RNA–Protein interactions for RNA: ENST00000476743.5

MSL3-213, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-213ENST00000476743 NLGN2Q8NFZ4 835 aa18.15■□□□□ 0.5
MSL3-213ENST00000476743 COL15A1P39059 1388 aa18.15■□□□□ 0.5
MSL3-213ENST00000476743 UTRNP46939 3433 aa18.14■□□□□ 0.49
MSL3-213ENST00000476743 DCAF8L1A6NGE4 600 aa18.14■□□□□ 0.49
MSL3-213ENST00000476743 GOLGB1Q14789 3259 aaKnown RBP18.14■□□□□ 0.49
MSL3-213ENST00000476743 TMPOP42166 694 aaKnown RBP18.13■□□□□ 0.49
MSL3-213ENST00000476743 EIF5P55010 431 aaKnown RBP18.13■□□□□ 0.49
MSL3-213ENST00000476743 WDR43Q15061 677 aaKnown RBP eCLIP18.13■□□□□ 0.49
MSL3-213ENST00000476743 KLHL34Q8N239 644 aa18.13■□□□□ 0.49
MSL3-213ENST00000476743 PNISRQ8TF01 805 aaKnown RBP18.13■□□□□ 0.49
MSL3-213ENST00000476743 SRP68Q9UHB9 627 aaKnown RBP18.13■□□□□ 0.49
MSL3-213ENST00000476743 ADAMTS8Q9UP79 889 aa18.13■□□□□ 0.49
MSL3-213ENST00000476743 KIAA1551Q9HCM1 1747 aa18.12■□□□□ 0.49
MSL3-213ENST00000476743 LAMB4A4D0S4 1761 aa18.12■□□□□ 0.49
MSL3-213ENST00000476743 RUNDC1Q96C34 613 aa18.12■□□□□ 0.49
MSL3-213ENST00000476743 NARFQ9UHQ1 456 aa18.12■□□□□ 0.49
MSL3-213ENST00000476743 RIPK4P57078 832 aa18.11■□□□□ 0.49
MSL3-213ENST00000476743 FKBP8Q14318 412 aa18.11■□□□□ 0.49
MSL3-213ENST00000476743 C10orf71Q711Q0 1435 aa18.11■□□□□ 0.49
MSL3-213ENST00000476743 SCN7AQ01118 1682 aa18.11■□□□□ 0.49
MSL3-213ENST00000476743 SNRPA1P09661 255 aaKnown RBP18.1■□□□□ 0.49
MSL3-213ENST00000476743 IL6STP40189 918 aaPredicted RBP18.1■□□□□ 0.49
MSL3-213ENST00000476743 LMOD3Q0VAK6 560 aa18.1■□□□□ 0.49
MSL3-213ENST00000476743 USPL1Q5W0Q7 1092 aa18.1■□□□□ 0.49
MSL3-213ENST00000476743 THUMPD2Q9BTF0 503 aaKnown RBP18.1■□□□□ 0.49
MSL3-213ENST00000476743 USP16Q9Y5T5 823 aa18.1■□□□□ 0.49
MSL3-213ENST00000476743 ZPR1O75312 459 aa18.09■□□□□ 0.49
MSL3-213ENST00000476743 CANXP27824 592 aaKnown RBP18.09■□□□□ 0.49
MSL3-213ENST00000476743 TM4SF1P30408 202 aa18.09■□□□□ 0.49
MSL3-213ENST00000476743 CCDC146Q8IYE0 955 aa18.09■□□□□ 0.49
MSL3-213ENST00000476743 CHD4Q14839 1912 aa18.08■□□□□ 0.49
MSL3-213ENST00000476743 A0A087WZG4 1122 aa18.08■□□□□ 0.48
MSL3-213ENST00000476743 PRAMEF22A3QJZ6 481 aa18.08■□□□□ 0.48
MSL3-213ENST00000476743 BCL2L12Q9HB09 334 aa18.08■□□□□ 0.48
MSL3-213ENST00000476743 BABAM1Q9NWV8 329 aa18.08■□□□□ 0.48
MSL3-213ENST00000476743 MIS18AQ9NYP9 233 aa18.08■□□□□ 0.48
MSL3-213ENST00000476743 BCORQ6W2J9 1755 aa18.08■□□□□ 0.48
MSL3-213ENST00000476743 NRXN2Q9P2S2 1712 aa18.08■□□□□ 0.48
MSL3-213ENST00000476743 A1BGP04217 495 aa18.07■□□□□ 0.48
MSL3-213ENST00000476743 EIF4A1P60842 406 aaKnown RBP18.07■□□□□ 0.48
MSL3-213ENST00000476743 DDR1Q08345 913 aa18.07■□□□□ 0.48
MSL3-213ENST00000476743 PARP3Q9Y6F1 533 aa18.07■□□□□ 0.48
MSL3-213ENST00000476743 TRIM35Q9UPQ4 493 aa18.06■□□□□ 0.48
MSL3-213ENST00000476743 AFDNP55196 1824 aaKnown RBP18.06■□□□□ 0.48
MSL3-213ENST00000476743 PXDNLA1KZ92 1463 aa18.06■□□□□ 0.48
MSL3-213ENST00000476743 POLRMTO00411 1230 aaKnown RBP18.05■□□□□ 0.48
MSL3-213ENST00000476743 GIGYF1O75420 1035 aaPredicted RBP18.05■□□□□ 0.48
MSL3-213ENST00000476743 GPR162Q16538 588 aa18.05■□□□□ 0.48
MSL3-213ENST00000476743 CCDC184Q52MB2 194 aa18.05■□□□□ 0.48
MSL3-213ENST00000476743 RRP7AQ9Y3A4 280 aaKnown RBP18.05■□□□□ 0.48
MSL3-213ENST00000476743 BRCA1P38398 1863 aaKnown RBP18.05■□□□□ 0.48
MSL3-213ENST00000476743 YBX3P16989 372 aaKnown RBP eCLIP18.04■□□□□ 0.48
MSL3-213ENST00000476743 TGFB2P61812 414 aa18.04■□□□□ 0.48
MSL3-213ENST00000476743 NFIXQ14938 502 aa18.04■□□□□ 0.48
MSL3-213ENST00000476743 N4BP2Q86UW6 1770 aaPredicted RBP18.04■□□□□ 0.48
MSL3-213ENST00000476743 NBPF26B4DH59 902 aa18.03■□□□□ 0.48
MSL3-213ENST00000476743 NBPF10Q6P3W6 841 aaKnown RBP18.03■□□□□ 0.48
MSL3-213ENST00000476743 NBPF15Q8N660 670 aa18.03■□□□□ 0.48
MSL3-213ENST00000476743 ANP32CO43423 234 aa18.02■□□□□ 0.48
MSL3-213ENST00000476743 CAMTA2O94983 1202 aa18.02■□□□□ 0.48
MSL3-213ENST00000476743 TSPYL4Q9UJ04 414 aa18.02■□□□□ 0.48
MSL3-213ENST00000476743 RGL2O15211 777 aa18.01■□□□□ 0.47
MSL3-213ENST00000476743 GRIN3BO60391 1043 aa18.01■□□□□ 0.47
MSL3-213ENST00000476743 NEUROD2Q15784 382 aa18.01■□□□□ 0.47
MSL3-213ENST00000476743 TBC1D2BQ9UPU7 963 aa18.01■□□□□ 0.47
MSL3-213ENST00000476743 CHL1O00533 1208 aa18■□□□□ 0.47
MSL3-213ENST00000476743 YY1P25490 414 aa18■□□□□ 0.47
MSL3-213ENST00000476743 PIP4K2AP48426 406 aaPredicted RBP18■□□□□ 0.47
MSL3-213ENST00000476743 DZIP3Q86Y13 1208 aaKnown RBP18■□□□□ 0.47
MSL3-213ENST00000476743 NPM2Q86SE8 214 aaKnown RBP17.99■□□□□ 0.47
MSL3-213ENST00000476743 PELP1Q8IZL8 1130 aaKnown RBP17.99■□□□□ 0.47
MSL3-213ENST00000476743 ZNF330Q9Y3S2 320 aaPredicted RBP17.99■□□□□ 0.47
MSL3-213ENST00000476743 ERBB4Q15303 1308 aa17.98■□□□□ 0.47
MSL3-213ENST00000476743 APAF1O14727 1248 aa17.98■□□□□ 0.47
MSL3-213ENST00000476743 SERPINB2P05120 415 aa17.98■□□□□ 0.47
MSL3-213ENST00000476743 KCNA3P22001 575 aa17.98■□□□□ 0.47
MSL3-213ENST00000476743 TBC1D9BQ66K14 1250 aa17.98■□□□□ 0.47
MSL3-213ENST00000476743 CLEC4GQ6UXB4 293 aa17.98■□□□□ 0.47
MSL3-213ENST00000476743 DLEC1Q9Y238 1755 aa17.98■□□□□ 0.47
MSL3-213ENST00000476743 ARFGEF1Q9Y6D6 1849 aa17.96■□□□□ 0.47
MSL3-213ENST00000476743 CARMIL3Q8ND23 1372 aa17.96■□□□□ 0.47
MSL3-213ENST00000476743 A0A0G2JLW4 131 aa17.96■□□□□ 0.47
MSL3-213ENST00000476743 DPEP1P16444 411 aa17.96■□□□□ 0.47
MSL3-213ENST00000476743 ANKRD31Q8N7Z5 1873 aa17.96■□□□□ 0.47
MSL3-213ENST00000476743 ZNF853P0CG23 659 aa17.95■□□□□ 0.46
MSL3-213ENST00000476743 CFAP44Q96MT7 982 aa17.95■□□□□ 0.46
MSL3-213ENST00000476743 MRS2Q9HD23 443 aa17.95■□□□□ 0.46
MSL3-213ENST00000476743 NUP98P52948 1817 aa17.94■□□□□ 0.46
MSL3-213ENST00000476743 NCBP3Q53F19 620 aaKnown RBP17.94■□□□□ 0.46
MSL3-213ENST00000476743 BICDL1Q6ZP65 573 aa17.94■□□□□ 0.46
MSL3-213ENST00000476743 LRP10Q7Z4F1 713 aa17.94■□□□□ 0.46
MSL3-213ENST00000476743 PDIA6Q15084 440 aa17.93■□□□□ 0.46
MSL3-213ENST00000476743 ZNF652Q9Y2D9 606 aa17.93■□□□□ 0.46
MSL3-213ENST00000476743 ERVV-1B6SEH8 477 aa17.92■□□□□ 0.46
MSL3-213ENST00000476743 CALD1Q05682 793 aaKnown RBP17.92■□□□□ 0.46
MSL3-213ENST00000476743 CCDC27Q2M243 656 aa17.92■□□□□ 0.46
MSL3-213ENST00000476743 SETDB2Q96T68 719 aa17.92■□□□□ 0.46
MSL3-213ENST00000476743 IFT57Q9NWB7 429 aa17.92■□□□□ 0.46
MSL3-213ENST00000476743 HOXB7P09629 217 aa17.91■□□□□ 0.46
MSL3-213ENST00000476743 PRR5LQ6MZQ0 368 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms