RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 ADAMTS12P58397 1594 aa13.49□□□□□ -0.25
U2AF1-209ENST00000475639 TTC37Q6PGP7 1564 aa13.49□□□□□ -0.25
U2AF1-209ENST00000475639 ZBTB7BO15156 539 aaPredicted RBP13.49□□□□□ -0.25
U2AF1-209ENST00000475639 KRT18P05783 430 aaKnown RBP13.49□□□□□ -0.25
U2AF1-209ENST00000475639 CHRM1P11229 460 aaPredicted RBP13.49□□□□□ -0.25
U2AF1-209ENST00000475639 PLEKHM2Q8IWE5 1019 aa13.49□□□□□ -0.25
U2AF1-209ENST00000475639 PDS5BQ9NTI5 1447 aa13.49□□□□□ -0.25
U2AF1-209ENST00000475639 ARHGEF5Q12774 1597 aa13.49□□□□□ -0.25
U2AF1-209ENST00000475639 ABCC11Q96J66 1382 aa13.49□□□□□ -0.25
U2AF1-209ENST00000475639 CCDC97Q96F63 343 aaPredicted RBP13.49□□□□□ -0.25
U2AF1-209ENST00000475639 TRERF1Q96PN7 1200 aa13.49□□□□□ -0.25
U2AF1-209ENST00000475639 CENPHQ9H3R5 247 aa13.49□□□□□ -0.25
U2AF1-209ENST00000475639 MTHFSP49914 203 aa13.49□□□□□ -0.25
U2AF1-209ENST00000475639 EVA1CP58658 441 aa13.49□□□□□ -0.25
U2AF1-209ENST00000475639 USP48Q86UV5 1035 aa13.49□□□□□ -0.25
U2AF1-209ENST00000475639 AEBP1Q8IUX7 1158 aa13.49□□□□□ -0.25
U2AF1-209ENST00000475639 SPC24Q8NBT2 197 aa13.49□□□□□ -0.25
U2AF1-209ENST00000475639 PPFIBP1Q86W92 1011 aa13.48□□□□□ -0.25
U2AF1-209ENST00000475639 COG3Q96JB2 828 aa13.48□□□□□ -0.25
U2AF1-209ENST00000475639 TMX3Q96JJ7 454 aa13.48□□□□□ -0.25
U2AF1-209ENST00000475639 TCHHQ07283 1943 aa13.48□□□□□ -0.25
U2AF1-209ENST00000475639 NUTM2FA1L443 756 aa13.48□□□□□ -0.25
U2AF1-209ENST00000475639 SMTNL1A8MU46 457 aa13.48□□□□□ -0.25
U2AF1-209ENST00000475639 EFCAB2Q5VUJ9 269 aa13.48□□□□□ -0.25
U2AF1-209ENST00000475639 ST7Q9NRC1 585 aa13.48□□□□□ -0.25
U2AF1-209ENST00000475639 IQGAP3Q86VI3 1631 aa13.48□□□□□ -0.25
U2AF1-209ENST00000475639 MEX3CQ5U5Q3 659 aaKnown RBP13.48□□□□□ -0.25
U2AF1-209ENST00000475639 FAM53CQ9NYF3 392 aa13.48□□□□□ -0.25
U2AF1-209ENST00000475639 NF2P35240 595 aa13.47□□□□□ -0.25
U2AF1-209ENST00000475639 NEUROD6Q96NK8 337 aa13.47□□□□□ -0.25
U2AF1-209ENST00000475639 MCM2P49736 904 aa13.47□□□□□ -0.25
U2AF1-209ENST00000475639 STIM1Q13586 685 aa13.47□□□□□ -0.25
U2AF1-209ENST00000475639 TTC22Q5TAA0 569 aa13.47□□□□□ -0.25
U2AF1-209ENST00000475639 C16orf45Q96MC5 204 aaPredicted RBP13.47□□□□□ -0.25
U2AF1-209ENST00000475639 FEZ2Q9UHY8 353 aaPredicted RBP13.47□□□□□ -0.25
U2AF1-209ENST00000475639 CD109Q6YHK3 1445 aa13.47□□□□□ -0.25
U2AF1-209ENST00000475639 KMT5BQ4FZB7 885 aa13.47□□□□□ -0.25
U2AF1-209ENST00000475639 CCDC183Q5T5S1 534 aa13.47□□□□□ -0.25
U2AF1-209ENST00000475639 STK38Q15208 465 aa13.46□□□□□ -0.25
U2AF1-209ENST00000475639 TARBP1Q13395 1621 aaKnown RBP13.46□□□□□ -0.25
U2AF1-209ENST00000475639 NSD3Q9BZ95 1437 aa13.46□□□□□ -0.25
U2AF1-209ENST00000475639 ZBTB9Q96C00 473 aa13.46□□□□□ -0.25
U2AF1-209ENST00000475639 TRIM35Q9UPQ4 493 aa13.46□□□□□ -0.25
U2AF1-209ENST00000475639 YEATS2Q9ULM3 1422 aa13.46□□□□□ -0.26
U2AF1-209ENST00000475639 ADGRL1O94910 1474 aa13.46□□□□□ -0.26
U2AF1-209ENST00000475639 SERPINC1P01008 464 aa13.46□□□□□ -0.26
U2AF1-209ENST00000475639 IQCEQ6IPM2 695 aa13.46□□□□□ -0.26
U2AF1-209ENST00000475639 GIMAP7Q8NHV1 300 aa13.46□□□□□ -0.26
U2AF1-209ENST00000475639 SECISBP2LQ93073 1101 aaKnown RBP13.45□□□□□ -0.26
U2AF1-209ENST00000475639 LRRFIP2Q9Y608 721 aaKnown RBP13.45□□□□□ -0.26
U2AF1-209ENST00000475639 GBP2P32456 591 aaPredicted RBP13.45□□□□□ -0.26
U2AF1-209ENST00000475639 DESP17661 470 aa13.45□□□□□ -0.26
U2AF1-209ENST00000475639 ZNF396Q96N95 335 aaPredicted RBP13.45□□□□□ -0.26
U2AF1-209ENST00000475639 SPHKAPQ2M3C7 1700 aa13.45□□□□□ -0.26
U2AF1-209ENST00000475639 MX1P20591 662 aa13.45□□□□□ -0.26
U2AF1-209ENST00000475639 PTGS1P23219 599 aa13.45□□□□□ -0.26
U2AF1-209ENST00000475639 RBM6P78332 1123 aaKnown RBP13.45□□□□□ -0.26
U2AF1-209ENST00000475639 FUCA2Q9BTY2 467 aa13.45□□□□□ -0.26
U2AF1-209ENST00000475639 DUOX2Q9NRD8 1548 aa13.44□□□□□ -0.26
U2AF1-209ENST00000475639 C16orf71Q8IYS4 520 aaPredicted RBP13.44□□□□□ -0.26
U2AF1-209ENST00000475639 GOLGA6L10A0A0M3HER8 536 aa13.44□□□□□ -0.26
U2AF1-209ENST00000475639 HNRNPH2P55795 449 aaKnown RBP13.44□□□□□ -0.26
U2AF1-209ENST00000475639 UHRF1BP1LA0JNW5 1464 aa13.44□□□□□ -0.26
U2AF1-209ENST00000475639 LRRCC1Q9C099 1032 aa13.44□□□□□ -0.26
U2AF1-209ENST00000475639 DACH1Q9UI36 760 aa13.44□□□□□ -0.26
U2AF1-209ENST00000475639 KIF3BO15066 747 aa13.43□□□□□ -0.26
U2AF1-209ENST00000475639 NEK4P51957 841 aa13.43□□□□□ -0.26
U2AF1-209ENST00000475639 CUL4AQ13619 759 aa13.43□□□□□ -0.26
U2AF1-209ENST00000475639 CCDC91Q7Z6B0 441 aa13.43□□□□□ -0.26
U2AF1-209ENST00000475639 TBC1D2BQ9UPU7 963 aa13.43□□□□□ -0.26
U2AF1-209ENST00000475639 TNNT1P13805 278 aa13.43□□□□□ -0.26
U2AF1-209ENST00000475639 CETN2P41208 172 aa13.43□□□□□ -0.26
U2AF1-209ENST00000475639 ZNF397Q8NF99 534 aaPredicted RBP13.43□□□□□ -0.26
U2AF1-209ENST00000475639 MTMR7Q9Y216 660 aa13.43□□□□□ -0.26
U2AF1-209ENST00000475639 CYP2C19P33261 490 aa13.43□□□□□ -0.26
U2AF1-209ENST00000475639 RAD51AP2Q09MP3 1159 aa13.43□□□□□ -0.26
U2AF1-209ENST00000475639 TRAK1Q9UPV9 953 aa13.43□□□□□ -0.26
U2AF1-209ENST00000475639 STAMBPO95630 424 aa13.42□□□□□ -0.26
U2AF1-209ENST00000475639 SDSP20132 328 aa13.42□□□□□ -0.26
U2AF1-209ENST00000475639 TMPOP42166 694 aaKnown RBP13.42□□□□□ -0.26
U2AF1-209ENST00000475639 LRMPQ12912 555 aa13.42□□□□□ -0.26
U2AF1-209ENST00000475639 IFT140Q96RY7 1462 aa13.42□□□□□ -0.26
U2AF1-209ENST00000475639 OTUD7AQ8TE49 926 aaPredicted RBP13.42□□□□□ -0.26
U2AF1-209ENST00000475639 ERCC6Q03468 1493 aa13.42□□□□□ -0.26
U2AF1-209ENST00000475639 CCDC192P0DO97 292 aa13.42□□□□□ -0.26
U2AF1-209ENST00000475639 DHX37Q8IY37 1157 aaKnown RBP13.42□□□□□ -0.26
U2AF1-209ENST00000475639 SLC26A8Q96RN1 970 aa13.42□□□□□ -0.26
U2AF1-209ENST00000475639 ALDH1L2Q3SY69 923 aa13.42□□□□□ -0.26
U2AF1-209ENST00000475639 GIMAP6Q6P9H5 292 aa13.42□□□□□ -0.26
U2AF1-209ENST00000475639 GBP3Q9H0R5 595 aa13.42□□□□□ -0.26
U2AF1-209ENST00000475639 FYB1O15117 783 aa13.41□□□□□ -0.26
U2AF1-209ENST00000475639 FIBPO43427 364 aa13.41□□□□□ -0.26
U2AF1-209ENST00000475639 NEBLO76041 1014 aa13.41□□□□□ -0.26
U2AF1-209ENST00000475639 FBXO38Q6PIJ6 1188 aa13.41□□□□□ -0.26
U2AF1-209ENST00000475639 UBXN4Q92575 508 aa13.41□□□□□ -0.26
U2AF1-209ENST00000475639 CCDC102AQ96A19 550 aa13.41□□□□□ -0.26
U2AF1-209ENST00000475639 PAXBP1Q9Y5B6 917 aa13.41□□□□□ -0.26
U2AF1-209ENST00000475639 FAM193AP78312 1265 aa13.41□□□□□ -0.26
U2AF1-209ENST00000475639 TMEM87AQ8NBN3 555 aa13.41□□□□□ -0.26
U2AF1-209ENST00000475639 PPM1EQ8WY54 764 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms