RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 HMX1Q9NP08 348 aaPredicted RBP6.45□□□□□ -1.38
VPS13D-206ENST00000476045 GPSM3Q9Y4H4 160 aa6.45□□□□□ -1.38
VPS13D-206ENST00000476045 WASF2Q9Y6W5 498 aa6.45□□□□□ -1.38
VPS13D-206ENST00000476045 DIP2AQ14689 1571 aa6.44□□□□□ -1.38
VPS13D-206ENST00000476045 TIMP2P16035 220 aa6.44□□□□□ -1.38
VPS13D-206ENST00000476045 KANK4Q5T7N3 995 aaPredicted RBP6.44□□□□□ -1.38
VPS13D-206ENST00000476045 TRIM46Q7Z4K8 759 aa6.44□□□□□ -1.38
VPS13D-206ENST00000476045 KIFC2Q96AC6 838 aa6.44□□□□□ -1.38
VPS13D-206ENST00000476045 SENP2Q9HC62 589 aa6.44□□□□□ -1.38
VPS13D-206ENST00000476045 NKTRP30414 1462 aaKnown RBP6.44□□□□□ -1.38
VPS13D-206ENST00000476045 STRCP1A6NGW2 1772 aa6.44□□□□□ -1.38
VPS13D-206ENST00000476045 ROCK1Q13464 1354 aa6.44□□□□□ -1.38
VPS13D-206ENST00000476045 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.44□□□□□ -1.38
VPS13D-206ENST00000476045 MYO5BQ9ULV0 1848 aa6.43□□□□□ -1.38
VPS13D-206ENST00000476045 ANKRD50Q9ULJ7 1429 aa6.43□□□□□ -1.38
VPS13D-206ENST00000476045 SPHKAPQ2M3C7 1700 aa6.43□□□□□ -1.38
VPS13D-206ENST00000476045 NR3C2P08235 984 aa6.43□□□□□ -1.38
VPS13D-206ENST00000476045 ERFEQ4G0M1 354 aa6.43□□□□□ -1.38
VPS13D-206ENST00000476045 TMEM259Q4ZIN3 620 aa6.43□□□□□ -1.38
VPS13D-206ENST00000476045 ANKLE2Q86XL3 938 aa6.43□□□□□ -1.38
VPS13D-206ENST00000476045 PPARGC1BQ86YN6 1023 aaKnown RBP6.43□□□□□ -1.38
VPS13D-206ENST00000476045 TRIM34Q9BYJ4 488 aa6.43□□□□□ -1.38
VPS13D-206ENST00000476045 ZNF335Q9H4Z2 1342 aaPredicted RBP6.43□□□□□ -1.38
VPS13D-206ENST00000476045 XIRP1Q702N8 1843 aaKnown RBP6.43□□□□□ -1.38
VPS13D-206ENST00000476045 E9PCH4 1651 aa6.42□□□□□ -1.38
VPS13D-206ENST00000476045 NOS1P29475 1434 aa6.42□□□□□ -1.38
VPS13D-206ENST00000476045 CAPN5O15484 640 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-206ENST00000476045 NR6A1Q15406 480 aa6.42□□□□□ -1.38
VPS13D-206ENST00000476045 GJD4Q96KN9 370 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-206ENST00000476045 TMEM131LA2VDJ0 1609 aa6.41□□□□□ -1.38
VPS13D-206ENST00000476045 AP1G2O75843 785 aa6.41□□□□□ -1.38
VPS13D-206ENST00000476045 CDV3Q9UKY7 258 aaKnown RBP6.41□□□□□ -1.38
VPS13D-206ENST00000476045 TMEM2Q9UHN6 1383 aa6.41□□□□□ -1.38
VPS13D-206ENST00000476045 LRRC7Q96NW7 1537 aa6.4□□□□□ -1.38
VPS13D-206ENST00000476045 MED1Q15648 1581 aaPredicted RBP6.4□□□□□ -1.38
VPS13D-206ENST00000476045 C11orf95C9JLR9 678 aaPredicted RBP6.4□□□□□ -1.38
VPS13D-206ENST00000476045 GPR37L1O60883 481 aa6.4□□□□□ -1.38
VPS13D-206ENST00000476045 SNRPBP14678 240 aaKnown RBP6.4□□□□□ -1.38
VPS13D-206ENST00000476045 BANK1Q8NDB2 785 aa6.4□□□□□ -1.38
VPS13D-206ENST00000476045 EPS8L1Q8TE68 723 aa6.4□□□□□ -1.38
VPS13D-206ENST00000476045 ALKQ9UM73 1620 aa6.39□□□□□ -1.39
VPS13D-206ENST00000476045 CHD2O14647 1828 aaKnown RBP6.39□□□□□ -1.39
VPS13D-206ENST00000476045 BMP1P13497 986 aa6.39□□□□□ -1.39
VPS13D-206ENST00000476045 WDR4P57081 412 aaKnown RBP6.39□□□□□ -1.39
VPS13D-206ENST00000476045 AGERQ15109 404 aa6.39□□□□□ -1.39
VPS13D-206ENST00000476045 MEIOBQ8N635 442 aa6.39□□□□□ -1.39
VPS13D-206ENST00000476045 IL27Q8NEV9 243 aa6.39□□□□□ -1.39
VPS13D-206ENST00000476045 ARHGAP9Q9BRR9 750 aa6.39□□□□□ -1.39
VPS13D-206ENST00000476045 UBAP1LF5GYI3 381 aa6.38□□□□□ -1.39
VPS13D-206ENST00000476045 TOM1O60784 492 aa6.38□□□□□ -1.39
VPS13D-206ENST00000476045 FSHRP23945 695 aa6.38□□□□□ -1.39
VPS13D-206ENST00000476045 PTK2Q05397 1052 aa6.38□□□□□ -1.39
VPS13D-206ENST00000476045 NFX1Q12986 1120 aaKnown RBP6.38□□□□□ -1.39
VPS13D-206ENST00000476045 MRPL14Q6P1L8 145 aaKnown RBP6.38□□□□□ -1.39
VPS13D-206ENST00000476045 PNMA1Q8ND90 353 aa6.38□□□□□ -1.39
VPS13D-206ENST00000476045 ITPKCQ96DU7 683 aa6.38□□□□□ -1.39
VPS13D-206ENST00000476045 SLC52A1Q9NWF4 448 aa6.38□□□□□ -1.39
VPS13D-206ENST00000476045 EID1Q9Y6B2 187 aa6.38□□□□□ -1.39
VPS13D-206ENST00000476045 DISP3Q9P2K9 1392 aa6.38□□□□□ -1.39
VPS13D-206ENST00000476045 ZFYVE9O95405 1425 aa6.38□□□□□ -1.39
VPS13D-206ENST00000476045 KIF1BO60333 1816 aa6.38□□□□□ -1.39
VPS13D-206ENST00000476045 TRPM2O94759 1503 aa6.37□□□□□ -1.39
VPS13D-206ENST00000476045 MAGEB6P1A0A0J9YX57 407 aa6.37□□□□□ -1.39
VPS13D-206ENST00000476045 TREML4Q6UXN2 200 aa6.37□□□□□ -1.39
VPS13D-206ENST00000476045 VASH1Q7L8A9 365 aaPredicted RBP6.37□□□□□ -1.39
VPS13D-206ENST00000476045 RRP7BPQ9NSQ0 103 aa6.37□□□□□ -1.39
VPS13D-206ENST00000476045 RRBP1Q9P2E9 1410 aaKnown RBP6.36□□□□□ -1.39
VPS13D-206ENST00000476045 PLEKHG1Q9ULL1 1385 aa6.36□□□□□ -1.39
VPS13D-206ENST00000476045 ESPNB1AK53 854 aa6.36□□□□□ -1.39
VPS13D-206ENST00000476045 ZIC2O95409 532 aaPredicted RBP6.36□□□□□ -1.39
VPS13D-206ENST00000476045 TRIM26Q12899 539 aaPredicted RBP6.36□□□□□ -1.39
VPS13D-206ENST00000476045 LCE2CQ5TA81 110 aa6.36□□□□□ -1.39
VPS13D-206ENST00000476045 CCDC116Q8IYX3 515 aa6.36□□□□□ -1.39
VPS13D-206ENST00000476045 ADAM32Q8TC27 787 aa6.36□□□□□ -1.39
VPS13D-206ENST00000476045 SLC10A4Q96EP9 437 aa6.36□□□□□ -1.39
VPS13D-206ENST00000476045 CARD14Q9BXL6 1004 aa6.36□□□□□ -1.39
VPS13D-206ENST00000476045 ZFAND3Q9H8U3 227 aa6.36□□□□□ -1.39
VPS13D-206ENST00000476045 EMILIN1Q9Y6C2 1016 aa6.36□□□□□ -1.39
VPS13D-206ENST00000476045 XRN1Q8IZH2 1706 aaKnown RBP6.36□□□□□ -1.39
VPS13D-206ENST00000476045 ROBO1Q9Y6N7 1651 aa6.36□□□□□ -1.39
VPS13D-206ENST00000476045 SETBP1Q9Y6X0 1596 aa6.35□□□□□ -1.39
VPS13D-206ENST00000476045 NCOA3Q9Y6Q9 1424 aa6.35□□□□□ -1.39
VPS13D-206ENST00000476045 PIK3R4Q99570 1358 aa6.35□□□□□ -1.39
VPS13D-206ENST00000476045 FAM50AQ14320 339 aaKnown RBP6.35□□□□□ -1.39
VPS13D-206ENST00000476045 ARID5BQ14865 1188 aa6.35□□□□□ -1.39
VPS13D-206ENST00000476045 Q6ZVU0 165 aa6.35□□□□□ -1.39
VPS13D-206ENST00000476045 NPAS3Q8IXF0 933 aa6.35□□□□□ -1.39
VPS13D-206ENST00000476045 MTMR14Q8NCE2 650 aa6.35□□□□□ -1.39
VPS13D-206ENST00000476045 ZFP42Q96MM3 310 aa6.35□□□□□ -1.39
VPS13D-206ENST00000476045 RIMS2Q9UQ26 1411 aa6.34□□□□□ -1.39
VPS13D-206ENST00000476045 NBPF20Q3BBV1 942 aa6.34□□□□□ -1.39
VPS13D-206ENST00000476045 INTS6LQ5JSJ4 861 aaKnown RBP6.34□□□□□ -1.39
VPS13D-206ENST00000476045 KCTD15Q96SI1 283 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-206ENST00000476045 DCCP43146 1447 aa6.33□□□□□ -1.4
VPS13D-206ENST00000476045 SETD1AO15047 1707 aaKnown RBP6.33□□□□□ -1.4
VPS13D-206ENST00000476045 CLTCL1P53675 1640 aa6.33□□□□□ -1.4
VPS13D-206ENST00000476045 NRXN3Q9Y4C0 1643 aa6.33□□□□□ -1.4
VPS13D-206ENST00000476045 WIPF1O43516 503 aa6.33□□□□□ -1.4
VPS13D-206ENST00000476045 PPP1R26Q5T8A7 1209 aaPredicted RBP6.33□□□□□ -1.4
VPS13D-206ENST00000476045 ZBTB33Q86T24 672 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms