RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 AGBL1Q96MI9 1066 aa6.48□□□□□ -1.37
VPS13D-207ENST00000476169 PKD2L1Q9P0L9 805 aa6.48□□□□□ -1.37
VPS13D-207ENST00000476169 STIM2Q9P246 746 aa6.48□□□□□ -1.37
VPS13D-207ENST00000476169 BRPF3Q9ULD4 1205 aa6.48□□□□□ -1.37
VPS13D-207ENST00000476169 ZNF232Q9UNY5 417 aa6.48□□□□□ -1.37
VPS13D-207ENST00000476169 IQSEC3Q9UPP2 1182 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-207ENST00000476169 HRH3Q9Y5N1 445 aa6.48□□□□□ -1.37
VPS13D-207ENST00000476169 TTC24A2A3L6 582 aaPredicted RBP6.47□□□□□ -1.37
VPS13D-207ENST00000476169 TNFRSF10BO14763 440 aa6.47□□□□□ -1.37
VPS13D-207ENST00000476169 WDR4P57081 412 aaKnown RBP6.47□□□□□ -1.37
VPS13D-207ENST00000476169 RELBQ01201 579 aa6.47□□□□□ -1.37
VPS13D-207ENST00000476169 CENPCQ03188 943 aa6.47□□□□□ -1.37
VPS13D-207ENST00000476169 ALKBH2Q6NS38 261 aa6.47□□□□□ -1.37
VPS13D-207ENST00000476169 Q6ZVU0 165 aa6.47□□□□□ -1.37
VPS13D-207ENST00000476169 KDF1Q8NAX2 398 aaPredicted RBP6.47□□□□□ -1.37
VPS13D-207ENST00000476169 ZFAND3Q9H8U3 227 aa6.47□□□□□ -1.37
VPS13D-207ENST00000476169 QTRT2Q9H974 415 aaKnown RBP6.47□□□□□ -1.37
VPS13D-207ENST00000476169 CABP1Q9NZU7 370 aa6.47□□□□□ -1.37
VPS13D-207ENST00000476169 KIAA1522Q9P206 1035 aaPredicted RBP6.47□□□□□ -1.37
VPS13D-207ENST00000476169 EML1O00423 815 aa6.46□□□□□ -1.38
VPS13D-207ENST00000476169 GTF2E1P29083 439 aaPredicted RBP6.46□□□□□ -1.38
VPS13D-207ENST00000476169 EIF1AXP47813 144 aaKnown RBP6.46□□□□□ -1.38
VPS13D-207ENST00000476169 TEAD4Q15561 434 aa6.46□□□□□ -1.38
VPS13D-207ENST00000476169 CYP4X1Q8N118 509 aa6.46□□□□□ -1.38
VPS13D-207ENST00000476169 ABTB2Q8N961 1025 aa6.46□□□□□ -1.38
VPS13D-207ENST00000476169 TMC1Q8TDI8 760 aa6.46□□□□□ -1.38
VPS13D-207ENST00000476169 MYO19Q96H55 970 aa6.46□□□□□ -1.38
VPS13D-207ENST00000476169 RBCK1Q9BYM8 510 aa6.46□□□□□ -1.38
VPS13D-207ENST00000476169 PRKD2Q9BZL6 878 aa6.46□□□□□ -1.38
VPS13D-207ENST00000476169 FHDC1Q9C0D6 1143 aaPredicted RBP6.46□□□□□ -1.38
VPS13D-207ENST00000476169 J3QL48 77 aa6.45□□□□□ -1.38
VPS13D-207ENST00000476169 NOS2P35228 1153 aa6.45□□□□□ -1.38
VPS13D-207ENST00000476169 HIRAP54198 1017 aaPredicted RBP6.45□□□□□ -1.38
VPS13D-207ENST00000476169 COL19A1Q14993 1142 aa6.45□□□□□ -1.38
VPS13D-207ENST00000476169 EAPPQ56P03 285 aaPredicted RBP6.45□□□□□ -1.38
VPS13D-207ENST00000476169 SH3PXD2AQ5TCZ1 1133 aa6.45□□□□□ -1.38
VPS13D-207ENST00000476169 TMEM214Q6NUQ4 689 aaKnown RBP6.45□□□□□ -1.38
VPS13D-207ENST00000476169 TMC7Q7Z402 723 aa6.45□□□□□ -1.38
VPS13D-207ENST00000476169 FBXO33Q7Z6M2 555 aa6.45□□□□□ -1.38
VPS13D-207ENST00000476169 ZDHHC1Q8WTX9 485 aa6.45□□□□□ -1.38
VPS13D-207ENST00000476169 L3MBTL2Q969R5 705 aa6.45□□□□□ -1.38
VPS13D-207ENST00000476169 ZSCAN10Q96SZ4 725 aaPredicted RBP6.45□□□□□ -1.38
VPS13D-207ENST00000476169 KLF16Q9BXK1 252 aaPredicted RBP6.45□□□□□ -1.38
VPS13D-207ENST00000476169 ZNF395Q9H8N7 513 aaPredicted RBP6.45□□□□□ -1.38
VPS13D-207ENST00000476169 HCN4Q9Y3Q4 1203 aa6.45□□□□□ -1.38
VPS13D-207ENST00000476169 A0A0G2JS52 829 aa6.44□□□□□ -1.38
VPS13D-207ENST00000476169 TIMP2P16035 220 aa6.44□□□□□ -1.38
VPS13D-207ENST00000476169 BRD2P25440 801 aaKnown RBP6.44□□□□□ -1.38
VPS13D-207ENST00000476169 MMRN1Q13201 1228 aa6.44□□□□□ -1.38
VPS13D-207ENST00000476169 POTEAQ6S8J7 498 aa6.44□□□□□ -1.38
VPS13D-207ENST00000476169 PPARGC1BQ86YN6 1023 aaKnown RBP6.44□□□□□ -1.38
VPS13D-207ENST00000476169 ALDH16A1Q8IZ83 802 aa6.44□□□□□ -1.38
VPS13D-207ENST00000476169 PUS7Q96PZ0 661 aaKnown RBP6.44□□□□□ -1.38
VPS13D-207ENST00000476169 CITED4Q96RK1 184 aa6.44□□□□□ -1.38
VPS13D-207ENST00000476169 NIFKQ9BYG3 293 aaKnown RBP6.44□□□□□ -1.38
VPS13D-207ENST00000476169 BCL11AQ9H165 835 aa6.44□□□□□ -1.38
VPS13D-207ENST00000476169 CCDC87Q9NVE4 849 aa6.44□□□□□ -1.38
VPS13D-207ENST00000476169 LRFN2Q9ULH4 789 aa6.44□□□□□ -1.38
VPS13D-207ENST00000476169 PARP3Q9Y6F1 533 aa6.44□□□□□ -1.38
VPS13D-207ENST00000476169 V9GY48 417 aaPredicted RBP6.44□□□□□ -1.38
VPS13D-207ENST00000476169 TNFRSF10AO00220 468 aa6.43□□□□□ -1.38
VPS13D-207ENST00000476169 FZD6O60353 706 aa6.43□□□□□ -1.38
VPS13D-207ENST00000476169 P4HBP07237 508 aaKnown RBP6.43□□□□□ -1.38
VPS13D-207ENST00000476169 TAGLNQ01995 201 aaKnown RBP6.43□□□□□ -1.38
VPS13D-207ENST00000476169 DGKZQ13574 1117 aa6.43□□□□□ -1.38
VPS13D-207ENST00000476169 RTN1Q16799 776 aa6.43□□□□□ -1.38
VPS13D-207ENST00000476169 ZNF295-AS1Q8N0V1 137 aa6.43□□□□□ -1.38
VPS13D-207ENST00000476169 PHACTR1Q9C0D0 580 aa6.43□□□□□ -1.38
VPS13D-207ENST00000476169 PLA2G2EQ9NZK7 142 aa6.43□□□□□ -1.38
VPS13D-207ENST00000476169 ZBTB39O15060 712 aa6.42□□□□□ -1.38
VPS13D-207ENST00000476169 GDF9O60383 454 aa6.42□□□□□ -1.38
VPS13D-207ENST00000476169 C11orf91Q3C1V1 193 aa6.42□□□□□ -1.38
VPS13D-207ENST00000476169 GNASQ5JWF2 1037 aa6.42□□□□□ -1.38
VPS13D-207ENST00000476169 SLC27A3Q5K4L6 730 aa6.42□□□□□ -1.38
VPS13D-207ENST00000476169 MEIOBQ8N635 442 aa6.42□□□□□ -1.38
VPS13D-207ENST00000476169 RHBDD1Q8TEB9 315 aa6.42□□□□□ -1.38
VPS13D-207ENST00000476169 TREHO43280 583 aa6.41□□□□□ -1.38
VPS13D-207ENST00000476169 SMPD1P17405 629 aa6.41□□□□□ -1.38
VPS13D-207ENST00000476169 PDE3BQ13370 1112 aa6.41□□□□□ -1.38
VPS13D-207ENST00000476169 FAM26DQ5JW98 314 aa6.41□□□□□ -1.38
VPS13D-207ENST00000476169 ATCAYQ86WG3 371 aa6.41□□□□□ -1.38
VPS13D-207ENST00000476169 IFT43Q96FT9 208 aa6.41□□□□□ -1.38
VPS13D-207ENST00000476169 DMRTB1Q96MA1 342 aa6.41□□□□□ -1.38
VPS13D-207ENST00000476169 TOR4AQ9NXH8 423 aa6.41□□□□□ -1.38
VPS13D-207ENST00000476169 KLK14Q9P0G3 267 aa6.41□□□□□ -1.38
VPS13D-207ENST00000476169 GPC1P35052 558 aa6.4□□□□□ -1.38
VPS13D-207ENST00000476169 PLA2G4AP47712 749 aa6.4□□□□□ -1.38
VPS13D-207ENST00000476169 PLCB3Q01970 1234 aa6.4□□□□□ -1.38
VPS13D-207ENST00000476169 FMR1Q06787 632 aaKnown RBP eCLIP6.4□□□□□ -1.38
VPS13D-207ENST00000476169 C1orf53Q5VUE5 145 aa6.4□□□□□ -1.38
VPS13D-207ENST00000476169 ETFBKMTQ8IXQ9 262 aa6.4□□□□□ -1.38
VPS13D-207ENST00000476169 TSEN34Q9BSV6 310 aaKnown RBP6.4□□□□□ -1.38
VPS13D-207ENST00000476169 GRIP2Q9C0E4 1043 aa6.4□□□□□ -1.38
VPS13D-207ENST00000476169 IGSF5Q9NSI5 407 aa6.4□□□□□ -1.38
VPS13D-207ENST00000476169 VAMP1P23763 118 aa6.39□□□□□ -1.39
VPS13D-207ENST00000476169 MZF1P28698 734 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-207ENST00000476169 TXLNAP40222 546 aa6.39□□□□□ -1.39
VPS13D-207ENST00000476169 ZAP70P43403 619 aa6.39□□□□□ -1.39
VPS13D-207ENST00000476169 MAPK8P45983 427 aa6.39□□□□□ -1.39
VPS13D-207ENST00000476169 DNM1Q05193 864 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms