RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 LARP1Q6PKG0 1096 aaKnown RBP9.71□□□□□ -0.86
PRKD3-208ENST00000475912 TSEN2Q8NCE0 465 aaKnown RBP9.71□□□□□ -0.86
PRKD3-208ENST00000475912 ZDHHC1Q8WTX9 485 aa9.71□□□□□ -0.86
PRKD3-208ENST00000475912 TRERF1Q96PN7 1200 aa9.71□□□□□ -0.86
PRKD3-208ENST00000475912 UBAP2LQ14157 1087 aaKnown RBP9.7□□□□□ -0.86
PRKD3-208ENST00000475912 TSPAN10Q9H1Z9 355 aaPredicted RBP9.7□□□□□ -0.86
PRKD3-208ENST00000475912 CRISPLD1Q9H336 500 aa9.7□□□□□ -0.86
PRKD3-208ENST00000475912 VRTNQ9H8Y1 702 aa9.7□□□□□ -0.86
PRKD3-208ENST00000475912 USP17L15C9J2P7 530 aa9.69□□□□□ -0.86
PRKD3-208ENST00000475912 USP17L10C9JJH3 530 aa9.69□□□□□ -0.86
PRKD3-208ENST00000475912 USP17L13C9JLJ4 530 aa9.69□□□□□ -0.86
PRKD3-208ENST00000475912 USP17L12C9JPN9 530 aa9.69□□□□□ -0.86
PRKD3-208ENST00000475912 USP17L11C9JVI0 530 aa9.69□□□□□ -0.86
PRKD3-208ENST00000475912 USP17L21D6R901 530 aa9.69□□□□□ -0.86
PRKD3-208ENST00000475912 USP17L18D6R9N7 530 aa9.69□□□□□ -0.86
PRKD3-208ENST00000475912 USP17L22D6RA61 530 aa9.69□□□□□ -0.86
PRKD3-208ENST00000475912 USP17L17D6RBQ6 530 aa9.69□□□□□ -0.86
PRKD3-208ENST00000475912 USP17L19D6RCP7 530 aa9.69□□□□□ -0.86
PRKD3-208ENST00000475912 USP17L20D6RJB6 530 aa9.69□□□□□ -0.86
PRKD3-208ENST00000475912 M0R2N6 131 aa9.69□□□□□ -0.86
PRKD3-208ENST00000475912 ADAMTS2O95450 1211 aa9.69□□□□□ -0.86
PRKD3-208ENST00000475912 USP17L24Q0WX57 530 aa9.69□□□□□ -0.86
PRKD3-208ENST00000475912 PTK7Q13308 1070 aa9.69□□□□□ -0.86
PRKD3-208ENST00000475912 LBRQ14739 615 aaKnown RBP9.69□□□□□ -0.86
PRKD3-208ENST00000475912 EFHC2Q5JST6 749 aa9.69□□□□□ -0.86
PRKD3-208ENST00000475912 C1orf216Q8TAB5 229 aa9.69□□□□□ -0.86
PRKD3-208ENST00000475912 MBIPQ9NS73 344 aa9.69□□□□□ -0.86
PRKD3-208ENST00000475912 SLURP2P0DP57 97 aa9.68□□□□□ -0.86
PRKD3-208ENST00000475912 TATP17735 454 aaPredicted RBP9.68□□□□□ -0.86
PRKD3-208ENST00000475912 TXLNAP40222 546 aa9.68□□□□□ -0.86
PRKD3-208ENST00000475912 TEAD4Q15561 434 aa9.68□□□□□ -0.86
PRKD3-208ENST00000475912 WHAMMQ8TF30 809 aa9.68□□□□□ -0.86
PRKD3-208ENST00000475912 L3MBTL2Q969R5 705 aa9.68□□□□□ -0.86
PRKD3-208ENST00000475912 ZDHHC3Q9NYG2 299 aa9.68□□□□□ -0.86
PRKD3-208ENST00000475912 FAM196BA6NMK8 535 aa9.67□□□□□ -0.86
PRKD3-208ENST00000475912 RFX1P22670 979 aa9.67□□□□□ -0.86
PRKD3-208ENST00000475912 NOS2P35228 1153 aa9.67□□□□□ -0.86
PRKD3-208ENST00000475912 SEC13P55735 322 aa9.67□□□□□ -0.86
PRKD3-208ENST00000475912 SRSF11Q05519 484 aaKnown RBP9.67□□□□□ -0.86
PRKD3-208ENST00000475912 DPYDQ12882 1025 aa9.67□□□□□ -0.86
PRKD3-208ENST00000475912 CDCA8Q53HL2 280 aa9.67□□□□□ -0.86
PRKD3-208ENST00000475912 ARSJQ5FYB0 599 aaPredicted RBP9.67□□□□□ -0.86
PRKD3-208ENST00000475912 SH3PXD2AQ5TCZ1 1133 aa9.67□□□□□ -0.86
PRKD3-208ENST00000475912 ZNF385CQ66K41 422 aaPredicted RBP9.67□□□□□ -0.86
PRKD3-208ENST00000475912 ZNF232Q9UNY5 417 aa9.67□□□□□ -0.86
PRKD3-208ENST00000475912 IGF1RP08069 1367 aa9.66□□□□□ -0.86
PRKD3-208ENST00000475912 A0A1W2PNR3 127 aa9.66□□□□□ -0.86
PRKD3-208ENST00000475912 MX2P20592 715 aa9.66□□□□□ -0.86
PRKD3-208ENST00000475912 SERTM1A2A2V5 107 aa9.65□□□□□ -0.86
PRKD3-208ENST00000475912 LGR5O75473 907 aa9.65□□□□□ -0.86
PRKD3-208ENST00000475912 ANKMY2Q8IV38 441 aa9.65□□□□□ -0.86
PRKD3-208ENST00000475912 SVOPQ8N4V2 548 aa9.65□□□□□ -0.86
PRKD3-208ENST00000475912 ABHD17AQ96GS6 310 aa9.65□□□□□ -0.86
PRKD3-208ENST00000475912 ZIC5Q96T25 663 aa9.65□□□□□ -0.86
PRKD3-208ENST00000475912 CFHR5Q9BXR6 569 aa9.65□□□□□ -0.86
PRKD3-208ENST00000475912 ARID3CA6NKF2 412 aa9.64□□□□□ -0.87
PRKD3-208ENST00000475912 EML1O00423 815 aa9.64□□□□□ -0.87
PRKD3-208ENST00000475912 PSMA6P60900 246 aaKnown RBP9.64□□□□□ -0.87
PRKD3-208ENST00000475912 PHF24Q9UPV7 400 aa9.64□□□□□ -0.87
PRKD3-208ENST00000475912 C21orf2O43822 256 aa9.63□□□□□ -0.87
PRKD3-208ENST00000475912 BNIP3LO60238 219 aa9.63□□□□□ -0.87
PRKD3-208ENST00000475912 LYPD4Q6UWN0 246 aa9.63□□□□□ -0.87
PRKD3-208ENST00000475912 BICDL1Q6ZP65 573 aa9.63□□□□□ -0.87
PRKD3-208ENST00000475912 NLRP8Q86W28 1048 aa9.63□□□□□ -0.87
PRKD3-208ENST00000475912 ARXQ96QS3 562 aa9.63□□□□□ -0.87
PRKD3-208ENST00000475912 HINFPQ9BQA5 517 aa9.63□□□□□ -0.87
PRKD3-208ENST00000475912 ZCCHC2Q9C0B9 1178 aaKnown RBP9.63□□□□□ -0.87
PRKD3-208ENST00000475912 NDFIP2Q9NV92 336 aa9.63□□□□□ -0.87
PRKD3-208ENST00000475912 PPP1R12BO60237 982 aaPredicted RBP9.62□□□□□ -0.87
PRKD3-208ENST00000475912 FIGNL1Q6PIW4 674 aa9.62□□□□□ -0.87
PRKD3-208ENST00000475912 SCG3Q8WXD2 468 aaKnown RBP9.62□□□□□ -0.87
PRKD3-208ENST00000475912 ATXN7L1Q9ULK2 861 aaPredicted RBP9.62□□□□□ -0.87
PRKD3-208ENST00000475912 CHMP3Q9Y3E7 222 aa9.62□□□□□ -0.87
PRKD3-208ENST00000475912 ATXN7O15265 892 aaPredicted RBP9.61□□□□□ -0.87
PRKD3-208ENST00000475912 NSFL1CQ9UNZ2 370 aaKnown RBP9.61□□□□□ -0.87
PRKD3-208ENST00000475912 HCN4Q9Y3Q4 1203 aa9.61□□□□□ -0.87
PRKD3-208ENST00000475912 PCDHGC4Q9Y5F7 938 aa9.61□□□□□ -0.87
PRKD3-208ENST00000475912 GJA3Q9Y6H8 435 aa9.61□□□□□ -0.87
PRKD3-208ENST00000475912 ATAD2Q6PL18 1390 aa9.61□□□□□ -0.87
PRKD3-208ENST00000475912 DCDC2BA2VCK2 349 aa9.6□□□□□ -0.87
PRKD3-208ENST00000475912 CELA2BP08218 269 aaPredicted RBP9.6□□□□□ -0.87
PRKD3-208ENST00000475912 FGFR3P22607 806 aa9.6□□□□□ -0.87
PRKD3-208ENST00000475912 C14orf37Q86TY3 774 aa9.6□□□□□ -0.87
PRKD3-208ENST00000475912 CHMP7Q8WUX9 453 aaPredicted RBP9.6□□□□□ -0.87
PRKD3-208ENST00000475912 KLRG1Q96E93 195 aa9.6□□□□□ -0.87
PRKD3-208ENST00000475912 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.59□□□□□ -0.87
PRKD3-208ENST00000475912 HIRAP54198 1017 aaPredicted RBP9.59□□□□□ -0.87
PRKD3-208ENST00000475912 POTEAQ6S8J7 498 aa9.59□□□□□ -0.87
PRKD3-208ENST00000475912 GAS2L2Q8NHY3 880 aa9.59□□□□□ -0.87
PRKD3-208ENST00000475912 RHPN1Q8TCX5 695 aa9.59□□□□□ -0.87
PRKD3-208ENST00000475912 ACDQ96AP0 544 aa9.59□□□□□ -0.87
PRKD3-208ENST00000475912 CCDC97Q96F63 343 aaPredicted RBP9.59□□□□□ -0.87
PRKD3-208ENST00000475912 PHACTR1Q9C0D0 580 aa9.59□□□□□ -0.87
PRKD3-208ENST00000475912 NOVA2Q9UNW9 492 aaKnown RBP9.59□□□□□ -0.87
PRKD3-208ENST00000475912 CCDC180Q9P1Z9 1646 aa9.59□□□□□ -0.87
PRKD3-208ENST00000475912 KHNYNO15037 678 aaKnown RBP9.58□□□□□ -0.88
PRKD3-208ENST00000475912 MAP2K3P46734 347 aa9.58□□□□□ -0.88
PRKD3-208ENST00000475912 CTBSQ01459 385 aa9.58□□□□□ -0.88
PRKD3-208ENST00000475912 MAP3K10Q02779 954 aa9.58□□□□□ -0.88
PRKD3-208ENST00000475912 LRRC69Q6ZNQ3 347 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms