RNA–Protein interactions for RNA: ENST00000476916.5

KPNA1-206, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-206ENST00000476916 TULP4Q9NRJ4 1543 aa11.11□□□□□ -0.63
KPNA1-206ENST00000476916 KDM4AO75164 1064 aa11.11□□□□□ -0.63
KPNA1-206ENST00000476916 USP46P62068 366 aa11.11□□□□□ -0.63
KPNA1-206ENST00000476916 PACS2Q86VP3 889 aa11.11□□□□□ -0.63
KPNA1-206ENST00000476916 NPHP3Q7Z494 1330 aa11.1□□□□□ -0.63
KPNA1-206ENST00000476916 XRN1Q8IZH2 1706 aaKnown RBP11.1□□□□□ -0.63
KPNA1-206ENST00000476916 CABLES1Q8TDN4 633 aa11.1□□□□□ -0.63
KPNA1-206ENST00000476916 NDUFB9Q9Y6M9 179 aa11.1□□□□□ -0.63
KPNA1-206ENST00000476916 MTUS2Q5JR59 1369 aa11.1□□□□□ -0.63
KPNA1-206ENST00000476916 CCDC18Q5T9S5 1454 aa11.1□□□□□ -0.63
KPNA1-206ENST00000476916 MBD5Q9P267 1494 aa11.1□□□□□ -0.63
KPNA1-206ENST00000476916 SPATA31A5Q5VU36 1347 aa11.09□□□□□ -0.63
KPNA1-206ENST00000476916 SPATA31A7Q8IWB4 1347 aa11.09□□□□□ -0.63
KPNA1-206ENST00000476916 PLSCR1O15162 318 aa11.09□□□□□ -0.63
KPNA1-206ENST00000476916 ZBTB3Q9H5J0 574 aa11.09□□□□□ -0.63
KPNA1-206ENST00000476916 CASKIN1Q8WXD9 1431 aa11.09□□□□□ -0.63
KPNA1-206ENST00000476916 CTCFP49711 727 aaPredicted RBP11.08□□□□□ -0.64
KPNA1-206ENST00000476916 SLC15A2Q16348 729 aa11.08□□□□□ -0.64
KPNA1-206ENST00000476916 STK32BQ9NY57 414 aa11.08□□□□□ -0.64
KPNA1-206ENST00000476916 TMEM88BA6NKF7 163 aa11.07□□□□□ -0.64
KPNA1-206ENST00000476916 HOXA2O43364 376 aa11.07□□□□□ -0.64
KPNA1-206ENST00000476916 HMGB1P09429 215 aaKnown RBP11.07□□□□□ -0.64
KPNA1-206ENST00000476916 GCGRP47871 477 aa11.07□□□□□ -0.64
KPNA1-206ENST00000476916 XPCQ01831 940 aaPredicted RBP11.07□□□□□ -0.64
KPNA1-206ENST00000476916 RDH13Q8NBN7 331 aa11.07□□□□□ -0.64
KPNA1-206ENST00000476916 NMRK2Q9NPI5 230 aa11.07□□□□□ -0.64
KPNA1-206ENST00000476916 PALM3A6NDB9 673 aaPredicted RBP11.06□□□□□ -0.64
KPNA1-206ENST00000476916 ATG7O95352 703 aa11.06□□□□□ -0.64
KPNA1-206ENST00000476916 CFDP1Q9UEE9 299 aaPredicted RBP11.06□□□□□ -0.64
KPNA1-206ENST00000476916 RIMS2Q9UQ26 1411 aa11.06□□□□□ -0.64
KPNA1-206ENST00000476916 POTEJP0CG39 1038 aa11.05□□□□□ -0.64
KPNA1-206ENST00000476916 FDX1P10109 184 aa11.05□□□□□ -0.64
KPNA1-206ENST00000476916 LMOD1P29536 600 aaPredicted RBP11.05□□□□□ -0.64
KPNA1-206ENST00000476916 PRAG1Q86YV5 1406 aa11.05□□□□□ -0.64
KPNA1-206ENST00000476916 ALG2Q9H553 416 aa11.05□□□□□ -0.64
KPNA1-206ENST00000476916 USP35Q9P2H5 1018 aa11.05□□□□□ -0.64
KPNA1-206ENST00000476916 GNEQ9Y223 722 aaKnown RBP11.05□□□□□ -0.64
KPNA1-206ENST00000476916 SMAPO00193 183 aa11.04□□□□□ -0.64
KPNA1-206ENST00000476916 RSPH4AQ5TD94 716 aa11.04□□□□□ -0.64
KPNA1-206ENST00000476916 PCDHGC3Q9UN70 934 aa11.04□□□□□ -0.64
KPNA1-206ENST00000476916 UNCXA6NJT0 531 aa11.03□□□□□ -0.64
KPNA1-206ENST00000476916 GPR37L1O60883 481 aa11.03□□□□□ -0.64
KPNA1-206ENST00000476916 HDGFP51858 240 aaKnown RBP11.03□□□□□ -0.64
KPNA1-206ENST00000476916 LBX1P52954 281 aa11.03□□□□□ -0.64
KPNA1-206ENST00000476916 COL24A1Q17RW2 1714 aa11.02□□□□□ -0.65
KPNA1-206ENST00000476916 C16orf71Q8IYS4 520 aaPredicted RBP11.02□□□□□ -0.65
KPNA1-206ENST00000476916 TRIM34Q9BYJ4 488 aa11.02□□□□□ -0.65
KPNA1-206ENST00000476916 IGSF5Q9NSI5 407 aa11.02□□□□□ -0.65
KPNA1-206ENST00000476916 BTG4Q9NY30 223 aa11.02□□□□□ -0.65
KPNA1-206ENST00000476916 SPATA31A3Q5VYP0 1347 aa11.02□□□□□ -0.65
KPNA1-206ENST00000476916 ABCA3Q99758 1704 aa11.01□□□□□ -0.65
KPNA1-206ENST00000476916 MYO5BQ9ULV0 1848 aa11.01□□□□□ -0.65
KPNA1-206ENST00000476916 RBM47A0AV96 593 aaKnown RBP11.01□□□□□ -0.65
KPNA1-206ENST00000476916 CTDSPL2Q05D32 466 aa11.01□□□□□ -0.65
KPNA1-206ENST00000476916 PROX2Q3B8N5 592 aa11.01□□□□□ -0.65
KPNA1-206ENST00000476916 ZNF644Q9H582 1327 aaPredicted RBP11.01□□□□□ -0.65
KPNA1-206ENST00000476916 CACNA1AO00555 2505 aa11□□□□□ -0.65
KPNA1-206ENST00000476916 FOXO3O43524 673 aa11□□□□□ -0.65
KPNA1-206ENST00000476916 SLC10A3P09131 477 aa11□□□□□ -0.65
KPNA1-206ENST00000476916 VAC14Q08AM6 782 aa11□□□□□ -0.65
KPNA1-206ENST00000476916 PDE3BQ13370 1112 aa11□□□□□ -0.65
KPNA1-206ENST00000476916 HMX1Q9NP08 348 aaPredicted RBP11□□□□□ -0.65
KPNA1-206ENST00000476916 TFIP11Q9UBB9 837 aaKnown RBP11□□□□□ -0.65
KPNA1-206ENST00000476916 EIF2AK4Q9P2K8 1649 aaKnown RBP10.99□□□□□ -0.65
KPNA1-206ENST00000476916 HSP90B1P14625 803 aaKnown RBP10.99□□□□□ -0.65
KPNA1-206ENST00000476916 POLD1P28340 1107 aa10.99□□□□□ -0.65
KPNA1-206ENST00000476916 GCC1Q96CN9 775 aa10.99□□□□□ -0.65
KPNA1-206ENST00000476916 HABP4Q5JVS0 413 aaKnown RBP10.98□□□□□ -0.65
KPNA1-206ENST00000476916 B4GALNT3Q6L9W6 998 aa10.98□□□□□ -0.65
KPNA1-206ENST00000476916 SLC17A8Q8NDX2 589 aa10.98□□□□□ -0.65
KPNA1-206ENST00000476916 AIDAQ96BJ3 306 aa10.98□□□□□ -0.65
KPNA1-206ENST00000476916 PUS7Q96PZ0 661 aaKnown RBP10.98□□□□□ -0.65
KPNA1-206ENST00000476916 UCN2Q96RP3 112 aa10.98□□□□□ -0.65
KPNA1-206ENST00000476916 RRBP1Q9P2E9 1410 aaKnown RBP10.98□□□□□ -0.65
KPNA1-206ENST00000476916 GUCA2AQ02747 115 aa10.97□□□□□ -0.65
KPNA1-206ENST00000476916 MTMR2Q13614 643 aa10.97□□□□□ -0.65
KPNA1-206ENST00000476916 HELBQ8NG08 1087 aaPredicted RBP10.97□□□□□ -0.65
KPNA1-206ENST00000476916 KIAA1468Q9P260 1216 aa10.97□□□□□ -0.65
KPNA1-206ENST00000476916 SPATA31A1Q5TZJ5 1347 aa10.96□□□□□ -0.65
KPNA1-206ENST00000476916 HOXB1P14653 301 aaPredicted RBP10.96□□□□□ -0.65
KPNA1-206ENST00000476916 SOX11P35716 441 aa10.96□□□□□ -0.65
KPNA1-206ENST00000476916 CDCA8Q53HL2 280 aa10.96□□□□□ -0.65
KPNA1-206ENST00000476916 HLA-CQ95604 372 aa10.96□□□□□ -0.65
KPNA1-206ENST00000476916 LRPPRCP42704 1394 aaKnown RBP10.95□□□□□ -0.66
KPNA1-206ENST00000476916 ESCO1Q5FWF5 840 aa10.95□□□□□ -0.66
KPNA1-206ENST00000476916 SWT1Q5T5J6 900 aaKnown RBP10.95□□□□□ -0.66
KPNA1-206ENST00000476916 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.95□□□□□ -0.66
KPNA1-206ENST00000476916 KCNK17Q96T54 332 aa10.95□□□□□ -0.66
KPNA1-206ENST00000476916 ZBED2Q9BTP6 218 aa10.95□□□□□ -0.66
KPNA1-206ENST00000476916 SBF2Q86WG5 1849 aa10.94□□□□□ -0.66
KPNA1-206ENST00000476916 SMC1BQ8NDV3 1235 aa10.94□□□□□ -0.66
KPNA1-206ENST00000476916 PRR7Q8TB68 274 aa10.94□□□□□ -0.66
KPNA1-206ENST00000476916 SLC52A1Q9NWF4 448 aa10.94□□□□□ -0.66
KPNA1-206ENST00000476916 MAFBQ9Y5Q3 323 aaPredicted RBP10.94□□□□□ -0.66
KPNA1-206ENST00000476916 COL14A1Q05707 1796 aaKnown RBP10.94□□□□□ -0.66
KPNA1-206ENST00000476916 TOPAZ1Q8N9V7 1692 aa10.94□□□□□ -0.66
KPNA1-206ENST00000476916 CCDC141Q6ZP82 1450 aa10.93□□□□□ -0.66
KPNA1-206ENST00000476916 CFAP99D6REC4 459 aa10.93□□□□□ -0.66
KPNA1-206ENST00000476916 POTEB2H3BUK9 544 aa10.93□□□□□ -0.66
KPNA1-206ENST00000476916 HSPA8P11142 646 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms