RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 SLC27A3Q5K4L6 730 aa20.83■□□□□ 0.93
VHL-203ENST00000477538 NECTIN2Q92692 538 aa20.83■□□□□ 0.93
VHL-203ENST00000477538 CCDC30Q5VVM6 783 aa20.82■□□□□ 0.92
VHL-203ENST00000477538 ZNF428Q96B54 188 aa20.82■□□□□ 0.92
VHL-203ENST00000477538 CHMP4AQ9BY43 222 aa20.82■□□□□ 0.92
VHL-203ENST00000477538 STARD3NLO95772 234 aa20.81■□□□□ 0.92
VHL-203ENST00000477538 CYP19A1P11511 503 aaPredicted RBP20.81■□□□□ 0.92
VHL-203ENST00000477538 EN1Q05925 392 aaPredicted RBP20.81■□□□□ 0.92
VHL-203ENST00000477538 UPF1Q92900 1129 aaKnown RBP eCLIP20.81■□□□□ 0.92
VHL-203ENST00000477538 LRRC4BQ9NT99 713 aa20.81■□□□□ 0.92
VHL-203ENST00000477538 CENPBP07199 599 aaPredicted RBP20.8■□□□□ 0.92
VHL-203ENST00000477538 DEFB132Q7Z7B7 95 aa20.8■□□□□ 0.92
VHL-203ENST00000477538 PROM2Q8N271 834 aa20.8■□□□□ 0.92
VHL-203ENST00000477538 LINC00116Q8NCU8 138 aa20.8■□□□□ 0.92
VHL-203ENST00000477538 CAMKK2Q96RR4 588 aa20.8■□□□□ 0.92
VHL-203ENST00000477538 TCERG1O14776 1098 aaKnown RBP20.79■□□□□ 0.92
VHL-203ENST00000477538 EZH2Q15910 746 aaKnown RBP20.79■□□□□ 0.92
VHL-203ENST00000477538 STK31Q9BXU1 1019 aa20.79■□□□□ 0.92
VHL-203ENST00000477538 ERBB4Q15303 1308 aa20.78■□□□□ 0.92
VHL-203ENST00000477538 CRKLP46109 303 aaKnown RBP20.78■□□□□ 0.92
VHL-203ENST00000477538 RARSP54136 660 aaKnown RBP20.78■□□□□ 0.92
VHL-203ENST00000477538 ALDH1L2Q3SY69 923 aa20.78■□□□□ 0.92
VHL-203ENST00000477538 CHPF2Q9P2E5 772 aa20.78■□□□□ 0.92
VHL-203ENST00000477538 RCAN3Q9UKA8 241 aa20.78■□□□□ 0.92
VHL-203ENST00000477538 C4AP0C0L4 1744 aa20.78■□□□□ 0.92
VHL-203ENST00000477538 QSER1Q2KHR3 1735 aa20.78■□□□□ 0.92
VHL-203ENST00000477538 CNTNAP4Q9C0A0 1308 aa20.78■□□□□ 0.92
VHL-203ENST00000477538 A1BGP04217 495 aa20.77■□□□□ 0.92
VHL-203ENST00000477538 HMGB2P26583 209 aaKnown RBP20.77■□□□□ 0.92
VHL-203ENST00000477538 SSH1Q8WYL5 1049 aa20.77■□□□□ 0.92
VHL-203ENST00000477538 BCL2L13Q9BXK5 485 aa20.77■□□□□ 0.92
VHL-203ENST00000477538 CCDC87Q9NVE4 849 aa20.77■□□□□ 0.92
VHL-203ENST00000477538 DBF4Q9UBU7 674 aaPredicted RBP20.77■□□□□ 0.92
VHL-203ENST00000477538 SMC4Q9NTJ3 1288 aa20.76■□□□□ 0.91
VHL-203ENST00000477538 ARFGEF2Q9Y6D5 1785 aa20.75■□□□□ 0.91
VHL-203ENST00000477538 PIP4K2AP48426 406 aaPredicted RBP20.75■□□□□ 0.91
VHL-203ENST00000477538 DDX21Q9NR30 783 aaKnown RBP eCLIP20.75■□□□□ 0.91
VHL-203ENST00000477538 ZBTB1Q9Y2K1 713 aa20.75■□□□□ 0.91
VHL-203ENST00000477538 NUP98P52948 1817 aa20.75■□□□□ 0.91
VHL-203ENST00000477538 BCORQ6W2J9 1755 aa20.74■□□□□ 0.91
VHL-203ENST00000477538 NBPF26B4DH59 902 aa20.74■□□□□ 0.91
VHL-203ENST00000477538 ANXA1P04083 346 aa20.74■□□□□ 0.91
VHL-203ENST00000477538 SLC4A2P04920 1241 aa20.74■□□□□ 0.91
VHL-203ENST00000477538 MYL6BP14649 208 aa20.74■□□□□ 0.91
VHL-203ENST00000477538 CANXP27824 592 aaKnown RBP20.74■□□□□ 0.91
VHL-203ENST00000477538 PDIA6Q15084 440 aa20.74■□□□□ 0.91
VHL-203ENST00000477538 PROSER3Q2NL68 480 aa20.74■□□□□ 0.91
VHL-203ENST00000477538 RC3H1Q5TC82 1133 aaKnown RBP20.74■□□□□ 0.91
VHL-203ENST00000477538 NBPF14Q5TI25 921 aa20.74■□□□□ 0.91
VHL-203ENST00000477538 NBPF10Q6P3W6 841 aaKnown RBP20.74■□□□□ 0.91
VHL-203ENST00000477538 INTS5Q6P9B9 1019 aaKnown RBP20.74■□□□□ 0.91
VHL-203ENST00000477538 NBPF15Q8N660 670 aa20.74■□□□□ 0.91
VHL-203ENST00000477538 MRPL50Q8N5N7 158 aaKnown RBP20.73■□□□□ 0.91
VHL-203ENST00000477538 HYPKQ9NX55 129 aa20.73■□□□□ 0.91
VHL-203ENST00000477538 N4BP2Q86UW6 1770 aaPredicted RBP20.72■□□□□ 0.91
VHL-203ENST00000477538 BCAR3O75815 825 aa20.72■□□□□ 0.91
VHL-203ENST00000477538 AK7Q96M32 723 aa20.72■□□□□ 0.91
VHL-203ENST00000477538 ANKRD36CQ5JPF3 1778 aa20.72■□□□□ 0.91
VHL-203ENST00000477538 AFDNP55196 1824 aaKnown RBP20.71■□□□□ 0.91
VHL-203ENST00000477538 SCN7AQ01118 1682 aa20.7■□□□□ 0.91
VHL-203ENST00000477538 GNPATO15228 680 aa20.7■□□□□ 0.9
VHL-203ENST00000477538 IL6STP40189 918 aaPredicted RBP20.7■□□□□ 0.9
VHL-203ENST00000477538 BRPF1P55201 1214 aaPredicted RBP20.7■□□□□ 0.9
VHL-203ENST00000477538 G2E3Q7L622 706 aa20.7■□□□□ 0.9
VHL-203ENST00000477538 LRP10Q7Z4F1 713 aa20.7■□□□□ 0.9
VHL-203ENST00000477538 ZNF330Q9Y3S2 320 aaPredicted RBP20.7■□□□□ 0.9
VHL-203ENST00000477538 KIF16BQ96L93 1317 aa20.7■□□□□ 0.9
VHL-203ENST00000477538 RPS6KA4O75676 772 aa20.69■□□□□ 0.9
VHL-203ENST00000477538 PHAXQ9H814 394 aaKnown RBP20.69■□□□□ 0.9
VHL-203ENST00000477538 COL15A1P39059 1388 aa20.69■□□□□ 0.9
VHL-203ENST00000477538 EIF5P55010 431 aaKnown RBP20.68■□□□□ 0.9
VHL-203ENST00000477538 FLIIQ13045 1269 aa20.68■□□□□ 0.9
VHL-203ENST00000477538 NPM2Q86SE8 214 aaKnown RBP20.68■□□□□ 0.9
VHL-203ENST00000477538 AKT1S1Q96B36 256 aa20.68■□□□□ 0.9
VHL-203ENST00000477538 RTCBQ9Y3I0 505 aaKnown RBP20.68■□□□□ 0.9
VHL-203ENST00000477538 ZNF827Q17R98 1081 aa20.67■□□□□ 0.9
VHL-203ENST00000477538 XAGE3Q8WTP9 111 aa20.67■□□□□ 0.9
VHL-203ENST00000477538 AIMP1Q12904 312 aaKnown RBP20.66■□□□□ 0.9
VHL-203ENST00000477538 COPS6Q7L5N1 327 aa20.66■□□□□ 0.9
VHL-203ENST00000477538 FRAT1Q92837 279 aaPredicted RBP20.66■□□□□ 0.9
VHL-203ENST00000477538 NOB1Q9ULX3 412 aaKnown RBP20.66■□□□□ 0.9
VHL-203ENST00000477538 PTPRCP08575 1304 aa20.65■□□□□ 0.9
VHL-203ENST00000477538 FKBP5Q13451 457 aaPredicted RBP20.65■□□□□ 0.9
VHL-203ENST00000477538 ANO8Q9HCE9 1232 aaPredicted RBP20.65■□□□□ 0.9
VHL-203ENST00000477538 STK32BQ9NY57 414 aa20.65■□□□□ 0.9
VHL-203ENST00000477538 PHF14O94880 888 aa20.64■□□□□ 0.89
VHL-203ENST00000477538 AMIGO3Q86WK7 504 aa20.64■□□□□ 0.89
VHL-203ENST00000477538 TFCP2L1Q9NZI6 479 aa20.64■□□□□ 0.89
VHL-203ENST00000477538 A0A087WZG4 1122 aa20.63■□□□□ 0.89
VHL-203ENST00000477538 IPO8O15397 1037 aaKnown RBP20.63■□□□□ 0.89
VHL-203ENST00000477538 DDX58O95786 925 aaKnown RBP20.63■□□□□ 0.89
VHL-203ENST00000477538 ADRA2BP18089 450 aa20.63■□□□□ 0.89
VHL-203ENST00000477538 SSFA2P28290 1259 aa20.63■□□□□ 0.89
VHL-203ENST00000477538 ZKSCAN2Q63HK3 967 aa20.63■□□□□ 0.89
VHL-203ENST00000477538 KIF6Q6ZMV9 814 aa20.63■□□□□ 0.89
VHL-203ENST00000477538 TTLL7Q6ZT98 887 aa20.63■□□□□ 0.89
VHL-203ENST00000477538 SMIM5Q71RC9 77 aa20.63■□□□□ 0.89
VHL-203ENST00000477538 DZIP3Q86Y13 1208 aaKnown RBP20.63■□□□□ 0.89
VHL-203ENST00000477538 ARXQ96QS3 562 aa20.63■□□□□ 0.89
VHL-203ENST00000477538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms