RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 BEGAINQ9BUH8 593 aa9.26□□□□□ -0.93
CLDN4-205ENST00000476494 IQCA1LA6NCM1 817 aa9.25□□□□□ -0.93
CLDN4-205ENST00000476494 CA12O43570 354 aa9.25□□□□□ -0.93
CLDN4-205ENST00000476494 AOC2O75106 756 aa9.25□□□□□ -0.93
CLDN4-205ENST00000476494 RFC4P35249 363 aa9.25□□□□□ -0.93
CLDN4-205ENST00000476494 FMR1Q06787 632 aaKnown RBP eCLIP9.25□□□□□ -0.93
CLDN4-205ENST00000476494 CST9Q5W186 159 aa9.25□□□□□ -0.93
CLDN4-205ENST00000476494 MAP1SQ66K74 1059 aaPredicted RBP9.25□□□□□ -0.93
CLDN4-205ENST00000476494 USHBP1Q8N6Y0 703 aa9.25□□□□□ -0.93
CLDN4-205ENST00000476494 TTLL6Q8N841 843 aa9.25□□□□□ -0.93
CLDN4-205ENST00000476494 DDX21Q9NR30 783 aaKnown RBP eCLIP9.25□□□□□ -0.93
CLDN4-205ENST00000476494 SRP68Q9UHB9 627 aaKnown RBP9.25□□□□□ -0.93
CLDN4-205ENST00000476494 EVC2Q86UK5 1308 aa9.25□□□□□ -0.93
CLDN4-205ENST00000476494 CNTNAP4Q9C0A0 1308 aa9.25□□□□□ -0.93
CLDN4-205ENST00000476494 ECE1P42892 770 aa9.24□□□□□ -0.93
CLDN4-205ENST00000476494 ABT1Q9ULW3 272 aaKnown RBP9.24□□□□□ -0.93
CLDN4-205ENST00000476494 USP42Q9H9J4 1324 aaKnown RBP9.24□□□□□ -0.93
CLDN4-205ENST00000476494 LTBP3Q9NS15 1303 aa9.24□□□□□ -0.93
CLDN4-205ENST00000476494 COL6A3P12111 3177 aa9.24□□□□□ -0.93
CLDN4-205ENST00000476494 TRPM7Q96QT4 1865 aa9.23□□□□□ -0.93
CLDN4-205ENST00000476494 SMG6Q86US8 1419 aaKnown RBP9.23□□□□□ -0.93
CLDN4-205ENST00000476494 TATP17735 454 aaPredicted RBP9.23□□□□□ -0.93
CLDN4-205ENST00000476494 ZEB1P37275 1124 aaPredicted RBP9.23□□□□□ -0.93
CLDN4-205ENST00000476494 RAPGEF4Q8WZA2 1011 aa9.23□□□□□ -0.93
CLDN4-205ENST00000476494 ZNF219Q9P2Y4 722 aaPredicted RBP9.23□□□□□ -0.93
CLDN4-205ENST00000476494 INSRP06213 1382 aa9.23□□□□□ -0.93
CLDN4-205ENST00000476494 TLL2Q9Y6L7 1015 aa9.22□□□□□ -0.93
CLDN4-205ENST00000476494 CLSPNQ9HAW4 1339 aa9.22□□□□□ -0.93
CLDN4-205ENST00000476494 RAB3GAP2Q9H2M9 1393 aa9.22□□□□□ -0.93
CLDN4-205ENST00000476494 BRPF1P55201 1214 aaPredicted RBP9.21□□□□□ -0.94
CLDN4-205ENST00000476494 EAPPQ56P03 285 aaPredicted RBP9.21□□□□□ -0.94
CLDN4-205ENST00000476494 CCER1Q8TC90 406 aaPredicted RBP9.21□□□□□ -0.94
CLDN4-205ENST00000476494 EPHX2P34913 555 aa9.2□□□□□ -0.94
CLDN4-205ENST00000476494 NBPF15Q8N660 670 aa9.2□□□□□ -0.94
CLDN4-205ENST00000476494 ZIC5Q96T25 663 aa9.2□□□□□ -0.94
CLDN4-205ENST00000476494 ANKRD31Q8N7Z5 1873 aa9.19□□□□□ -0.94
CLDN4-205ENST00000476494 C21orf2O43822 256 aa9.19□□□□□ -0.94
CLDN4-205ENST00000476494 TMOD3Q9NYL9 352 aa9.19□□□□□ -0.94
CLDN4-205ENST00000476494 HACL1Q9UJ83 578 aa9.19□□□□□ -0.94
CLDN4-205ENST00000476494 CLEC11AQ9Y240 323 aa9.19□□□□□ -0.94
CLDN4-205ENST00000476494 EDC4Q6P2E9 1401 aaKnown RBP9.19□□□□□ -0.94
CLDN4-205ENST00000476494 SLX4Q8IY92 1834 aa9.19□□□□□ -0.94
CLDN4-205ENST00000476494 AMPHP49418 695 aa9.18□□□□□ -0.94
CLDN4-205ENST00000476494 GRM1Q13255 1194 aa9.18□□□□□ -0.94
CLDN4-205ENST00000476494 NFIXQ14938 502 aa9.18□□□□□ -0.94
CLDN4-205ENST00000476494 NCAPD2Q15021 1401 aa9.18□□□□□ -0.94
CLDN4-205ENST00000476494 CIAPIN1Q6FI81 312 aa9.18□□□□□ -0.94
CLDN4-205ENST00000476494 SAPCD2Q86UD0 394 aa9.18□□□□□ -0.94
CLDN4-205ENST00000476494 PNMA8AQ86V59 439 aaPredicted RBP9.18□□□□□ -0.94
CLDN4-205ENST00000476494 C2CD5Q86YS7 1000 aa9.18□□□□□ -0.94
CLDN4-205ENST00000476494 CARMIL3Q8ND23 1372 aa9.18□□□□□ -0.94
CLDN4-205ENST00000476494 ZNF541Q9H0D2 1346 aa9.18□□□□□ -0.94
CLDN4-205ENST00000476494 TRIOBPQ9H2D6 2365 aa9.17□□□□□ -0.94
CLDN4-205ENST00000476494 CACNA1SQ13698 1873 aa9.17□□□□□ -0.94
CLDN4-205ENST00000476494 RTL1A6NKG5 1358 aa9.17□□□□□ -0.94
CLDN4-205ENST00000476494 PITPNM2Q9BZ72 1349 aa9.17□□□□□ -0.94
CLDN4-205ENST00000476494 HHIPL1Q96JK4 782 aa9.17□□□□□ -0.94
CLDN4-205ENST00000476494 TAOK3Q9H2K8 898 aa9.17□□□□□ -0.94
CLDN4-205ENST00000476494 H0YIN7 160 aa9.16□□□□□ -0.94
CLDN4-205ENST00000476494 TRAF5O00463 557 aa9.16□□□□□ -0.94
CLDN4-205ENST00000476494 SERPINB2P05120 415 aa9.16□□□□□ -0.94
CLDN4-205ENST00000476494 CRKLP46109 303 aaKnown RBP9.16□□□□□ -0.94
CLDN4-205ENST00000476494 INTS5Q6P9B9 1019 aaKnown RBP9.16□□□□□ -0.94
CLDN4-205ENST00000476494 PAXIP1Q6ZW49 1069 aaPredicted RBP9.16□□□□□ -0.94
CLDN4-205ENST00000476494 SLC17A8Q8NDX2 589 aa9.16□□□□□ -0.94
CLDN4-205ENST00000476494 SLC12A5Q9H2X9 1139 aa9.16□□□□□ -0.94
CLDN4-205ENST00000476494 BCL2L12Q9HB09 334 aa9.16□□□□□ -0.94
CLDN4-205ENST00000476494 HPS5Q9UPZ3 1129 aa9.16□□□□□ -0.94
CLDN4-205ENST00000476494 RNF123Q5XPI4 1314 aa9.15□□□□□ -0.94
CLDN4-205ENST00000476494 COL11A2P13942 1736 aaPredicted RBP9.15□□□□□ -0.94
CLDN4-205ENST00000476494 HSP90AB2PQ58FF8 381 aa9.15□□□□□ -0.94
CLDN4-205ENST00000476494 USPL1Q5W0Q7 1092 aa9.15□□□□□ -0.94
CLDN4-205ENST00000476494 C7orf43Q8WVR3 580 aa9.15□□□□□ -0.94
CLDN4-205ENST00000476494 A0A1W2PP64 1363 aa9.14□□□□□ -0.95
CLDN4-205ENST00000476494 FZD9O00144 591 aa9.14□□□□□ -0.95
CLDN4-205ENST00000476494 PHKG2P15735 406 aa9.14□□□□□ -0.95
CLDN4-205ENST00000476494 RRS1Q15050 365 aaKnown RBP9.14□□□□□ -0.95
CLDN4-205ENST00000476494 RBM42Q9BTD8 480 aaKnown RBP9.14□□□□□ -0.95
CLDN4-205ENST00000476494 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.14□□□□□ -0.95
CLDN4-205ENST00000476494 SAGE1Q9NXZ1 904 aa9.13□□□□□ -0.95
CLDN4-205ENST00000476494 TJP1Q07157 1748 aa9.13□□□□□ -0.95
CLDN4-205ENST00000476494 TONSLQ96HA7 1378 aa9.12□□□□□ -0.95
CLDN4-205ENST00000476494 BRCA2P51587 3418 aa9.12□□□□□ -0.95
CLDN4-205ENST00000476494 ARFGEF2Q9Y6D5 1785 aa9.12□□□□□ -0.95
CLDN4-205ENST00000476494 CTU1Q7Z7A3 348 aaKnown RBP9.12□□□□□ -0.95
CLDN4-205ENST00000476494 COLQQ9Y215 455 aaPredicted RBP9.12□□□□□ -0.95
CLDN4-205ENST00000476494 KIAA0100Q14667 2235 aaKnown RBP9.12□□□□□ -0.95
CLDN4-205ENST00000476494 RANBP2P49792 3224 aaKnown RBP9.11□□□□□ -0.95
CLDN4-205ENST00000476494 FAM155AB1AL88 458 aaPredicted RBP9.11□□□□□ -0.95
CLDN4-205ENST00000476494 ERVV-2B6SEH9 535 aa9.11□□□□□ -0.95
CLDN4-205ENST00000476494 NOGQ13253 232 aa9.11□□□□□ -0.95
CLDN4-205ENST00000476494 IFNL2Q8IZJ0 200 aa9.11□□□□□ -0.95
CLDN4-205ENST00000476494 GPC2Q8N158 579 aa9.11□□□□□ -0.95
CLDN4-205ENST00000476494 ZNF622Q969S3 477 aaKnown RBP eCLIP9.11□□□□□ -0.95
CLDN4-205ENST00000476494 COG3Q96JB2 828 aa9.11□□□□□ -0.95
CLDN4-205ENST00000476494 BRIP1Q9BX63 1249 aa9.11□□□□□ -0.95
CLDN4-205ENST00000476494 NARFQ9UHQ1 456 aa9.11□□□□□ -0.95
CLDN4-205ENST00000476494 SPG7Q9UQ90 795 aa9.11□□□□□ -0.95
CLDN4-205ENST00000476494 SCN11AQ9UI33 1791 aa9.11□□□□□ -0.95
CLDN4-205ENST00000476494 AKAP11Q9UKA4 1901 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms