RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 YBX3P16989 372 aaKnown RBP eCLIP20.64■□□□□ 0.89
COMMD6-209ENST00000477377 TAF7Q15545 349 aaPredicted RBP20.64■□□□□ 0.89
COMMD6-209ENST00000477377 THUMPD2Q9BTF0 503 aaKnown RBP20.64■□□□□ 0.89
COMMD6-209ENST00000477377 MIS18AQ9NYP9 233 aa20.64■□□□□ 0.89
COMMD6-209ENST00000477377 USP16Q9Y5T5 823 aa20.64■□□□□ 0.89
COMMD6-209ENST00000477377 TM4SF1P30408 202 aa20.63■□□□□ 0.89
COMMD6-209ENST00000477377 USPL1Q5W0Q7 1092 aa20.63■□□□□ 0.89
COMMD6-209ENST00000477377 COL15A1P39059 1388 aa20.62■□□□□ 0.89
COMMD6-209ENST00000477377 DCAF8L1A6NGE4 600 aa20.62■□□□□ 0.89
COMMD6-209ENST00000477377 STARD3NLO95772 234 aa20.62■□□□□ 0.89
COMMD6-209ENST00000477377 A1BGP04217 495 aa20.62■□□□□ 0.89
COMMD6-209ENST00000477377 CANXP27824 592 aaKnown RBP20.62■□□□□ 0.89
COMMD6-209ENST00000477377 DDR1Q08345 913 aa20.62■□□□□ 0.89
COMMD6-209ENST00000477377 TEX13AQ9BXU3 409 aaPredicted RBP20.62■□□□□ 0.89
COMMD6-209ENST00000477377 PNNQ9H307 717 aaKnown RBP20.62■□□□□ 0.89
COMMD6-209ENST00000477377 NARFQ9UHQ1 456 aa20.62■□□□□ 0.89
COMMD6-209ENST00000477377 ZNF316A6NFI3 1004 aaPredicted RBP20.61■□□□□ 0.89
COMMD6-209ENST00000477377 ADAMTS8Q9UP79 889 aa20.61■□□□□ 0.89
COMMD6-209ENST00000477377 KIF13BQ9NQT8 1826 aa20.61■□□□□ 0.89
COMMD6-209ENST00000477377 TMPOP42166 694 aaKnown RBP20.6■□□□□ 0.89
COMMD6-209ENST00000477377 GPR162Q16538 588 aa20.6■□□□□ 0.89
COMMD6-209ENST00000477377 KIAA1551Q9HCM1 1747 aa20.6■□□□□ 0.89
COMMD6-209ENST00000477377 MAPK8IP3Q9UPT6 1336 aa20.59■□□□□ 0.89
COMMD6-209ENST00000477377 NEFMP07197 916 aa20.59■□□□□ 0.89
COMMD6-209ENST00000477377 YY1P25490 414 aa20.59■□□□□ 0.89
COMMD6-209ENST00000477377 CCDC146Q8IYE0 955 aa20.59■□□□□ 0.89
COMMD6-209ENST00000477377 C10orf71Q711Q0 1435 aa20.59■□□□□ 0.89
COMMD6-209ENST00000477377 POLRMTO00411 1230 aaKnown RBP20.58■□□□□ 0.89
COMMD6-209ENST00000477377 SNRPA1P09661 255 aaKnown RBP20.58■□□□□ 0.89
COMMD6-209ENST00000477377 RIPK4P57078 832 aa20.58■□□□□ 0.89
COMMD6-209ENST00000477377 CCDC184Q52MB2 194 aa20.58■□□□□ 0.89
COMMD6-209ENST00000477377 KDM3BQ7LBC6 1761 aa20.58■□□□□ 0.89
COMMD6-209ENST00000477377 ZPR1O75312 459 aa20.57■□□□□ 0.88
COMMD6-209ENST00000477377 IL6STP40189 918 aaPredicted RBP20.57■□□□□ 0.88
COMMD6-209ENST00000477377 PXDNLA1KZ92 1463 aa20.56■□□□□ 0.88
COMMD6-209ENST00000477377 NBPF26B4DH59 902 aa20.56■□□□□ 0.88
COMMD6-209ENST00000477377 PIP4K2AP48426 406 aaPredicted RBP20.56■□□□□ 0.88
COMMD6-209ENST00000477377 EIF4A1P60842 406 aaKnown RBP20.56■□□□□ 0.88
COMMD6-209ENST00000477377 NFIXQ14938 502 aa20.56■□□□□ 0.88
COMMD6-209ENST00000477377 NBPF10Q6P3W6 841 aaKnown RBP20.56■□□□□ 0.88
COMMD6-209ENST00000477377 NBPF15Q8N660 670 aa20.56■□□□□ 0.88
COMMD6-209ENST00000477377 PARP3Q9Y6F1 533 aa20.56■□□□□ 0.88
COMMD6-209ENST00000477377 PELP1Q8IZL8 1130 aaKnown RBP20.55■□□□□ 0.88
COMMD6-209ENST00000477377 RUNDC1Q96C34 613 aa20.55■□□□□ 0.88
COMMD6-209ENST00000477377 TRIM35Q9UPQ4 493 aa20.55■□□□□ 0.88
COMMD6-209ENST00000477377 RRP7AQ9Y3A4 280 aaKnown RBP20.55■□□□□ 0.88
COMMD6-209ENST00000477377 GIGYF1O75420 1035 aaPredicted RBP20.54■□□□□ 0.88
COMMD6-209ENST00000477377 KCNA3P22001 575 aa20.54■□□□□ 0.88
COMMD6-209ENST00000477377 TGFB2P61812 414 aa20.54■□□□□ 0.88
COMMD6-209ENST00000477377 PNISRQ8TF01 805 aaKnown RBP20.54■□□□□ 0.88
COMMD6-209ENST00000477377 TBC1D2BQ9UPU7 963 aa20.54■□□□□ 0.88
COMMD6-209ENST00000477377 A0A087WZG4 1122 aa20.53■□□□□ 0.88
COMMD6-209ENST00000477377 NRXN2Q9P2S2 1712 aa20.53■□□□□ 0.88
COMMD6-209ENST00000477377 A0A0G2JLW4 131 aa20.52■□□□□ 0.88
COMMD6-209ENST00000477377 CAMTA2O94983 1202 aa20.52■□□□□ 0.88
COMMD6-209ENST00000477377 WDR43Q15061 677 aaKnown RBP eCLIP20.52■□□□□ 0.88
COMMD6-209ENST00000477377 WWC3Q9ULE0 1092 aa20.52■□□□□ 0.88
COMMD6-209ENST00000477377 CHD4Q14839 1912 aa20.52■□□□□ 0.88
COMMD6-209ENST00000477377 N4BP2Q86UW6 1770 aaPredicted RBP20.51■□□□□ 0.87
COMMD6-209ENST00000477377 DPEP1P16444 411 aa20.51■□□□□ 0.87
COMMD6-209ENST00000477377 TBC1D9BQ66K14 1250 aa20.51■□□□□ 0.87
COMMD6-209ENST00000477377 GRIN3BO60391 1043 aa20.5■□□□□ 0.87
COMMD6-209ENST00000477377 SCN7AQ01118 1682 aa20.5■□□□□ 0.87
COMMD6-209ENST00000477377 AFDNP55196 1824 aaKnown RBP20.5■□□□□ 0.87
COMMD6-209ENST00000477377 NEUROD2Q15784 382 aa20.49■□□□□ 0.87
COMMD6-209ENST00000477377 ZNF330Q9Y3S2 320 aaPredicted RBP20.49■□□□□ 0.87
COMMD6-209ENST00000477377 SERPINB2P05120 415 aa20.48■□□□□ 0.87
COMMD6-209ENST00000477377 BABAM1Q9NWV8 329 aa20.48■□□□□ 0.87
COMMD6-209ENST00000477377 BRCA1P38398 1863 aaKnown RBP20.47■□□□□ 0.87
COMMD6-209ENST00000477377 CHL1O00533 1208 aa20.47■□□□□ 0.87
COMMD6-209ENST00000477377 DZIP3Q86Y13 1208 aaKnown RBP20.47■□□□□ 0.87
COMMD6-209ENST00000477377 LAMB4A4D0S4 1761 aa20.46■□□□□ 0.87
COMMD6-209ENST00000477377 LMOD3Q0VAK6 560 aa20.46■□□□□ 0.87
COMMD6-209ENST00000477377 BICDL1Q6ZP65 573 aa20.46■□□□□ 0.87
COMMD6-209ENST00000477377 TSPYL4Q9UJ04 414 aa20.46■□□□□ 0.87
COMMD6-209ENST00000477377 BCORQ6W2J9 1755 aa20.46■□□□□ 0.87
COMMD6-209ENST00000477377 CARMIL3Q8ND23 1372 aa20.46■□□□□ 0.87
COMMD6-209ENST00000477377 CHRNA5P30532 468 aa20.45■□□□□ 0.86
COMMD6-209ENST00000477377 LRP10Q7Z4F1 713 aa20.45■□□□□ 0.86
COMMD6-209ENST00000477377 ZNF784Q8NCA9 323 aaPredicted RBP20.45■□□□□ 0.86
COMMD6-209ENST00000477377 APAF1O14727 1248 aa20.44■□□□□ 0.86
COMMD6-209ENST00000477377 PDIA6Q15084 440 aa20.43■□□□□ 0.86
COMMD6-209ENST00000477377 CLEC4GQ6UXB4 293 aa20.43■□□□□ 0.86
COMMD6-209ENST00000477377 HLFQ16534 295 aa20.42■□□□□ 0.86
COMMD6-209ENST00000477377 KRT24Q2M2I5 525 aa20.42■□□□□ 0.86
COMMD6-209ENST00000477377 RGL2O15211 777 aa20.41■□□□□ 0.86
COMMD6-209ENST00000477377 ZNF853P0CG23 659 aa20.41■□□□□ 0.86
COMMD6-209ENST00000477377 PRR5LQ6MZQ0 368 aa20.41■□□□□ 0.86
COMMD6-209ENST00000477377 BCS1LQ9Y276 419 aa20.41■□□□□ 0.86
COMMD6-209ENST00000477377 TTLL7Q6ZT98 887 aa20.4■□□□□ 0.86
COMMD6-209ENST00000477377 CCDC24Q8N4L8 307 aa20.4■□□□□ 0.86
COMMD6-209ENST00000477377 PIM2Q9P1W9 311 aa20.4■□□□□ 0.86
COMMD6-209ENST00000477377 ANKRD31Q8N7Z5 1873 aa20.39■□□□□ 0.86
COMMD6-209ENST00000477377 SETDB2Q96T68 719 aa20.39■□□□□ 0.85
COMMD6-209ENST00000477377 ANP32CO43423 234 aa20.38■□□□□ 0.85
COMMD6-209ENST00000477377 PROSER3Q2NL68 480 aa20.38■□□□□ 0.85
COMMD6-209ENST00000477377 NPM2Q86SE8 214 aaKnown RBP20.38■□□□□ 0.85
COMMD6-209ENST00000477377 CFAP44Q96MT7 982 aa20.38■□□□□ 0.85
COMMD6-209ENST00000477377 ADCY9O60503 1353 aa20.37■□□□□ 0.85
COMMD6-209ENST00000477377 ERBB4Q15303 1308 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms