RNA–Protein interactions for RNA: ENST00000474336.5

PKNOX1-205, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-205ENST00000474336 RIMS2Q9UQ26 1411 aa10.67□□□□□ -0.7
PKNOX1-205ENST00000474336 PPFIA3O75145 1194 aa10.66□□□□□ -0.7
PKNOX1-205ENST00000474336 HAP1P54257 671 aaPredicted RBP10.66□□□□□ -0.7
PKNOX1-205ENST00000474336 NR5A1Q13285 461 aa10.66□□□□□ -0.7
PKNOX1-205ENST00000474336 ARID5BQ14865 1188 aa10.66□□□□□ -0.7
PKNOX1-205ENST00000474336 LYPD8Q6UX82 237 aa10.66□□□□□ -0.7
PKNOX1-205ENST00000474336 CARD11Q9BXL7 1154 aa10.66□□□□□ -0.7
PKNOX1-205ENST00000474336 ZFAND3Q9H8U3 227 aa10.66□□□□□ -0.7
PKNOX1-205ENST00000474336 SETD1AO15047 1707 aaKnown RBP10.66□□□□□ -0.7
PKNOX1-205ENST00000474336 NRXN1Q9ULB1 1477 aa10.66□□□□□ -0.7
PKNOX1-205ENST00000474336 PIK3C2GO75747 1445 aa10.66□□□□□ -0.7
PKNOX1-205ENST00000474336 SETBP1Q9Y6X0 1596 aa10.65□□□□□ -0.7
PKNOX1-205ENST00000474336 ADGRF5Q8IZF2 1346 aa10.65□□□□□ -0.7
PKNOX1-205ENST00000474336 C6orf118Q5T5N4 469 aa10.65□□□□□ -0.7
PKNOX1-205ENST00000474336 FOXJ1Q92949 421 aa10.65□□□□□ -0.7
PKNOX1-205ENST00000474336 ITPKCQ96DU7 683 aa10.65□□□□□ -0.7
PKNOX1-205ENST00000474336 HIRIP3Q9BW71 556 aaPredicted RBP10.65□□□□□ -0.7
PKNOX1-205ENST00000474336 QRICH2Q9H0J4 1663 aa10.65□□□□□ -0.7
PKNOX1-205ENST00000474336 USP47Q96K76 1375 aa10.65□□□□□ -0.71
PKNOX1-205ENST00000474336 ARHGEF28Q8N1W1 1705 aaKnown RBP10.64□□□□□ -0.71
PKNOX1-205ENST00000474336 EIF4G2P78344 907 aaKnown RBP eCLIP10.64□□□□□ -0.71
PKNOX1-205ENST00000474336 NRXN3Q9Y4C0 1643 aa10.64□□□□□ -0.71
PKNOX1-205ENST00000474336 UPP2O95045 317 aa10.63□□□□□ -0.71
PKNOX1-205ENST00000474336 GJA5P36382 358 aa10.63□□□□□ -0.71
PKNOX1-205ENST00000474336 BCANQ96GW7 911 aa10.63□□□□□ -0.71
PKNOX1-205ENST00000474336 ALKQ9UM73 1620 aa10.62□□□□□ -0.71
PKNOX1-205ENST00000474336 ZFYVE9O95405 1425 aa10.62□□□□□ -0.71
PKNOX1-205ENST00000474336 NR3C2P08235 984 aa10.62□□□□□ -0.71
PKNOX1-205ENST00000474336 HSPA5P11021 654 aaKnown RBP10.62□□□□□ -0.71
PKNOX1-205ENST00000474336 KCTD17Q8N5Z5 321 aa10.62□□□□□ -0.71
PKNOX1-205ENST00000474336 SLIT1O75093 1534 aa10.62□□□□□ -0.71
PKNOX1-205ENST00000474336 TMEM2Q9UHN6 1383 aa10.62□□□□□ -0.71
PKNOX1-205ENST00000474336 BMP2P12643 396 aa10.61□□□□□ -0.71
PKNOX1-205ENST00000474336 GRM5P41594 1212 aa10.61□□□□□ -0.71
PKNOX1-205ENST00000474336 GSK3AP49840 483 aa10.61□□□□□ -0.71
PKNOX1-205ENST00000474336 TTLL12Q14166 644 aaPredicted RBP10.61□□□□□ -0.71
PKNOX1-205ENST00000474336 NBPF1Q3BBV0 1214 aa10.61□□□□□ -0.71
PKNOX1-205ENST00000474336 CFAP70Q5T0N1 1121 aa10.61□□□□□ -0.71
PKNOX1-205ENST00000474336 GPRASP1Q5JY77 1395 aa10.61□□□□□ -0.71
PKNOX1-205ENST00000474336 ASXL1Q8IXJ9 1541 aa10.6□□□□□ -0.71
PKNOX1-205ENST00000474336 SPTLC1O15269 473 aa10.6□□□□□ -0.71
PKNOX1-205ENST00000474336 F12P00748 615 aaPredicted RBP10.6□□□□□ -0.71
PKNOX1-205ENST00000474336 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.6□□□□□ -0.71
PKNOX1-205ENST00000474336 KNDC1Q76NI1 1749 aa10.6□□□□□ -0.71
PKNOX1-205ENST00000474336 EIF3AQ14152 1382 aaKnown RBP10.6□□□□□ -0.71
PKNOX1-205ENST00000474336 SCAF11Q99590 1463 aaKnown RBP10.6□□□□□ -0.71
PKNOX1-205ENST00000474336 ADGRB1O14514 1584 aa10.6□□□□□ -0.71
PKNOX1-205ENST00000474336 AGERQ15109 404 aa10.59□□□□□ -0.71
PKNOX1-205ENST00000474336 DIXDC1Q155Q3 683 aa10.59□□□□□ -0.71
PKNOX1-205ENST00000474336 LINC00528Q8N1L1 170 aa10.59□□□□□ -0.71
PKNOX1-205ENST00000474336 BEGAINQ9BUH8 593 aa10.59□□□□□ -0.71
PKNOX1-205ENST00000474336 MAP10Q9P2G4 905 aa10.59□□□□□ -0.71
PKNOX1-205ENST00000474336 EID1Q9Y6B2 187 aa10.59□□□□□ -0.71
PKNOX1-205ENST00000474336 ARHGAP23Q9P227 1491 aa10.59□□□□□ -0.71
PKNOX1-205ENST00000474336 CFAP99D6REC4 459 aa10.58□□□□□ -0.72
PKNOX1-205ENST00000474336 RSBN1LQ6PCB5 846 aaPredicted RBP10.58□□□□□ -0.72
PKNOX1-205ENST00000474336 GIGYF2Q6Y7W6 1299 aaKnown RBP10.58□□□□□ -0.72
PKNOX1-205ENST00000474336 BPHLQ86WA6 291 aaPredicted RBP10.58□□□□□ -0.72
PKNOX1-205ENST00000474336 THEMISQ8N1K5 641 aaPredicted RBP10.58□□□□□ -0.72
PKNOX1-205ENST00000474336 TMEM151AQ8N4L1 468 aa10.58□□□□□ -0.72
PKNOX1-205ENST00000474336 MEIOBQ8N635 442 aa10.58□□□□□ -0.72
PKNOX1-205ENST00000474336 SOS2Q07890 1332 aaPredicted RBP10.58□□□□□ -0.72
PKNOX1-205ENST00000474336 DIP2AQ14689 1571 aa10.57□□□□□ -0.72
PKNOX1-205ENST00000474336 AMHR2Q16671 573 aa10.57□□□□□ -0.72
PKNOX1-205ENST00000474336 C4orf48Q5BLP8 95 aa10.57□□□□□ -0.72
PKNOX1-205ENST00000474336 TXNDC2Q86VQ3 553 aa10.57□□□□□ -0.72
PKNOX1-205ENST00000474336 POLR3GLQ9BT43 218 aa10.57□□□□□ -0.72
PKNOX1-205ENST00000474336 TBC1D2Q9BYX2 928 aa10.57□□□□□ -0.72
PKNOX1-205ENST00000474336 PCDHB15Q9Y5E8 787 aa10.57□□□□□ -0.72
PKNOX1-205ENST00000474336 TMEM132EQ6IEE7 984 aa10.56□□□□□ -0.72
PKNOX1-205ENST00000474336 ZBTB3Q9H5J0 574 aa10.56□□□□□ -0.72
PKNOX1-205ENST00000474336 C14orf93Q9H972 538 aaKnown RBP10.56□□□□□ -0.72
PKNOX1-205ENST00000474336 DNMT3LQ9UJW3 386 aa10.56□□□□□ -0.72
PKNOX1-205ENST00000474336 PLEKHG1Q9ULL1 1385 aa10.55□□□□□ -0.72
PKNOX1-205ENST00000474336 ST20-MTHFSA0A0A6YYL1 179 aa10.55□□□□□ -0.72
PKNOX1-205ENST00000474336 GDF11O95390 407 aa10.55□□□□□ -0.72
PKNOX1-205ENST00000474336 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.55□□□□□ -0.72
PKNOX1-205ENST00000474336 RASSF7Q02833 373 aa10.54□□□□□ -0.72
PKNOX1-205ENST00000474336 YTHDC2Q9H6S0 1430 aaKnown RBP10.54□□□□□ -0.72
PKNOX1-205ENST00000474336 STK26Q9P289 416 aa10.54□□□□□ -0.72
PKNOX1-205ENST00000474336 TRAK1Q9UPV9 953 aa10.54□□□□□ -0.72
PKNOX1-205ENST00000474336 RNF225M0QZC1 329 aaPredicted RBP10.53□□□□□ -0.72
PKNOX1-205ENST00000474336 LTKP29376 864 aa10.53□□□□□ -0.72
PKNOX1-205ENST00000474336 PRPF38BQ5VTL8 546 aaKnown RBP10.53□□□□□ -0.72
PKNOX1-205ENST00000474336 GPR161Q8N6U8 529 aaKnown RBP10.53□□□□□ -0.72
PKNOX1-205ENST00000474336 TSEN34Q9BSV6 310 aaKnown RBP10.53□□□□□ -0.72
PKNOX1-205ENST00000474336 CHD2O14647 1828 aaKnown RBP10.53□□□□□ -0.72
PKNOX1-205ENST00000474336 CPS1P31327 1500 aa10.53□□□□□ -0.72
PKNOX1-205ENST00000474336 KRT76Q01546 638 aa10.52□□□□□ -0.73
PKNOX1-205ENST00000474336 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.52□□□□□ -0.73
PKNOX1-205ENST00000474336 DIEXFQ68CQ4 756 aaKnown RBP10.52□□□□□ -0.73
PKNOX1-205ENST00000474336 BARGINQ6ZT62 677 aa10.52□□□□□ -0.73
PKNOX1-205ENST00000474336 ANKLE2Q86XL3 938 aa10.52□□□□□ -0.73
PKNOX1-205ENST00000474336 CNTNAP3BQ96NU0 1288 aa10.52□□□□□ -0.73
PKNOX1-205ENST00000474336 CNTNAP3Q9BZ76 1288 aa10.52□□□□□ -0.73
PKNOX1-205ENST00000474336 ADAMTS8Q9UP79 889 aa10.52□□□□□ -0.73
PKNOX1-205ENST00000474336 CCDC7Q96M83 1385 aa10.52□□□□□ -0.73
PKNOX1-205ENST00000474336 ADAMTS13Q76LX8 1427 aa10.51□□□□□ -0.73
PKNOX1-205ENST00000474336 MYOM1P52179 1685 aa10.51□□□□□ -0.73
PKNOX1-205ENST00000474336 LMTK3Q96Q04 1460 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms