RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 TCP11L2Q8N4U5 519 aa9.22□□□□□ -0.93
LINC00173-202ENST00000477702 RDH13Q8NBN7 331 aa9.22□□□□□ -0.93
LINC00173-202ENST00000477702 STAC3Q96MF2 364 aa9.22□□□□□ -0.93
LINC00173-202ENST00000477702 PRAM1Q96QH2 718 aa9.22□□□□□ -0.93
LINC00173-202ENST00000477702 ARXQ96QS3 562 aa9.22□□□□□ -0.93
LINC00173-202ENST00000477702 STK32BQ9NY57 414 aa9.22□□□□□ -0.93
LINC00173-202ENST00000477702 ALS2Q96Q42 1657 aa9.22□□□□□ -0.93
LINC00173-202ENST00000477702 SSH2Q76I76 1423 aa9.22□□□□□ -0.93
LINC00173-202ENST00000477702 BCAMP50895 628 aa9.21□□□□□ -0.94
LINC00173-202ENST00000477702 DDRGK1Q96HY6 314 aa9.21□□□□□ -0.94
LINC00173-202ENST00000477702 HIRIP3Q9BW71 556 aaPredicted RBP9.21□□□□□ -0.94
LINC00173-202ENST00000477702 MTFR1LQ9H019 292 aa9.21□□□□□ -0.94
LINC00173-202ENST00000477702 KNDC1Q76NI1 1749 aa9.21□□□□□ -0.94
LINC00173-202ENST00000477702 SHANK3Q9BYB0 1731 aa9.2□□□□□ -0.94
LINC00173-202ENST00000477702 GOLGA8CPA6NN73 597 aa9.2□□□□□ -0.94
LINC00173-202ENST00000477702 NGDNQ8NEJ9 315 aaKnown RBP9.2□□□□□ -0.94
LINC00173-202ENST00000477702 GOLGB1Q14789 3259 aaKnown RBP9.2□□□□□ -0.94
LINC00173-202ENST00000477702 CRYBG1Q9Y4K1 1723 aa9.19□□□□□ -0.94
LINC00173-202ENST00000477702 HSPA6P17066 643 aa9.19□□□□□ -0.94
LINC00173-202ENST00000477702 SLC15A2Q16348 729 aa9.19□□□□□ -0.94
LINC00173-202ENST00000477702 SULF1Q8IWU6 871 aa9.19□□□□□ -0.94
LINC00173-202ENST00000477702 WNT2BQ93097 391 aa9.19□□□□□ -0.94
LINC00173-202ENST00000477702 SIRT1Q96EB6 747 aa9.19□□□□□ -0.94
LINC00173-202ENST00000477702 LRCH3Q96II8 777 aa9.19□□□□□ -0.94
LINC00173-202ENST00000477702 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.19□□□□□ -0.94
LINC00173-202ENST00000477702 POGKQ9P215 609 aa9.19□□□□□ -0.94
LINC00173-202ENST00000477702 PRR36Q9H6K5 1346 aa9.19□□□□□ -0.94
LINC00173-202ENST00000477702 ANKARQ7Z5J8 1434 aa9.19□□□□□ -0.94
LINC00173-202ENST00000477702 OVOS2A0A0G2JMS6 1433 aa9.18□□□□□ -0.94
LINC00173-202ENST00000477702 OVOS2A0A0J9YW53 1432 aa9.18□□□□□ -0.94
LINC00173-202ENST00000477702 TXNRD1Q16881 649 aa9.18□□□□□ -0.94
LINC00173-202ENST00000477702 OVOS2Q6IE36 1432 aa9.18□□□□□ -0.94
LINC00173-202ENST00000477702 ANKK1Q8NFD2 765 aa9.18□□□□□ -0.94
LINC00173-202ENST00000477702 SLF2Q8IX21 1173 aa9.17□□□□□ -0.94
LINC00173-202ENST00000477702 KCTD12Q96CX2 325 aaKnown RBP9.17□□□□□ -0.94
LINC00173-202ENST00000477702 TBC1D2Q9BYX2 928 aa9.17□□□□□ -0.94
LINC00173-202ENST00000477702 RGPD3A6NKT7 1758 aaPredicted RBP9.17□□□□□ -0.94
LINC00173-202ENST00000477702 RGPD4Q7Z3J3 1758 aa9.17□□□□□ -0.94
LINC00173-202ENST00000477702 PEAK1Q9H792 1746 aa9.17□□□□□ -0.94
LINC00173-202ENST00000477702 PIK3C2GO75747 1445 aa9.16□□□□□ -0.94
LINC00173-202ENST00000477702 ATP10DQ9P241 1426 aa9.16□□□□□ -0.94
LINC00173-202ENST00000477702 MAP3K5Q99683 1374 aa9.16□□□□□ -0.94
LINC00173-202ENST00000477702 ANKRD30BQ9BXX2 1392 aa9.16□□□□□ -0.94
LINC00173-202ENST00000477702 SOWAHBA6NEL2 793 aa9.16□□□□□ -0.94
LINC00173-202ENST00000477702 C11orf95C9JLR9 678 aaPredicted RBP9.16□□□□□ -0.94
LINC00173-202ENST00000477702 CFAP70Q5T0N1 1121 aa9.16□□□□□ -0.94
LINC00173-202ENST00000477702 ZNF526Q8TF50 670 aaPredicted RBP9.16□□□□□ -0.94
LINC00173-202ENST00000477702 SPIRE2Q8WWL2 714 aa9.16□□□□□ -0.94
LINC00173-202ENST00000477702 THRAP3Q9Y2W1 955 aaKnown RBP9.16□□□□□ -0.94
LINC00173-202ENST00000477702 DHX57Q6P158 1386 aaKnown RBP9.15□□□□□ -0.94
LINC00173-202ENST00000477702 ZBTB7CA1YPR0 619 aa9.15□□□□□ -0.94
LINC00173-202ENST00000477702 CFHP08603 1231 aa9.15□□□□□ -0.94
LINC00173-202ENST00000477702 GCGRP47871 477 aa9.15□□□□□ -0.94
LINC00173-202ENST00000477702 DDB1Q16531 1140 aa9.15□□□□□ -0.94
LINC00173-202ENST00000477702 NLGN2Q8NFZ4 835 aa9.15□□□□□ -0.94
LINC00173-202ENST00000477702 C14orf93Q9H972 538 aaKnown RBP9.15□□□□□ -0.94
LINC00173-202ENST00000477702 POLR3EQ9NVU0 708 aa9.15□□□□□ -0.94
LINC00173-202ENST00000477702 HPS5Q9UPZ3 1129 aa9.15□□□□□ -0.94
LINC00173-202ENST00000477702 PHRF1Q9P1Y6 1649 aaKnown RBP9.15□□□□□ -0.94
LINC00173-202ENST00000477702 SBF2Q86WG5 1849 aa9.15□□□□□ -0.95
LINC00173-202ENST00000477702 PARP4Q9UKK3 1724 aaKnown RBP9.14□□□□□ -0.95
LINC00173-202ENST00000477702 YBX3P16989 372 aaKnown RBP eCLIP9.14□□□□□ -0.95
LINC00173-202ENST00000477702 MYSM1Q5VVJ2 828 aa9.14□□□□□ -0.95
LINC00173-202ENST00000477702 MARCH10Q8NA82 808 aaPredicted RBP9.14□□□□□ -0.95
LINC00173-202ENST00000477702 HLA-CQ95604 372 aa9.14□□□□□ -0.95
LINC00173-202ENST00000477702 ATP7BP35670 1465 aa9.14□□□□□ -0.95
LINC00173-202ENST00000477702 SPATA31E1Q6ZUB1 1445 aa9.14□□□□□ -0.95
LINC00173-202ENST00000477702 NDUFV2P19404 249 aa9.13□□□□□ -0.95
LINC00173-202ENST00000477702 NUTM1Q86Y26 1132 aa9.13□□□□□ -0.95
LINC00173-202ENST00000477702 PROCA1Q8NCQ7 364 aaPredicted RBP9.13□□□□□ -0.95
LINC00173-202ENST00000477702 MOXD2PA6NHM9 499 aa9.12□□□□□ -0.95
LINC00173-202ENST00000477702 WASLO00401 505 aaPredicted RBP9.12□□□□□ -0.95
LINC00173-202ENST00000477702 KDM4AO75164 1064 aa9.12□□□□□ -0.95
LINC00173-202ENST00000477702 SH3D19Q5HYK7 790 aa9.12□□□□□ -0.95
LINC00173-202ENST00000477702 COL13A1Q5TAT6 717 aaPredicted RBP9.12□□□□□ -0.95
LINC00173-202ENST00000477702 THSD4Q6ZMP0 1018 aa9.12□□□□□ -0.95
LINC00173-202ENST00000477702 WBP1LQ9NX94 342 aa9.12□□□□□ -0.95
LINC00173-202ENST00000477702 TRAK1Q9UPV9 953 aa9.12□□□□□ -0.95
LINC00173-202ENST00000477702 LRRC37A3O60309 1634 aa9.12□□□□□ -0.95
LINC00173-202ENST00000477702 TULP4Q9NRJ4 1543 aa9.11□□□□□ -0.95
LINC00173-202ENST00000477702 LMO7Q8WWI1 1683 aa9.11□□□□□ -0.95
LINC00173-202ENST00000477702 COL5A2P05997 1499 aaPredicted RBP9.11□□□□□ -0.95
LINC00173-202ENST00000477702 SLC4A3P48751 1232 aa9.11□□□□□ -0.95
LINC00173-202ENST00000477702 APLP1P51693 650 aa9.11□□□□□ -0.95
LINC00173-202ENST00000477702 PPP4CP60510 307 aa9.11□□□□□ -0.95
LINC00173-202ENST00000477702 GUCA2AQ02747 115 aa9.11□□□□□ -0.95
LINC00173-202ENST00000477702 FUT2Q10981 343 aa9.11□□□□□ -0.95
LINC00173-202ENST00000477702 ZNF827Q17R98 1081 aa9.11□□□□□ -0.95
LINC00173-202ENST00000477702 PPARGC1BQ86YN6 1023 aaKnown RBP9.11□□□□□ -0.95
LINC00173-202ENST00000477702 LIMD1Q9UGP4 676 aa9.11□□□□□ -0.95
LINC00173-202ENST00000477702 CRB1P82279 1406 aa9.11□□□□□ -0.95
LINC00173-202ENST00000477702 CPDO75976 1380 aa9.11□□□□□ -0.95
LINC00173-202ENST00000477702 EIF3AQ14152 1382 aaKnown RBP9.11□□□□□ -0.95
LINC00173-202ENST00000477702 GRIN3BO60391 1043 aa9.1□□□□□ -0.95
LINC00173-202ENST00000477702 POLD1P28340 1107 aa9.1□□□□□ -0.95
LINC00173-202ENST00000477702 TOM1L2Q6ZVM7 507 aa9.1□□□□□ -0.95
LINC00173-202ENST00000477702 SPNS2Q8IVW8 549 aa9.1□□□□□ -0.95
LINC00173-202ENST00000477702 ABTB2Q8N961 1025 aa9.1□□□□□ -0.95
LINC00173-202ENST00000477702 TSR3Q9UJK0 312 aaKnown RBP9.1□□□□□ -0.95
LINC00173-202ENST00000477702 PTPN5P54829 565 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms