□□□□ -0.64
ERCC8-205ENST00000477893 MCM10Q7L590 875 aa11.04□□□□□ -0.64
ERCC8-205ENST00000477893 TTC5Q8N0Z6 440 aa11.04□□□□□ -0.64
ERCC8-205ENST00000477893 IL17REQ8NFR9 667 aa11.04□□□□□ -0.64
ERCC8-205ENST00000477893 RFC4P35249 363 aa11.03□□□□□ -0.64
ERCC8-205ENST00000477893 DCTN1Q14203 1278 aa11.03□□□□□ -0.64
ERCC8-205ENST00000477893 ARHGEF1Q92888 912 aaKnown RBP11.03□□□□□ -0.64
ERCC8-205ENST00000477893 SRP68Q9UHB9 627 aaKnown RBP11.03□□□□□ -0.64
ERCC8-205ENST00000477893 ADAMTS7Q9UKP4 1686 aa11.03□□□□□ -0.64
ERCC8-205ENST00000477893 ZNF831Q5JPB2 1677 aa11.02□□□□□ -0.64
ERCC8-205ENST00000477893 RPS6KA4O75676 772 aa11.02□□□□□ -0.65
ERCC8-205ENST00000477893 MMP10P09238 476 aa11.02□□□□□ -0.65
ERCC8-205ENST00000477893 RC3H1Q5TC82 1133 aaKnown RBP11.02□□□□□ -0.65
ERCC8-205ENST00000477893 RTF1Q92541 710 aaKnown RBP11.02□□□□□ -0.65
ERCC8-205ENST00000477893 CCDC87Q9NVE4 849 aa11.02□□□□□ -0.65
ERCC8-205ENST00000477893 ZNF330Q9Y3S2 320 aaPredicted RBP11.02□□□□□ -0.65
ERCC8-205ENST00000477893 C4AP0C0L4 1744 aa11.01□□□□□ -0.65
ERCC8-205ENST00000477893 FCHSD2O94868 740 aa11.01□□□□□ -0.65
ERCC8-205ENST00000477893 NEFMP07197 916 aa11.01□□□□□ -0.65
ERCC8-205ENST00000477893 INTS5Q6P9B9 1019 aaKnown RBP11.01□□□□□ -0.65
ERCC8-205ENST00000477893 L3MBTL3Q96JM7 780 aaPredicted RBP11.01□□□□□ -0.65
ERCC8-205ENST00000477893 CICQ96RK0 1608 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms