RNA–Protein interactions for RNA: ENST00000475211.1

ERGIC3-213, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 514 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-213ENST00000475211 AK7Q96M32 723 aa17.82■□□□□ 0.44
ERGIC3-213ENST00000475211 ANO8Q9HCE9 1232 aaPredicted RBP17.82■□□□□ 0.44
ERGIC3-213ENST00000475211 ZNF827Q17R98 1081 aa17.81■□□□□ 0.44
ERGIC3-213ENST00000475211 DUSP27Q5VZP5 1158 aa17.81■□□□□ 0.44
ERGIC3-213ENST00000475211 CHMP4AQ9BY43 222 aa17.81■□□□□ 0.44
ERGIC3-213ENST00000475211 CCDC87Q9NVE4 849 aa17.81■□□□□ 0.44
ERGIC3-213ENST00000475211 ERBB4Q15303 1308 aa17.8■□□□□ 0.44
ERGIC3-213ENST00000475211 PRAMEF22A3QJZ6 481 aa17.8■□□□□ 0.44
ERGIC3-213ENST00000475211 SLC15A2Q16348 729 aa17.8■□□□□ 0.44
ERGIC3-213ENST00000475211 KRT24Q2M2I5 525 aa17.8■□□□□ 0.44
ERGIC3-213ENST00000475211 TRMT2AQ8IZ69 625 aaKnown RBP17.8■□□□□ 0.44
ERGIC3-213ENST00000475211 CDCA7LQ96GN5 454 aa17.8■□□□□ 0.44
ERGIC3-213ENST00000475211 USP16Q9Y5T5 823 aa17.8■□□□□ 0.44
ERGIC3-213ENST00000475211 C8orf58Q8NAV2 365 aa17.79■□□□□ 0.44
ERGIC3-213ENST00000475211 GNPATO15228 680 aa17.78■□□□□ 0.44
ERGIC3-213ENST00000475211 EXOSC9Q06265 439 aaKnown RBP17.78■□□□□ 0.44
ERGIC3-213ENST00000475211 TWISTNBQ3B726 338 aaPredicted RBP17.78■□□□□ 0.44
ERGIC3-213ENST00000475211 INTS5Q6P9B9 1019 aaKnown RBP17.78■□□□□ 0.44
ERGIC3-213ENST00000475211 TFCP2L1Q9NZI6 479 aa17.78■□□□□ 0.44
ERGIC3-213ENST00000475211 QSER1Q2KHR3 1735 aa17.78■□□□□ 0.44
ERGIC3-213ENST00000475211 RPS6KA4O75676 772 aa17.77■□□□□ 0.44
ERGIC3-213ENST00000475211 ADRA2BP18089 450 aa17.77■□□□□ 0.44
ERGIC3-213ENST00000475211 SSFA2P28290 1259 aa17.77■□□□□ 0.44
ERGIC3-213ENST00000475211 HDGFL1Q5TGJ6 251 aa17.77■□□□□ 0.44
ERGIC3-213ENST00000475211 FLAD1Q8NFF5 587 aa17.77■□□□□ 0.44
ERGIC3-213ENST00000475211 ZBTB1Q9Y2K1 713 aa17.77■□□□□ 0.44
ERGIC3-213ENST00000475211 RTCBQ9Y3I0 505 aaKnown RBP17.77■□□□□ 0.44
ERGIC3-213ENST00000475211 UBR3Q6ZT12 1888 aa17.76■□□□□ 0.43
ERGIC3-213ENST00000475211 IL6STP40189 918 aaPredicted RBP17.76■□□□□ 0.43
ERGIC3-213ENST00000475211 MYH14Q7Z406 1995 aaKnown RBP17.75■□□□□ 0.43
ERGIC3-213ENST00000475211 ELL2O00472 640 aaPredicted RBP17.75■□□□□ 0.43
ERGIC3-213ENST00000475211 A1BGP04217 495 aa17.75■□□□□ 0.43
ERGIC3-213ENST00000475211 EIF2S2P20042 333 aaKnown RBP17.75■□□□□ 0.43
ERGIC3-213ENST00000475211 TSPYL6Q8N831 410 aa17.75■□□□□ 0.43
ERGIC3-213ENST00000475211 YTHDC1Q96MU7 727 aaKnown RBP17.75■□□□□ 0.43
ERGIC3-213ENST00000475211 CT47B1P0C2W7 299 aaPredicted RBP17.74■□□□□ 0.43
ERGIC3-213ENST00000475211 CANXP27824 592 aaKnown RBP17.74■□□□□ 0.43
ERGIC3-213ENST00000475211 COL15A1P39059 1388 aa17.74■□□□□ 0.43
ERGIC3-213ENST00000475211 PNPLA7Q6ZV29 1317 aa17.73■□□□□ 0.43
ERGIC3-213ENST00000475211 TUBGCP6Q96RT7 1819 aa17.73■□□□□ 0.43
ERGIC3-213ENST00000475211 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.73■□□□□ 0.43
ERGIC3-213ENST00000475211 EIF5P55010 431 aaKnown RBP17.73■□□□□ 0.43
ERGIC3-213ENST00000475211 CCDC30Q5VVM6 783 aa17.73■□□□□ 0.43
ERGIC3-213ENST00000475211 NPM2Q86SE8 214 aaKnown RBP17.73■□□□□ 0.43
ERGIC3-213ENST00000475211 ZNF428Q96B54 188 aa17.73■□□□□ 0.43
ERGIC3-213ENST00000475211 DBF4Q9UBU7 674 aaPredicted RBP17.73■□□□□ 0.43
ERGIC3-213ENST00000475211 A0A087WZG4 1122 aa17.72■□□□□ 0.43
ERGIC3-213ENST00000475211 NBPF26B4DH59 902 aa17.72■□□□□ 0.43
ERGIC3-213ENST00000475211 VAMP4O75379 141 aa17.72■□□□□ 0.43
ERGIC3-213ENST00000475211 PHF14O94880 888 aa17.72■□□□□ 0.43
ERGIC3-213ENST00000475211 R3HDM1Q15032 1099 aaKnown RBP17.72■□□□□ 0.43
ERGIC3-213ENST00000475211 TRAPPC3LQ5T215 181 aa17.72■□□□□ 0.43
ERGIC3-213ENST00000475211 NBPF10Q6P3W6 841 aaKnown RBP17.72■□□□□ 0.43
ERGIC3-213ENST00000475211 NBPF15Q8N660 670 aa17.72■□□□□ 0.43
ERGIC3-213ENST00000475211 DDX21Q9NR30 783 aaKnown RBP eCLIP17.72■□□□□ 0.43
ERGIC3-213ENST00000475211 PDIA6Q15084 440 aa17.71■□□□□ 0.43
ERGIC3-213ENST00000475211 AMIGO3Q86WK7 504 aa17.71■□□□□ 0.43
ERGIC3-213ENST00000475211 NECTIN2Q92692 538 aa17.71■□□□□ 0.43
ERGIC3-213ENST00000475211 STK31Q9BXU1 1019 aa17.71■□□□□ 0.43
ERGIC3-213ENST00000475211 CHPF2Q9P2E5 772 aa17.7■□□□□ 0.42
ERGIC3-213ENST00000475211 MYL6BP14649 208 aa17.69■□□□□ 0.42
ERGIC3-213ENST00000475211 RFC4P35249 363 aa17.69■□□□□ 0.42
ERGIC3-213ENST00000475211 PIP4K2AP48426 406 aaPredicted RBP17.69■□□□□ 0.42
ERGIC3-213ENST00000475211 COL23A1Q86Y22 540 aaPredicted RBP17.69■□□□□ 0.42
ERGIC3-213ENST00000475211 ARHGEF1Q92888 912 aaKnown RBP17.69■□□□□ 0.42
ERGIC3-213ENST00000475211 HYPKQ9NX55 129 aa17.69■□□□□ 0.42
ERGIC3-213ENST00000475211 ZNF330Q9Y3S2 320 aaPredicted RBP17.69■□□□□ 0.42
ERGIC3-213ENST00000475211 C4AP0C0L4 1744 aa17.69■□□□□ 0.42
ERGIC3-213ENST00000475211 CASZ1Q86V15 1759 aa17.68■□□□□ 0.42
ERGIC3-213ENST00000475211 PSDA5PKW4 1024 aaPredicted RBP17.68■□□□□ 0.42
ERGIC3-213ENST00000475211 PROSER3Q2NL68 480 aa17.68■□□□□ 0.42
ERGIC3-213ENST00000475211 LRP10Q7Z4F1 713 aa17.68■□□□□ 0.42
ERGIC3-213ENST00000475211 SLC16A10Q8TF71 515 aa17.68■□□□□ 0.42
ERGIC3-213ENST00000475211 USP42Q9H9J4 1324 aaKnown RBP17.68■□□□□ 0.42
ERGIC3-213ENST00000475211 SCN7AQ01118 1682 aa17.67■□□□□ 0.42
ERGIC3-213ENST00000475211 RGL2O15211 777 aa17.66■□□□□ 0.42
ERGIC3-213ENST00000475211 MSH5O43196 834 aa17.66■□□□□ 0.42
ERGIC3-213ENST00000475211 ZPR1O75312 459 aa17.66■□□□□ 0.42
ERGIC3-213ENST00000475211 ALDH1L2Q3SY69 923 aa17.66■□□□□ 0.42
ERGIC3-213ENST00000475211 DZIP3Q86Y13 1208 aaKnown RBP17.66■□□□□ 0.42
ERGIC3-213ENST00000475211 NARFQ9UHQ1 456 aa17.66■□□□□ 0.42
ERGIC3-213ENST00000475211 ANXA1P04083 346 aa17.65■□□□□ 0.42
ERGIC3-213ENST00000475211 KIF6Q6ZMV9 814 aa17.65■□□□□ 0.42
ERGIC3-213ENST00000475211 SMIM5Q71RC9 77 aa17.65■□□□□ 0.42
ERGIC3-213ENST00000475211 SLC4A2P04920 1241 aa17.64■□□□□ 0.41
ERGIC3-213ENST00000475211 XAGE3Q8WTP9 111 aa17.64■□□□□ 0.41
ERGIC3-213ENST00000475211 TBC1D2BQ9UPU7 963 aa17.64■□□□□ 0.41
ERGIC3-213ENST00000475211 BCORQ6W2J9 1755 aa17.63■□□□□ 0.41
ERGIC3-213ENST00000475211 CAMTA2O94983 1202 aa17.63■□□□□ 0.41
ERGIC3-213ENST00000475211 COPS6Q7L5N1 327 aa17.63■□□□□ 0.41
ERGIC3-213ENST00000475211 PDGFDQ9GZP0 370 aaPredicted RBP17.63■□□□□ 0.41
ERGIC3-213ENST00000475211 MTFR1LQ9H019 292 aa17.63■□□□□ 0.41
ERGIC3-213ENST00000475211 ZNF652Q9Y2D9 606 aa17.63■□□□□ 0.41
ERGIC3-213ENST00000475211 MAP3K15Q6ZN16 1313 aa17.63■□□□□ 0.41
ERGIC3-213ENST00000475211 CACNA1FO60840 1977 aa17.62■□□□□ 0.41
ERGIC3-213ENST00000475211 ERVV-1B6SEH8 477 aa17.62■□□□□ 0.41
ERGIC3-213ENST00000475211 TCERG1O14776 1098 aaKnown RBP17.62■□□□□ 0.41
ERGIC3-213ENST00000475211 DDX58O95786 925 aaKnown RBP17.62■□□□□ 0.41
ERGIC3-213ENST00000475211 GYS1P13807 737 aa17.62■□□□□ 0.41
ERGIC3-213ENST00000475211 USPL1Q5W0Q7 1092 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms