RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 UBR3Q6ZT12 1888 aa14.53□□□□□ -0.08
CALD1-217ENST00000475772 MAMSTRQ6ZN01 415 aa14.53□□□□□ -0.08
CALD1-217ENST00000475772 OTUD5Q96G74 571 aa14.53□□□□□ -0.08
CALD1-217ENST00000475772 EYA1Q99502 592 aa14.53□□□□□ -0.08
CALD1-217ENST00000475772 C4BP0C0L5 1744 aa14.52□□□□□ -0.08
CALD1-217ENST00000475772 NSD3Q9BZ95 1437 aa14.52□□□□□ -0.08
CALD1-217ENST00000475772 WASHC2AQ641Q2 1341 aa14.52□□□□□ -0.08
CALD1-217ENST00000475772 SENP3-EIF4A1A0A087X0R7 540 aa14.52□□□□□ -0.09
CALD1-217ENST00000475772 G3V3G9 751 aa14.52□□□□□ -0.09
CALD1-217ENST00000475772 CDCA8Q53HL2 280 aa14.52□□□□□ -0.09
CALD1-217ENST00000475772 FLAD1Q8NFF5 587 aa14.51□□□□□ -0.09
CALD1-217ENST00000475772 POLKQ9UBT6 870 aa14.51□□□□□ -0.09
CALD1-217ENST00000475772 ANKRD26Q9UPS8 1709 aa14.51□□□□□ -0.09
CALD1-217ENST00000475772 GRIN3BO60391 1043 aa14.5□□□□□ -0.09
CALD1-217ENST00000475772 SMARCC1Q92922 1105 aaPredicted RBP14.5□□□□□ -0.09
CALD1-217ENST00000475772 CD2APQ9Y5K6 639 aa14.5□□□□□ -0.09
CALD1-217ENST00000475772 PPM1GO15355 546 aaPredicted RBP14.49□□□□□ -0.09
CALD1-217ENST00000475772 TRIM26Q12899 539 aaPredicted RBP14.49□□□□□ -0.09
CALD1-217ENST00000475772 LINC00116Q8NCU8 138 aa14.49□□□□□ -0.09
CALD1-217ENST00000475772 SCUBE2Q9NQ36 999 aa14.49□□□□□ -0.09
CALD1-217ENST00000475772 ASAP1Q9ULH1 1129 aa14.49□□□□□ -0.09
CALD1-217ENST00000475772 LOC102724428A0A0B4J2F2 783 aa14.48□□□□□ -0.09
CALD1-217ENST00000475772 SIK1P57059 783 aa14.48□□□□□ -0.09
CALD1-217ENST00000475772 ITPK1Q13572 414 aa14.48□□□□□ -0.09
CALD1-217ENST00000475772 CEP350Q5VT06 3117 aa14.48□□□□□ -0.09
CALD1-217ENST00000475772 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.47□□□□□ -0.09
CALD1-217ENST00000475772 GIGYF1O75420 1035 aaPredicted RBP14.47□□□□□ -0.09
CALD1-217ENST00000475772 AK7Q96M32 723 aa14.47□□□□□ -0.09
CALD1-217ENST00000475772 SPG7Q9UQ90 795 aa14.47□□□□□ -0.09
CALD1-217ENST00000475772 PHF14O94880 888 aa14.46□□□□□ -0.09
CALD1-217ENST00000475772 PHKG2P15735 406 aa14.46□□□□□ -0.09
CALD1-217ENST00000475772 HMGB2P26583 209 aaKnown RBP14.46□□□□□ -0.09
CALD1-217ENST00000475772 EIF4A2Q14240 407 aaKnown RBP14.46□□□□□ -0.09
CALD1-217ENST00000475772 C3orf67Q6ZVT6 689 aa14.46□□□□□ -0.09
CALD1-217ENST00000475772 ATG3Q9NT62 314 aa14.46□□□□□ -0.09
CALD1-217ENST00000475772 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.46□□□□□ -0.09
CALD1-217ENST00000475772 PLCB2Q00722 1185 aa14.45□□□□□ -0.1
CALD1-217ENST00000475772 IFNL2Q8IZJ0 200 aa14.45□□□□□ -0.1
CALD1-217ENST00000475772 SLC4A9Q96Q91 983 aa14.45□□□□□ -0.1
CALD1-217ENST00000475772 SSFA2P28290 1259 aa14.44□□□□□ -0.1
CALD1-217ENST00000475772 TIMELESSQ9UNS1 1208 aa14.44□□□□□ -0.1
CALD1-217ENST00000475772 ATP10DQ9P241 1426 aa14.43□□□□□ -0.1
CALD1-217ENST00000475772 ATP6V1AP38606 617 aa14.43□□□□□ -0.1
CALD1-217ENST00000475772 TMOD3Q9NYL9 352 aa14.43□□□□□ -0.1
CALD1-217ENST00000475772 WWC3Q9ULE0 1092 aa14.43□□□□□ -0.1
CALD1-217ENST00000475772 MYH14Q7Z406 1995 aaKnown RBP14.43□□□□□ -0.1
CALD1-217ENST00000475772 IGSF1Q8N6C5 1336 aa14.42□□□□□ -0.1
CALD1-217ENST00000475772 TNNT2P45379 298 aaPredicted RBP14.42□□□□□ -0.1
CALD1-217ENST00000475772 TMEM92Q6UXU6 159 aa14.42□□□□□ -0.1
CALD1-217ENST00000475772 ADCY9O60503 1353 aa14.42□□□□□ -0.1
CALD1-217ENST00000475772 GNPATO15228 680 aa14.4□□□□□ -0.1
CALD1-217ENST00000475772 KIF13BQ9NQT8 1826 aa14.4□□□□□ -0.1
CALD1-217ENST00000475772 KIAA1551Q9HCM1 1747 aa14.4□□□□□ -0.1
CALD1-217ENST00000475772 KDRP35968 1356 aa14.39□□□□□ -0.11
CALD1-217ENST00000475772 POLR3GLQ9BT43 218 aa14.39□□□□□ -0.11
CALD1-217ENST00000475772 PANK3Q9H999 370 aa14.39□□□□□ -0.11
CALD1-217ENST00000475772 N4BP2Q86UW6 1770 aaPredicted RBP14.39□□□□□ -0.11
CALD1-217ENST00000475772 ERVV-2B6SEH9 535 aa14.38□□□□□ -0.11
CALD1-217ENST00000475772 SLAIN1Q8ND83 568 aa14.38□□□□□ -0.11
CALD1-217ENST00000475772 ZNF831Q5JPB2 1677 aa14.37□□□□□ -0.11
CALD1-217ENST00000475772 MMP10P09238 476 aa14.37□□□□□ -0.11
CALD1-217ENST00000475772 TRAPPC3LQ5T215 181 aa14.37□□□□□ -0.11
CALD1-217ENST00000475772 ARHGEF1Q92888 912 aaKnown RBP14.37□□□□□ -0.11
CALD1-217ENST00000475772 GPBP1L1Q9HC44 474 aaPredicted RBP14.37□□□□□ -0.11
CALD1-217ENST00000475772 COL5A3P25940 1745 aaPredicted RBP14.37□□□□□ -0.11
CALD1-217ENST00000475772 PLEKHG2Q9H7P9 1386 aa14.36□□□□□ -0.11
CALD1-217ENST00000475772 KDM6AO15550 1401 aaPredicted RBP14.36□□□□□ -0.11
CALD1-217ENST00000475772 HSPA5P11021 654 aaKnown RBP14.36□□□□□ -0.11
CALD1-217ENST00000475772 RC3H1Q5TC82 1133 aaKnown RBP14.36□□□□□ -0.11
CALD1-217ENST00000475772 ZNF526Q8TF50 670 aaPredicted RBP14.36□□□□□ -0.11
CALD1-217ENST00000475772 DCAF5Q96JK2 942 aa14.36□□□□□ -0.11
CALD1-217ENST00000475772 RTCBQ9Y3I0 505 aaKnown RBP14.36□□□□□ -0.11
CALD1-217ENST00000475772 KIF3CO14782 793 aa14.35□□□□□ -0.11
CALD1-217ENST00000475772 RPS6KA4O75676 772 aa14.35□□□□□ -0.11
CALD1-217ENST00000475772 GYS1P13807 737 aa14.35□□□□□ -0.11
CALD1-217ENST00000475772 PLEKHO1Q53GL0 409 aaPredicted RBP14.35□□□□□ -0.11
CALD1-217ENST00000475772 AEBP1Q8IUX7 1158 aa14.35□□□□□ -0.11
CALD1-217ENST00000475772 PXDNLA1KZ92 1463 aa14.35□□□□□ -0.11
CALD1-217ENST00000475772 A0A0G2JLW4 131 aa14.34□□□□□ -0.11
CALD1-217ENST00000475772 NLGN1Q8N2Q7 840 aa14.34□□□□□ -0.11
CALD1-217ENST00000475772 CNTNAP4Q9C0A0 1308 aa14.34□□□□□ -0.11
CALD1-217ENST00000475772 CLSPNQ9HAW4 1339 aa14.34□□□□□ -0.11
CALD1-217ENST00000475772 BRCA1P38398 1863 aaKnown RBP14.33□□□□□ -0.11
CALD1-217ENST00000475772 KCNA3P22001 575 aa14.33□□□□□ -0.12
CALD1-217ENST00000475772 TGFB2P61812 414 aa14.33□□□□□ -0.12
CALD1-217ENST00000475772 ZNF530Q6P9A1 599 aaPredicted RBP14.33□□□□□ -0.12
CALD1-217ENST00000475772 PCGF6Q9BYE7 350 aa14.33□□□□□ -0.12
CALD1-217ENST00000475772 CICQ96RK0 1608 aaPredicted RBP14.33□□□□□ -0.12
CALD1-217ENST00000475772 HSP90AB1P08238 724 aaKnown RBP14.32□□□□□ -0.12
CALD1-217ENST00000475772 CABP4P57796 275 aa14.32□□□□□ -0.12
CALD1-217ENST00000475772 EIF4G2P78344 907 aaKnown RBP eCLIP14.32□□□□□ -0.12
CALD1-217ENST00000475772 AMOTQ4VCS5 1084 aa14.32□□□□□ -0.12
CALD1-217ENST00000475772 NFATC2IPQ8NCF5 419 aa14.32□□□□□ -0.12
CALD1-217ENST00000475772 C4AP0C0L4 1744 aa14.32□□□□□ -0.12
CALD1-217ENST00000475772 DPEP1P16444 411 aa14.31□□□□□ -0.12
CALD1-217ENST00000475772 HSPA6P17066 643 aa14.31□□□□□ -0.12
CALD1-217ENST00000475772 IL13P35225 146 aa14.31□□□□□ -0.12
CALD1-217ENST00000475772 MTHFSP49914 203 aa14.31□□□□□ -0.12
CALD1-217ENST00000475772 C10orf71Q711Q0 1435 aa14.31□□□□□ -0.12
CALD1-217ENST00000475772 SCN11AQ9UI33 1791 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms