RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 PRAMEF22A3QJZ6 481 aa29.46■■■□□ 2.31
SF1-214ENST00000477596 ADRA2BP18089 450 aa29.46■■■□□ 2.31
SF1-214ENST00000477596 SOS1Q07889 1333 aaPredicted RBP29.45■■■□□ 2.31
SF1-214ENST00000477596 MRS2Q9HD23 443 aa29.45■■■□□ 2.31
SF1-214ENST00000477596 SRP68Q9UHB9 627 aaKnown RBP29.44■■■□□ 2.3
SF1-214ENST00000477596 KLHL34Q8N239 644 aa29.43■■■□□ 2.3
SF1-214ENST00000477596 TRIM35Q9UPQ4 493 aa29.43■■■□□ 2.3
SF1-214ENST00000477596 CANXP27824 592 aaKnown RBP29.42■■■□□ 2.3
SF1-214ENST00000477596 RFC4P35249 363 aa29.42■■■□□ 2.3
SF1-214ENST00000477596 COL15A1P39059 1388 aa29.41■■■□□ 2.3
SF1-214ENST00000477596 STARD3NLO95772 234 aa29.41■■■□□ 2.3
SF1-214ENST00000477596 LMOD3Q0VAK6 560 aa29.41■■■□□ 2.3
SF1-214ENST00000477596 GYS1P13807 737 aa29.4■■■□□ 2.3
SF1-214ENST00000477596 PNISRQ8TF01 805 aaKnown RBP29.4■■■□□ 2.3
SF1-214ENST00000477596 SYT17Q9BSW7 474 aa29.4■■■□□ 2.3
SF1-214ENST00000477596 USP42Q9H9J4 1324 aaKnown RBP29.4■■■□□ 2.3
SF1-214ENST00000477596 APAF1O14727 1248 aa29.39■■■□□ 2.3
SF1-214ENST00000477596 USP16Q9Y5T5 823 aa29.39■■■□□ 2.3
SF1-214ENST00000477596 LAMB4A4D0S4 1761 aa29.39■■■□□ 2.29
SF1-214ENST00000477596 SENP3-EIF4A1A0A087X0R7 540 aa29.38■■■□□ 2.29
SF1-214ENST00000477596 A1BGP04217 495 aa29.38■■■□□ 2.29
SF1-214ENST00000477596 TEX13AQ9BXU3 409 aaPredicted RBP29.38■■■□□ 2.29
SF1-214ENST00000477596 SNRPA1P09661 255 aaKnown RBP29.37■■■□□ 2.29
SF1-214ENST00000477596 PIP4K2AP48426 406 aaPredicted RBP29.37■■■□□ 2.29
SF1-214ENST00000477596 MMP10P09238 476 aa29.36■■■□□ 2.29
SF1-214ENST00000477596 TSPYL4Q9UJ04 414 aa29.36■■■□□ 2.29
SF1-214ENST00000477596 EIF4A1P60842 406 aaKnown RBP29.35■■■□□ 2.29
SF1-214ENST00000477596 EIF5P55010 431 aaKnown RBP29.34■■■□□ 2.29
SF1-214ENST00000477596 NLGN2Q8NFZ4 835 aa29.34■■■□□ 2.29
SF1-214ENST00000477596 ZNF330Q9Y3S2 320 aaPredicted RBP29.34■■■□□ 2.29
SF1-214ENST00000477596 FKBP8Q14318 412 aa29.33■■■□□ 2.29
SF1-214ENST00000477596 USPL1Q5W0Q7 1092 aa29.33■■■□□ 2.29
SF1-214ENST00000477596 NLGN1Q8N2Q7 840 aa29.32■■■□□ 2.28
SF1-214ENST00000477596 SCN7AQ01118 1682 aa29.31■■■□□ 2.28
SF1-214ENST00000477596 ZPR1O75312 459 aa29.3■■■□□ 2.28
SF1-214ENST00000477596 GIGYF1O75420 1035 aaPredicted RBP29.3■■■□□ 2.28
SF1-214ENST00000477596 NARFQ9UHQ1 456 aa29.3■■■□□ 2.28
SF1-214ENST00000477596 IL6STP40189 918 aaPredicted RBP29.29■■■□□ 2.28
SF1-214ENST00000477596 BCL2L12Q9HB09 334 aa29.29■■■□□ 2.28
SF1-214ENST00000477596 LAS1LQ9Y4W2 734 aaKnown RBP29.29■■■□□ 2.28
SF1-214ENST00000477596 NBPF26B4DH59 902 aa29.28■■■□□ 2.28
SF1-214ENST00000477596 NBPF10Q6P3W6 841 aaKnown RBP29.28■■■□□ 2.28
SF1-214ENST00000477596 NBPF15Q8N660 670 aa29.28■■■□□ 2.28
SF1-214ENST00000477596 DDR1Q08345 913 aa29.27■■■□□ 2.28
SF1-214ENST00000477596 TBC1D2BQ9UPU7 963 aa29.26■■■□□ 2.27
SF1-214ENST00000477596 CHL1O00533 1208 aa29.25■■■□□ 2.27
SF1-214ENST00000477596 KRT24Q2M2I5 525 aa29.25■■■□□ 2.27
SF1-214ENST00000477596 BABAM1Q9NWV8 329 aa29.25■■■□□ 2.27
SF1-214ENST00000477596 BCORQ6W2J9 1755 aa29.25■■■□□ 2.27
SF1-214ENST00000477596 A0A087WZG4 1122 aa29.23■■■□□ 2.27
SF1-214ENST00000477596 FAM9BQ8IZU0 186 aa29.23■■■□□ 2.27
SF1-214ENST00000477596 CD2APQ9Y5K6 639 aa29.23■■■□□ 2.27
SF1-214ENST00000477596 C10orf71Q711Q0 1435 aa29.22■■■□□ 2.27
SF1-214ENST00000477596 PARP3Q9Y6F1 533 aa29.22■■■□□ 2.27
SF1-214ENST00000477596 KIF13BQ9NQT8 1826 aa29.22■■■□□ 2.27
SF1-214ENST00000477596 NFIXQ14938 502 aa29.21■■■□□ 2.27
SF1-214ENST00000477596 KIAA1551Q9HCM1 1747 aa29.2■■■□□ 2.27
SF1-214ENST00000477596 POLRMTO00411 1230 aaKnown RBP29.2■■■□□ 2.26
SF1-214ENST00000477596 CAMTA2O94983 1202 aa29.2■■■□□ 2.26
SF1-214ENST00000477596 TM4SF1P30408 202 aa29.2■■■□□ 2.26
SF1-214ENST00000477596 DZIP3Q86Y13 1208 aaKnown RBP29.2■■■□□ 2.26
SF1-214ENST00000477596 CFAP44Q96MT7 982 aa29.19■■■□□ 2.26
SF1-214ENST00000477596 MBIPQ9NS73 344 aa29.19■■■□□ 2.26
SF1-214ENST00000477596 AFDNP55196 1824 aaKnown RBP29.19■■■□□ 2.26
SF1-214ENST00000477596 ZNF853P0CG23 659 aa29.18■■■□□ 2.26
SF1-214ENST00000477596 BICDL1Q6ZP65 573 aa29.18■■■□□ 2.26
SF1-214ENST00000477596 NPM2Q86SE8 214 aaKnown RBP29.18■■■□□ 2.26
SF1-214ENST00000477596 TBC1D9BQ66K14 1250 aa29.17■■■□□ 2.26
SF1-214ENST00000477596 PXDNLA1KZ92 1463 aa29.17■■■□□ 2.26
SF1-214ENST00000477596 EIF2S2P20042 333 aaKnown RBP29.16■■■□□ 2.26
SF1-214ENST00000477596 PELP1Q8IZL8 1130 aaKnown RBP29.16■■■□□ 2.26
SF1-214ENST00000477596 NGEFQ8N5V2 710 aa29.16■■■□□ 2.26
SF1-214ENST00000477596 WWC3Q9ULE0 1092 aa29.16■■■□□ 2.26
SF1-214ENST00000477596 N4BP2Q86UW6 1770 aaPredicted RBP29.16■■■□□ 2.26
SF1-214ENST00000477596 NRXN2Q9P2S2 1712 aa29.15■■■□□ 2.26
SF1-214ENST00000477596 MYL6BP14649 208 aa29.15■■■□□ 2.26
SF1-214ENST00000477596 NECTIN2Q92692 538 aa29.15■■■□□ 2.26
SF1-214ENST00000477596 IFT57Q9NWB7 429 aa29.15■■■□□ 2.26
SF1-214ENST00000477596 SALL2Q9Y467 1007 aaPredicted RBP29.14■■■□□ 2.26
SF1-214ENST00000477596 GOLGB1Q14789 3259 aaKnown RBP29.14■■■□□ 2.25
SF1-214ENST00000477596 ANXA1P04083 346 aa29.13■■■□□ 2.25
SF1-214ENST00000477596 PROSER3Q2NL68 480 aa29.13■■■□□ 2.25
SF1-214ENST00000477596 WWC1Q8IX03 1113 aa29.13■■■□□ 2.25
SF1-214ENST00000477596 DCAF8L1A6NGE4 600 aa29.12■■■□□ 2.25
SF1-214ENST00000477596 GNAI1P63096 354 aa29.12■■■□□ 2.25
SF1-214ENST00000477596 CALD1Q05682 793 aaKnown RBP29.12■■■□□ 2.25
SF1-214ENST00000477596 CCDC27Q2M243 656 aa29.12■■■□□ 2.25
SF1-214ENST00000477596 YBX3P16989 372 aaKnown RBP eCLIP29.11■■■□□ 2.25
SF1-214ENST00000477596 PDIA6Q15084 440 aa29.11■■■□□ 2.25
SF1-214ENST00000477596 GPR162Q16538 588 aa29.11■■■□□ 2.25
SF1-214ENST00000477596 SERPINB2P05120 415 aa29.1■■■□□ 2.25
SF1-214ENST00000477596 TTLL7Q6ZT98 887 aa29.1■■■□□ 2.25
SF1-214ENST00000477596 ERBB4Q15303 1308 aa29.1■■■□□ 2.25
SF1-214ENST00000477596 CARMIL3Q8ND23 1372 aa29.1■■■□□ 2.25
SF1-214ENST00000477596 UTRNP46939 3433 aa29.09■■■□□ 2.25
SF1-214ENST00000477596 LRP10Q7Z4F1 713 aa29.09■■■□□ 2.25
SF1-214ENST00000477596 A0A0G2JLW4 131 aa29.08■■■□□ 2.25
SF1-214ENST00000477596 HLFQ16534 295 aa29.08■■■□□ 2.25
SF1-214ENST00000477596 TSR2Q969E8 191 aaKnown RBP29.08■■■□□ 2.25
SF1-214ENST00000477596 DUSP27Q5VZP5 1158 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms