RNA–Protein interactions for RNA: ENST00000475534.5

RRP1-204, Transcript of ribosomal RNA processing 1, humanhuman

TSL 3

Gene RRP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-204ENST00000475534 NFE2L2Q16236 605 aa29.31■■■□□ 2.28
RRP1-204ENST00000475534 FKBP8Q14318 412 aa29.3■■■□□ 2.28
RRP1-204ENST00000475534 TAF7Q15545 349 aaPredicted RBP29.3■■■□□ 2.28
RRP1-204ENST00000475534 UBR2Q8IWV8 1755 aa29.29■■■□□ 2.28
RRP1-204ENST00000475534 COL15A1P39059 1388 aa29.29■■■□□ 2.28
RRP1-204ENST00000475534 GRIN3BO60391 1043 aa29.29■■■□□ 2.28
RRP1-204ENST00000475534 USPL1Q5W0Q7 1092 aa29.29■■■□□ 2.28
RRP1-204ENST00000475534 NPM2Q86SE8 214 aaKnown RBP29.29■■■□□ 2.28
RRP1-204ENST00000475534 ZNF330Q9Y3S2 320 aaPredicted RBP29.28■■■□□ 2.28
RRP1-204ENST00000475534 SIPA1L3O60292 1781 aaPredicted RBP29.28■■■□□ 2.28
RRP1-204ENST00000475534 WDR43Q15061 677 aaKnown RBP eCLIP29.27■■■□□ 2.28
RRP1-204ENST00000475534 NARFQ9UHQ1 456 aa29.27■■■□□ 2.28
RRP1-204ENST00000475534 C4AP0C0L4 1744 aa29.27■■■□□ 2.28
RRP1-204ENST00000475534 YBX3P16989 372 aaKnown RBP eCLIP29.26■■■□□ 2.27
RRP1-204ENST00000475534 PRKRIP1Q9H875 184 aaPredicted RBP29.26■■■□□ 2.27
RRP1-204ENST00000475534 A0A087WZG4 1122 aa29.25■■■□□ 2.27
RRP1-204ENST00000475534 SNRPA1P09661 255 aaKnown RBP29.24■■■□□ 2.27
RRP1-204ENST00000475534 PNISRQ8TF01 805 aaKnown RBP29.24■■■□□ 2.27
RRP1-204ENST00000475534 MIS18AQ9NYP9 233 aa29.24■■■□□ 2.27
RRP1-204ENST00000475534 WWC3Q9ULE0 1092 aa29.24■■■□□ 2.27
RRP1-204ENST00000475534 A1BGP04217 495 aa29.22■■■□□ 2.27
RRP1-204ENST00000475534 EIF5P55010 431 aaKnown RBP29.22■■■□□ 2.27
RRP1-204ENST00000475534 RIPK4P57078 832 aa29.21■■■□□ 2.27
RRP1-204ENST00000475534 TGFB2P61812 414 aa29.21■■■□□ 2.27
RRP1-204ENST00000475534 THUMPD2Q9BTF0 503 aaKnown RBP29.21■■■□□ 2.27
RRP1-204ENST00000475534 IL6STP40189 918 aaPredicted RBP29.2■■■□□ 2.26
RRP1-204ENST00000475534 DDR1Q08345 913 aa29.2■■■□□ 2.26
RRP1-204ENST00000475534 USP16Q9Y5T5 823 aa29.2■■■□□ 2.26
RRP1-204ENST00000475534 TM4SF1P30408 202 aa29.19■■■□□ 2.26
RRP1-204ENST00000475534 CCDC146Q8IYE0 955 aa29.19■■■□□ 2.26
RRP1-204ENST00000475534 A0A0G2JLW4 131 aa29.18■■■□□ 2.26
RRP1-204ENST00000475534 PRAMEF22A3QJZ6 481 aa29.18■■■□□ 2.26
RRP1-204ENST00000475534 C10orf71Q711Q0 1435 aa29.18■■■□□ 2.26
RRP1-204ENST00000475534 POLRMTO00411 1230 aaKnown RBP29.17■■■□□ 2.26
RRP1-204ENST00000475534 LMOD3Q0VAK6 560 aa29.17■■■□□ 2.26
RRP1-204ENST00000475534 TBC1D2BQ9UPU7 963 aa29.17■■■□□ 2.26
RRP1-204ENST00000475534 TMPOP42166 694 aaKnown RBP29.16■■■□□ 2.26
RRP1-204ENST00000475534 NFIXQ14938 502 aa29.16■■■□□ 2.26
RRP1-204ENST00000475534 ZNF316A6NFI3 1004 aaPredicted RBP29.15■■■□□ 2.26
RRP1-204ENST00000475534 NEUROD2Q15784 382 aa29.15■■■□□ 2.26
RRP1-204ENST00000475534 BICDL1Q6ZP65 573 aa29.15■■■□□ 2.26
RRP1-204ENST00000475534 BCL2L12Q9HB09 334 aa29.15■■■□□ 2.26
RRP1-204ENST00000475534 DPEP1P16444 411 aa29.14■■■□□ 2.26
RRP1-204ENST00000475534 PIP4K2AP48426 406 aaPredicted RBP29.14■■■□□ 2.26
RRP1-204ENST00000475534 RUNDC1Q96C34 613 aa29.14■■■□□ 2.26
RRP1-204ENST00000475534 ADAMTS8Q9UP79 889 aa29.14■■■□□ 2.26
RRP1-204ENST00000475534 RRP7AQ9Y3A4 280 aaKnown RBP29.14■■■□□ 2.26
RRP1-204ENST00000475534 PXDNLA1KZ92 1463 aa29.14■■■□□ 2.26
RRP1-204ENST00000475534 DLG5Q8TDM6 1919 aa29.12■■■□□ 2.25
RRP1-204ENST00000475534 BCS1LQ9Y276 419 aa29.12■■■□□ 2.25
RRP1-204ENST00000475534 SERPINB2P05120 415 aa29.11■■■□□ 2.25
RRP1-204ENST00000475534 DZIP3Q86Y13 1208 aaKnown RBP29.11■■■□□ 2.25
RRP1-204ENST00000475534 TSPYL4Q9UJ04 414 aa29.11■■■□□ 2.25
RRP1-204ENST00000475534 ZNF784Q8NCA9 323 aaPredicted RBP29.1■■■□□ 2.25
RRP1-204ENST00000475534 UTRNP46939 3433 aa29.1■■■□□ 2.25
RRP1-204ENST00000475534 EIF4A1P60842 406 aaKnown RBP29.09■■■□□ 2.25
RRP1-204ENST00000475534 CHD4Q14839 1912 aa29.08■■■□□ 2.25
RRP1-204ENST00000475534 GOLGB1Q14789 3259 aaKnown RBP29.08■■■□□ 2.25
RRP1-204ENST00000475534 TBC1D9BQ66K14 1250 aa29.08■■■□□ 2.25
RRP1-204ENST00000475534 GIGYF1O75420 1035 aaPredicted RBP29.07■■■□□ 2.24
RRP1-204ENST00000475534 KIF13BQ9NQT8 1826 aa29.07■■■□□ 2.24
RRP1-204ENST00000475534 PIM2Q9P1W9 311 aa29.07■■■□□ 2.24
RRP1-204ENST00000475534 CAMTA2O94983 1202 aa29.06■■■□□ 2.24
RRP1-204ENST00000475534 NPHP1O15259 732 aa29.05■■■□□ 2.24
RRP1-204ENST00000475534 CHRNA5P30532 468 aa29.05■■■□□ 2.24
RRP1-204ENST00000475534 SETDB2Q96T68 719 aa29.05■■■□□ 2.24
RRP1-204ENST00000475534 N4BP2Q86UW6 1770 aaPredicted RBP29.04■■■□□ 2.24
RRP1-204ENST00000475534 NBPF26B4DH59 902 aa29.04■■■□□ 2.24
RRP1-204ENST00000475534 NBPF10Q6P3W6 841 aaKnown RBP29.04■■■□□ 2.24
RRP1-204ENST00000475534 NBPF15Q8N660 670 aa29.04■■■□□ 2.24
RRP1-204ENST00000475534 ZNF652Q9Y2D9 606 aa29.04■■■□□ 2.24
RRP1-204ENST00000475534 KCNA3P22001 575 aa29.03■■■□□ 2.24
RRP1-204ENST00000475534 BABAM1Q9NWV8 329 aa29.03■■■□□ 2.24
RRP1-204ENST00000475534 DALRD3Q5D0E6 543 aaKnown RBP29.02■■■□□ 2.24
RRP1-204ENST00000475534 NGEFQ8N5V2 710 aa29.02■■■□□ 2.24
RRP1-204ENST00000475534 LAS1LQ9Y4W2 734 aaKnown RBP29.02■■■□□ 2.24
RRP1-204ENST00000475534 CARMIL3Q8ND23 1372 aa29.01■■■□□ 2.24
RRP1-204ENST00000475534 KDM3BQ7LBC6 1761 aa29.01■■■□□ 2.23
RRP1-204ENST00000475534 ARHGAP27Q6ZUM4 889 aa29.01■■■□□ 2.23
RRP1-204ENST00000475534 ANP32CO43423 234 aa29■■■□□ 2.23
RRP1-204ENST00000475534 KIAA1551Q9HCM1 1747 aa29■■■□□ 2.23
RRP1-204ENST00000475534 SCN7AQ01118 1682 aa28.99■■■□□ 2.23
RRP1-204ENST00000475534 CLEC4GQ6UXB4 293 aa28.99■■■□□ 2.23
RRP1-204ENST00000475534 TRIM35Q9UPQ4 493 aa28.99■■■□□ 2.23
RRP1-204ENST00000475534 MYL6BP14649 208 aa28.98■■■□□ 2.23
RRP1-204ENST00000475534 H0YIN7 160 aa28.97■■■□□ 2.23
RRP1-204ENST00000475534 C2CD5Q86YS7 1000 aa28.97■■■□□ 2.23
RRP1-204ENST00000475534 CNBD1Q8NA66 436 aa28.97■■■□□ 2.23
RRP1-204ENST00000475534 EIF2S2P20042 333 aaKnown RBP28.96■■■□□ 2.23
RRP1-204ENST00000475534 APAF1O14727 1248 aa28.95■■■□□ 2.22
RRP1-204ENST00000475534 ST5P78524 1137 aa28.95■■■□□ 2.22
RRP1-204ENST00000475534 PRR5LQ6MZQ0 368 aa28.95■■■□□ 2.22
RRP1-204ENST00000475534 KIF6Q6ZMV9 814 aa28.95■■■□□ 2.22
RRP1-204ENST00000475534 CCDC24Q8N4L8 307 aa28.95■■■□□ 2.22
RRP1-204ENST00000475534 LAMB4A4D0S4 1761 aa28.94■■■□□ 2.22
RRP1-204ENST00000475534 PDE6BP35913 854 aa28.94■■■□□ 2.22
RRP1-204ENST00000475534 NBPF5PQ86XG9 351 aaPredicted RBP28.94■■■□□ 2.22
RRP1-204ENST00000475534 BRIP1Q9BX63 1249 aa28.94■■■□□ 2.22
RRP1-204ENST00000475534 NIP7Q9Y221 180 aaKnown RBP eCLIP28.94■■■□□ 2.22
RRP1-204ENST00000475534 AFDNP55196 1824 aaKnown RBP28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms