RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 PELP1Q8IZL8 1130 aaKnown RBP21.13■□□□□ 0.97
ITGB1-210ENST00000474568 ADAMTS8Q9UP79 889 aa21.13■□□□□ 0.97
ITGB1-210ENST00000474568 SOS1Q07889 1333 aaPredicted RBP21.12■□□□□ 0.97
ITGB1-210ENST00000474568 PRAMEF22A3QJZ6 481 aa21.12■□□□□ 0.97
ITGB1-210ENST00000474568 ZNF330Q9Y3S2 320 aaPredicted RBP21.12■□□□□ 0.97
ITGB1-210ENST00000474568 SIPA1L3O60292 1781 aaPredicted RBP21.12■□□□□ 0.97
ITGB1-210ENST00000474568 UBR2Q8IWV8 1755 aa21.11■□□□□ 0.97
ITGB1-210ENST00000474568 TMPOP42166 694 aaKnown RBP21.11■□□□□ 0.97
ITGB1-210ENST00000474568 CICQ96RK0 1608 aaPredicted RBP21.11■□□□□ 0.97
ITGB1-210ENST00000474568 USP42Q9H9J4 1324 aaKnown RBP21.1■□□□□ 0.97
ITGB1-210ENST00000474568 CCDC184Q52MB2 194 aa21.1■□□□□ 0.97
ITGB1-210ENST00000474568 NLGN1Q8N2Q7 840 aa21.1■□□□□ 0.97
ITGB1-210ENST00000474568 COL15A1P39059 1388 aa21.1■□□□□ 0.97
ITGB1-210ENST00000474568 A1BGP04217 495 aa21.09■□□□□ 0.97
ITGB1-210ENST00000474568 PIP4K2AP48426 406 aaPredicted RBP21.09■□□□□ 0.97
ITGB1-210ENST00000474568 FKBP8Q14318 412 aa21.09■□□□□ 0.97
ITGB1-210ENST00000474568 USPL1Q5W0Q7 1092 aa21.09■□□□□ 0.97
ITGB1-210ENST00000474568 RUNDC1Q96C34 613 aa21.09■□□□□ 0.97
ITGB1-210ENST00000474568 TEX13AQ9BXU3 409 aaPredicted RBP21.09■□□□□ 0.97
ITGB1-210ENST00000474568 USP16Q9Y5T5 823 aa21.09■□□□□ 0.97
ITGB1-210ENST00000474568 ZPR1O75312 459 aa21.08■□□□□ 0.97
ITGB1-210ENST00000474568 ANP32CO43423 234 aa21.07■□□□□ 0.96
ITGB1-210ENST00000474568 GPR162Q16538 588 aa21.07■□□□□ 0.96
ITGB1-210ENST00000474568 WWC3Q9ULE0 1092 aa21.07■□□□□ 0.96
ITGB1-210ENST00000474568 SNRPA1P09661 255 aaKnown RBP21.06■□□□□ 0.96
ITGB1-210ENST00000474568 PNISRQ8TF01 805 aaKnown RBP21.06■□□□□ 0.96
ITGB1-210ENST00000474568 CD2APQ9Y5K6 639 aa21.06■□□□□ 0.96
ITGB1-210ENST00000474568 C4AP0C0L4 1744 aa21.06■□□□□ 0.96
ITGB1-210ENST00000474568 DLG5Q8TDM6 1919 aa21.06■□□□□ 0.96
ITGB1-210ENST00000474568 PARP3Q9Y6F1 533 aa21.05■□□□□ 0.96
ITGB1-210ENST00000474568 EIF5P55010 431 aaKnown RBP21.04■□□□□ 0.96
ITGB1-210ENST00000474568 LMOD3Q0VAK6 560 aa21.04■□□□□ 0.96
ITGB1-210ENST00000474568 NARFQ9UHQ1 456 aa21.04■□□□□ 0.96
ITGB1-210ENST00000474568 DDR1Q08345 913 aa21.03■□□□□ 0.96
ITGB1-210ENST00000474568 TSPYL4Q9UJ04 414 aa21.03■□□□□ 0.96
ITGB1-210ENST00000474568 TBC1D2BQ9UPU7 963 aa21.03■□□□□ 0.96
ITGB1-210ENST00000474568 A0A087WZG4 1122 aa21.02■□□□□ 0.96
ITGB1-210ENST00000474568 SENP3-EIF4A1A0A087X0R7 540 aa21.02■□□□□ 0.96
ITGB1-210ENST00000474568 NPM2Q86SE8 214 aaKnown RBP21.02■□□□□ 0.96
ITGB1-210ENST00000474568 BCL2L12Q9HB09 334 aa21.02■□□□□ 0.96
ITGB1-210ENST00000474568 IL6STP40189 918 aaPredicted RBP21.01■□□□□ 0.95
ITGB1-210ENST00000474568 EIF4A1P60842 406 aaKnown RBP21.01■□□□□ 0.95
ITGB1-210ENST00000474568 TRIM35Q9UPQ4 493 aa21.01■□□□□ 0.95
ITGB1-210ENST00000474568 LAS1LQ9Y4W2 734 aaKnown RBP21.01■□□□□ 0.95
ITGB1-210ENST00000474568 BICDL1Q6ZP65 573 aa21■□□□□ 0.95
ITGB1-210ENST00000474568 MRS2Q9HD23 443 aa21■□□□□ 0.95
ITGB1-210ENST00000474568 APAF1O14727 1248 aa20.99■□□□□ 0.95
ITGB1-210ENST00000474568 YBX3P16989 372 aaKnown RBP eCLIP20.99■□□□□ 0.951e-17■■□□□ 12.4
ITGB1-210ENST00000474568 NFIXQ14938 502 aa20.99■□□□□ 0.95
ITGB1-210ENST00000474568 NBPF26B4DH59 902 aa20.98■□□□□ 0.95
ITGB1-210ENST00000474568 POLRMTO00411 1230 aaKnown RBP20.98■□□□□ 0.95
ITGB1-210ENST00000474568 GIGYF1O75420 1035 aaPredicted RBP20.98■□□□□ 0.95
ITGB1-210ENST00000474568 YY1P25490 414 aa20.98■□□□□ 0.95
ITGB1-210ENST00000474568 TM4SF1P30408 202 aa20.98■□□□□ 0.95
ITGB1-210ENST00000474568 NBPF10Q6P3W6 841 aaKnown RBP20.98■□□□□ 0.95
ITGB1-210ENST00000474568 NBPF15Q8N660 670 aa20.98■□□□□ 0.95
ITGB1-210ENST00000474568 DZIP3Q86Y13 1208 aaKnown RBP20.97■□□□□ 0.95
ITGB1-210ENST00000474568 NGEFQ8N5V2 710 aa20.97■□□□□ 0.95
ITGB1-210ENST00000474568 C10orf71Q711Q0 1435 aa20.96■□□□□ 0.95
ITGB1-210ENST00000474568 A0A0G2JLW4 131 aa20.96■□□□□ 0.95
ITGB1-210ENST00000474568 KDM3BQ7LBC6 1761 aa20.95■□□□□ 0.94
ITGB1-210ENST00000474568 CAMTA2O94983 1202 aa20.95■□□□□ 0.94
ITGB1-210ENST00000474568 TBC1D9BQ66K14 1250 aa20.95■□□□□ 0.94
ITGB1-210ENST00000474568 PXDNLA1KZ92 1463 aa20.94■□□□□ 0.94
ITGB1-210ENST00000474568 SERPINB2P05120 415 aa20.93■□□□□ 0.94
ITGB1-210ENST00000474568 MYL6BP14649 208 aa20.93■□□□□ 0.94
ITGB1-210ENST00000474568 DPEP1P16444 411 aa20.93■□□□□ 0.94
ITGB1-210ENST00000474568 EIF2S2P20042 333 aaKnown RBP20.93■□□□□ 0.94
ITGB1-210ENST00000474568 KRT24Q2M2I5 525 aa20.93■□□□□ 0.94
ITGB1-210ENST00000474568 UTRNP46939 3433 aa20.92■□□□□ 0.94
ITGB1-210ENST00000474568 TGFB2P61812 414 aa20.92■□□□□ 0.94
ITGB1-210ENST00000474568 NECTIN2Q92692 538 aa20.92■□□□□ 0.94
ITGB1-210ENST00000474568 CHL1O00533 1208 aa20.91■□□□□ 0.94
ITGB1-210ENST00000474568 CCDC24Q8N4L8 307 aa20.91■□□□□ 0.94
ITGB1-210ENST00000474568 BABAM1Q9NWV8 329 aa20.91■□□□□ 0.94
ITGB1-210ENST00000474568 CHRNA5P30532 468 aa20.9■□□□□ 0.94
ITGB1-210ENST00000474568 GRIN3BO60391 1043 aa20.89■□□□□ 0.93
ITGB1-210ENST00000474568 BCS1LQ9Y276 419 aa20.89■□□□□ 0.93
ITGB1-210ENST00000474568 GOLGB1Q14789 3259 aaKnown RBP20.89■□□□□ 0.93
ITGB1-210ENST00000474568 ANXA1P04083 346 aa20.88■□□□□ 0.93
ITGB1-210ENST00000474568 SCN7AQ01118 1682 aa20.88■□□□□ 0.93
ITGB1-210ENST00000474568 CARMIL3Q8ND23 1372 aa20.87■□□□□ 0.93
ITGB1-210ENST00000474568 HLFQ16534 295 aa20.87■□□□□ 0.93
ITGB1-210ENST00000474568 TTLL7Q6ZT98 887 aa20.87■□□□□ 0.93
ITGB1-210ENST00000474568 FAM9BQ8IZU0 186 aa20.87■□□□□ 0.93
ITGB1-210ENST00000474568 SETDB2Q96T68 719 aa20.87■□□□□ 0.93
ITGB1-210ENST00000474568 LAMB4A4D0S4 1761 aa20.87■□□□□ 0.93
ITGB1-210ENST00000474568 NPHP1O15259 732 aa20.86■□□□□ 0.93
ITGB1-210ENST00000474568 CFAP44Q96MT7 982 aa20.86■□□□□ 0.93
ITGB1-210ENST00000474568 MBIPQ9NS73 344 aa20.86■□□□□ 0.93
ITGB1-210ENST00000474568 ZNF652Q9Y2D9 606 aa20.86■□□□□ 0.93
ITGB1-210ENST00000474568 SALL2Q9Y467 1007 aaPredicted RBP20.86■□□□□ 0.93
ITGB1-210ENST00000474568 N4BP2Q86UW6 1770 aaPredicted RBP20.85■□□□□ 0.93
ITGB1-210ENST00000474568 FAM177BA6PVY3 158 aa20.85■□□□□ 0.93
ITGB1-210ENST00000474568 KCNA3P22001 575 aa20.85■□□□□ 0.93
ITGB1-210ENST00000474568 PROSER3Q2NL68 480 aa20.85■□□□□ 0.93
ITGB1-210ENST00000474568 ZBTB3Q9H5J0 574 aa20.85■□□□□ 0.93
ITGB1-210ENST00000474568 KIF13BQ9NQT8 1826 aa20.84■□□□□ 0.93
ITGB1-210ENST00000474568 PRR5LQ6MZQ0 368 aa20.84■□□□□ 0.93
ITGB1-210ENST00000474568 KIF6Q6ZMV9 814 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 366.5 ms