RNA–Protein interactions for RNA: ENST00000475163.5

TSPAN1-206, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-206ENST00000475163 TJP1Q07157 1748 aa13.19□□□□□ -0.3
TSPAN1-206ENST00000475163 PRAMEF22A3QJZ6 481 aa13.19□□□□□ -0.3
TSPAN1-206ENST00000475163 ELL2O00472 640 aaPredicted RBP13.19□□□□□ -0.3
TSPAN1-206ENST00000475163 HOXB7P09629 217 aa13.19□□□□□ -0.3
TSPAN1-206ENST00000475163 C8orf58Q8NAV2 365 aa13.19□□□□□ -0.3
TSPAN1-206ENST00000475163 LINC00116Q8NCU8 138 aa13.19□□□□□ -0.3
TSPAN1-206ENST00000475163 USP16Q9Y5T5 823 aa13.19□□□□□ -0.3
TSPAN1-206ENST00000475163 C5P01031 1676 aa13.18□□□□□ -0.3
TSPAN1-206ENST00000475163 SOS1Q07889 1333 aaPredicted RBP13.18□□□□□ -0.3
TSPAN1-206ENST00000475163 CICQ96RK0 1608 aaPredicted RBP13.18□□□□□ -0.3
TSPAN1-206ENST00000475163 CYP19A1P11511 503 aaPredicted RBP13.18□□□□□ -0.3
TSPAN1-206ENST00000475163 EIF2S2P20042 333 aaKnown RBP13.18□□□□□ -0.3
TSPAN1-206ENST00000475163 TWISTNBQ3B726 338 aaPredicted RBP13.18□□□□□ -0.3
TSPAN1-206ENST00000475163 NBPF14Q5TI25 921 aa13.18□□□□□ -0.3
TSPAN1-206ENST00000475163 RC3H1Q5TC82 1133 aaKnown RBP13.17□□□□□ -0.3
TSPAN1-206ENST00000475163 TSPYL6Q8N831 410 aa13.17□□□□□ -0.3
TSPAN1-206ENST00000475163 AK7Q96M32 723 aa13.17□□□□□ -0.3
TSPAN1-206ENST00000475163 CHMP4AQ9BY43 222 aa13.17□□□□□ -0.3
TSPAN1-206ENST00000475163 STK32BQ9NY57 414 aa13.17□□□□□ -0.3
TSPAN1-206ENST00000475163 TAF1LQ8IZX4 1826 aa13.17□□□□□ -0.3
TSPAN1-206ENST00000475163 COL5A3P25940 1745 aaPredicted RBP13.16□□□□□ -0.3
TSPAN1-206ENST00000475163 CNTNAP4Q9C0A0 1308 aa13.16□□□□□ -0.3
TSPAN1-206ENST00000475163 CRKLP46109 303 aaKnown RBP13.16□□□□□ -0.3
TSPAN1-206ENST00000475163 R3HDM1Q15032 1099 aaKnown RBP13.16□□□□□ -0.3
TSPAN1-206ENST00000475163 HDGFL1Q5TGJ6 251 aa13.16□□□□□ -0.3
TSPAN1-206ENST00000475163 CCDC87Q9NVE4 849 aa13.16□□□□□ -0.3
TSPAN1-206ENST00000475163 LAMB4A4D0S4 1761 aa13.16□□□□□ -0.3
TSPAN1-206ENST00000475163 C4BP0C0L5 1744 aa13.16□□□□□ -0.3
TSPAN1-206ENST00000475163 VAMP4O75379 141 aa13.15□□□□□ -0.3
TSPAN1-206ENST00000475163 A1BGP04217 495 aa13.15□□□□□ -0.3
TSPAN1-206ENST00000475163 INTS5Q6P9B9 1019 aaKnown RBP13.15□□□□□ -0.3
TSPAN1-206ENST00000475163 NECTIN2Q92692 538 aa13.15□□□□□ -0.3
TSPAN1-206ENST00000475163 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
TSPAN1-206ENST00000475163 GNPATO15228 680 aa13.14□□□□□ -0.31
TSPAN1-206ENST00000475163 CANXP27824 592 aaKnown RBP13.14□□□□□ -0.31
TSPAN1-206ENST00000475163 SLC15A2Q16348 729 aa13.14□□□□□ -0.31
TSPAN1-206ENST00000475163 ZNF827Q17R98 1081 aa13.14□□□□□ -0.31
TSPAN1-206ENST00000475163 CCDC30Q5VVM6 783 aa13.14□□□□□ -0.31
TSPAN1-206ENST00000475163 ANO8Q9HCE9 1232 aaPredicted RBP13.14□□□□□ -0.31
TSPAN1-206ENST00000475163 TFCP2L1Q9NZI6 479 aa13.14□□□□□ -0.31
TSPAN1-206ENST00000475163 ZBTB1Q9Y2K1 713 aa13.14□□□□□ -0.31
TSPAN1-206ENST00000475163 RTCBQ9Y3I0 505 aaKnown RBP13.14□□□□□ -0.31
TSPAN1-206ENST00000475163 ERBB4Q15303 1308 aa13.13□□□□□ -0.31
TSPAN1-206ENST00000475163 RPS6KA4O75676 772 aa13.13□□□□□ -0.31
TSPAN1-206ENST00000475163 CT47B1P0C2W7 299 aaPredicted RBP13.13□□□□□ -0.31
TSPAN1-206ENST00000475163 NPM2Q86SE8 214 aaKnown RBP13.13□□□□□ -0.31
TSPAN1-206ENST00000475163 NBPF26B4DH59 902 aa13.12□□□□□ -0.31
TSPAN1-206ENST00000475163 IL6STP40189 918 aaPredicted RBP13.12□□□□□ -0.31
TSPAN1-206ENST00000475163 PIP4K2AP48426 406 aaPredicted RBP13.12□□□□□ -0.31
TSPAN1-206ENST00000475163 NBPF10Q6P3W6 841 aaKnown RBP13.12□□□□□ -0.31
TSPAN1-206ENST00000475163 NBPF15Q8N660 670 aa13.12□□□□□ -0.31
TSPAN1-206ENST00000475163 STK31Q9BXU1 1019 aa13.12□□□□□ -0.31
TSPAN1-206ENST00000475163 DBF4Q9UBU7 674 aaPredicted RBP13.12□□□□□ -0.31
TSPAN1-206ENST00000475163 ZNF330Q9Y3S2 320 aaPredicted RBP13.12□□□□□ -0.31
TSPAN1-206ENST00000475163 MYH14Q7Z406 1995 aaKnown RBP13.11□□□□□ -0.31
TSPAN1-206ENST00000475163 TCERG1O14776 1098 aaKnown RBP13.11□□□□□ -0.31
TSPAN1-206ENST00000475163 PHF14O94880 888 aa13.11□□□□□ -0.31
TSPAN1-206ENST00000475163 MYL6BP14649 208 aa13.11□□□□□ -0.31
TSPAN1-206ENST00000475163 SSFA2P28290 1259 aa13.11□□□□□ -0.31
TSPAN1-206ENST00000475163 HOXD11P31277 338 aaPredicted RBP13.11□□□□□ -0.31
TSPAN1-206ENST00000475163 TRAPPC3LQ5T215 181 aa13.11□□□□□ -0.31
TSPAN1-206ENST00000475163 FLAD1Q8NFF5 587 aa13.11□□□□□ -0.31
TSPAN1-206ENST00000475163 ZNF428Q96B54 188 aa13.11□□□□□ -0.31
TSPAN1-206ENST00000475163 DDX21Q9NR30 783 aaKnown RBP eCLIP13.11□□□□□ -0.31
TSPAN1-206ENST00000475163 CHPF2Q9P2E5 772 aa13.11□□□□□ -0.31
TSPAN1-206ENST00000475163 A0A087WZG4 1122 aa13.1□□□□□ -0.31
TSPAN1-206ENST00000475163 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.1□□□□□ -0.31
TSPAN1-206ENST00000475163 EIF5P55010 431 aaKnown RBP13.1□□□□□ -0.31
TSPAN1-206ENST00000475163 PDIA6Q15084 440 aa13.1□□□□□ -0.31
TSPAN1-206ENST00000475163 HYPKQ9NX55 129 aa13.1□□□□□ -0.31
TSPAN1-206ENST00000475163 ANXA1P04083 346 aa13.09□□□□□ -0.31
TSPAN1-206ENST00000475163 PROSER3Q2NL68 480 aa13.09□□□□□ -0.31
TSPAN1-206ENST00000475163 UBR3Q6ZT12 1888 aa13.09□□□□□ -0.31
TSPAN1-206ENST00000475163 SMIM5Q71RC9 77 aa13.09□□□□□ -0.31
TSPAN1-206ENST00000475163 ARXQ96QS3 562 aa13.09□□□□□ -0.31
TSPAN1-206ENST00000475163 PNPLA7Q6ZV29 1317 aa13.09□□□□□ -0.31
TSPAN1-206ENST00000475163 COL15A1P39059 1388 aa13.08□□□□□ -0.31
TSPAN1-206ENST00000475163 SLC4A2P04920 1241 aa13.08□□□□□ -0.32
TSPAN1-206ENST00000475163 RFC4P35249 363 aa13.08□□□□□ -0.32
TSPAN1-206ENST00000475163 ALDH1L2Q3SY69 923 aa13.08□□□□□ -0.32
TSPAN1-206ENST00000475163 AMIGO3Q86WK7 504 aa13.08□□□□□ -0.32
TSPAN1-206ENST00000475163 COL23A1Q86Y22 540 aaPredicted RBP13.08□□□□□ -0.32
TSPAN1-206ENST00000475163 ARHGEF1Q92888 912 aaKnown RBP13.08□□□□□ -0.32
TSPAN1-206ENST00000475163 AIMP1Q12904 312 aaKnown RBP13.07□□□□□ -0.32
TSPAN1-206ENST00000475163 COPS6Q7L5N1 327 aa13.07□□□□□ -0.32
TSPAN1-206ENST00000475163 LRP10Q7Z4F1 713 aa13.07□□□□□ -0.32
TSPAN1-206ENST00000475163 DZIP3Q86Y13 1208 aaKnown RBP13.07□□□□□ -0.32
TSPAN1-206ENST00000475163 SSH1Q8WYL5 1049 aa13.07□□□□□ -0.32
TSPAN1-206ENST00000475163 RNF216Q9NWF9 866 aaPredicted RBP13.07□□□□□ -0.32
TSPAN1-206ENST00000475163 QSER1Q2KHR3 1735 aa13.07□□□□□ -0.32
TSPAN1-206ENST00000475163 TUBGCP6Q96RT7 1819 aa13.06□□□□□ -0.32
TSPAN1-206ENST00000475163 ZPR1O75312 459 aa13.06□□□□□ -0.32
TSPAN1-206ENST00000475163 KIF6Q6ZMV9 814 aa13.06□□□□□ -0.32
TSPAN1-206ENST00000475163 XAGE3Q8WTP9 111 aa13.06□□□□□ -0.32
TSPAN1-206ENST00000475163 PHAXQ9H814 394 aaKnown RBP13.06□□□□□ -0.32
TSPAN1-206ENST00000475163 SMC4Q9NTJ3 1288 aa13.06□□□□□ -0.32
TSPAN1-206ENST00000475163 NARFQ9UHQ1 456 aa13.06□□□□□ -0.32
TSPAN1-206ENST00000475163 TBC1D2BQ9UPU7 963 aa13.06□□□□□ -0.32
TSPAN1-206ENST00000475163 RARSP54136 660 aaKnown RBP13.05□□□□□ -0.32
TSPAN1-206ENST00000475163 TTLL7Q6ZT98 887 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms