RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 FKBP8Q14318 412 aa14.81□□□□□ -0.04
CKS1B-206ENST00000474215 TAF7Q15545 349 aaPredicted RBP14.81□□□□□ -0.04
CKS1B-206ENST00000474215 NFE2L2Q16236 605 aa14.81□□□□□ -0.04
CKS1B-206ENST00000474215 PARP3Q9Y6F1 533 aa14.81□□□□□ -0.04
CKS1B-206ENST00000474215 MAPK8IP3Q9UPT6 1336 aa14.81□□□□□ -0.04
CKS1B-206ENST00000474215 USPL1Q5W0Q7 1092 aa14.8□□□□□ -0.04
CKS1B-206ENST00000474215 PRKRIP1Q9H875 184 aaPredicted RBP14.8□□□□□ -0.04
CKS1B-206ENST00000474215 NARFQ9UHQ1 456 aa14.8□□□□□ -0.04
CKS1B-206ENST00000474215 SIPA1L3O60292 1781 aaPredicted RBP14.8□□□□□ -0.04
CKS1B-206ENST00000474215 UBR2Q8IWV8 1755 aa14.8□□□□□ -0.04
CKS1B-206ENST00000474215 GRIN3BO60391 1043 aa14.79□□□□□ -0.04
CKS1B-206ENST00000474215 YBX3P16989 372 aaKnown RBP eCLIP14.79□□□□□ -0.04
CKS1B-206ENST00000474215 EIF5P55010 431 aaKnown RBP14.79□□□□□ -0.04
CKS1B-206ENST00000474215 COL15A1P39059 1388 aa14.78□□□□□ -0.04
CKS1B-206ENST00000474215 SNRPA1P09661 255 aaKnown RBP14.78□□□□□ -0.04
CKS1B-206ENST00000474215 TM4SF1P30408 202 aa14.78□□□□□ -0.04
CKS1B-206ENST00000474215 PNISRQ8TF01 805 aaKnown RBP14.78□□□□□ -0.04
CKS1B-206ENST00000474215 A0A087WZG4 1122 aa14.77□□□□□ -0.05
CKS1B-206ENST00000474215 A1BGP04217 495 aa14.77□□□□□ -0.05
CKS1B-206ENST00000474215 TGFB2P61812 414 aa14.77□□□□□ -0.05
CKS1B-206ENST00000474215 MIS18AQ9NYP9 233 aa14.77□□□□□ -0.05
CKS1B-206ENST00000474215 USP16Q9Y5T5 823 aa14.77□□□□□ -0.05
CKS1B-206ENST00000474215 C4AP0C0L4 1744 aa14.76□□□□□ -0.05
CKS1B-206ENST00000474215 IL6STP40189 918 aaPredicted RBP14.76□□□□□ -0.05
CKS1B-206ENST00000474215 RIPK4P57078 832 aa14.76□□□□□ -0.05
CKS1B-206ENST00000474215 DDR1Q08345 913 aa14.76□□□□□ -0.05
CKS1B-206ENST00000474215 WDR43Q15061 677 aaKnown RBP eCLIP14.76□□□□□ -0.05
CKS1B-206ENST00000474215 THUMPD2Q9BTF0 503 aaKnown RBP14.76□□□□□ -0.05
CKS1B-206ENST00000474215 GOLGB1Q14789 3259 aaKnown RBP14.75□□□□□ -0.05
CKS1B-206ENST00000474215 A0A0G2JLW4 131 aa14.75□□□□□ -0.05
CKS1B-206ENST00000474215 PRAMEF22A3QJZ6 481 aa14.75□□□□□ -0.05
CKS1B-206ENST00000474215 POLRMTO00411 1230 aaKnown RBP14.75□□□□□ -0.05
CKS1B-206ENST00000474215 NPM2Q86SE8 214 aaKnown RBP14.75□□□□□ -0.05
CKS1B-206ENST00000474215 BCL2L12Q9HB09 334 aa14.75□□□□□ -0.05
CKS1B-206ENST00000474215 ADAMTS8Q9UP79 889 aa14.75□□□□□ -0.05
CKS1B-206ENST00000474215 TMPOP42166 694 aaKnown RBP14.74□□□□□ -0.05
CKS1B-206ENST00000474215 NFIXQ14938 502 aa14.74□□□□□ -0.05
CKS1B-206ENST00000474215 TBC1D2BQ9UPU7 963 aa14.74□□□□□ -0.05
CKS1B-206ENST00000474215 ZNF330Q9Y3S2 320 aaPredicted RBP14.74□□□□□ -0.05
CKS1B-206ENST00000474215 C10orf71Q711Q0 1435 aa14.74□□□□□ -0.05
CKS1B-206ENST00000474215 ZNF316A6NFI3 1004 aaPredicted RBP14.73□□□□□ -0.05
CKS1B-206ENST00000474215 CCDC146Q8IYE0 955 aa14.73□□□□□ -0.05
CKS1B-206ENST00000474215 RUNDC1Q96C34 613 aa14.73□□□□□ -0.05
CKS1B-206ENST00000474215 WWC3Q9ULE0 1092 aa14.73□□□□□ -0.05
CKS1B-206ENST00000474215 UTRNP46939 3433 aa14.73□□□□□ -0.05
CKS1B-206ENST00000474215 PXDNLA1KZ92 1463 aa14.72□□□□□ -0.05
CKS1B-206ENST00000474215 DPEP1P16444 411 aa14.72□□□□□ -0.05
CKS1B-206ENST00000474215 LMOD3Q0VAK6 560 aa14.72□□□□□ -0.05
CKS1B-206ENST00000474215 GIGYF1O75420 1035 aaPredicted RBP14.71□□□□□ -0.05
CKS1B-206ENST00000474215 SERPINB2P05120 415 aa14.71□□□□□ -0.05
CKS1B-206ENST00000474215 PIP4K2AP48426 406 aaPredicted RBP14.71□□□□□ -0.05
CKS1B-206ENST00000474215 EIF4A1P60842 406 aaKnown RBP14.71□□□□□ -0.05
CKS1B-206ENST00000474215 NEUROD2Q15784 382 aa14.71□□□□□ -0.05
CKS1B-206ENST00000474215 RRP7AQ9Y3A4 280 aaKnown RBP14.71□□□□□ -0.05
CKS1B-206ENST00000474215 DLG5Q8TDM6 1919 aa14.7□□□□□ -0.06
CKS1B-206ENST00000474215 NBPF26B4DH59 902 aa14.7□□□□□ -0.06
CKS1B-206ENST00000474215 KCNA3P22001 575 aa14.7□□□□□ -0.06
CKS1B-206ENST00000474215 NBPF10Q6P3W6 841 aaKnown RBP14.7□□□□□ -0.06
CKS1B-206ENST00000474215 BICDL1Q6ZP65 573 aa14.7□□□□□ -0.06
CKS1B-206ENST00000474215 DZIP3Q86Y13 1208 aaKnown RBP14.7□□□□□ -0.06
CKS1B-206ENST00000474215 NBPF15Q8N660 670 aa14.7□□□□□ -0.06
CKS1B-206ENST00000474215 ZNF784Q8NCA9 323 aaPredicted RBP14.7□□□□□ -0.06
CKS1B-206ENST00000474215 KIF13BQ9NQT8 1826 aa14.69□□□□□ -0.06
CKS1B-206ENST00000474215 CAMTA2O94983 1202 aa14.69□□□□□ -0.06
CKS1B-206ENST00000474215 TBC1D9BQ66K14 1250 aa14.69□□□□□ -0.06
CKS1B-206ENST00000474215 BABAM1Q9NWV8 329 aa14.69□□□□□ -0.06
CKS1B-206ENST00000474215 BCS1LQ9Y276 419 aa14.69□□□□□ -0.06
CKS1B-206ENST00000474215 PIM2Q9P1W9 311 aa14.68□□□□□ -0.06
CKS1B-206ENST00000474215 TSPYL4Q9UJ04 414 aa14.68□□□□□ -0.06
CKS1B-206ENST00000474215 TRIM35Q9UPQ4 493 aa14.68□□□□□ -0.06
CKS1B-206ENST00000474215 CHD4Q14839 1912 aa14.67□□□□□ -0.06
CKS1B-206ENST00000474215 CHRNA5P30532 468 aa14.67□□□□□ -0.06
CKS1B-206ENST00000474215 CLEC4GQ6UXB4 293 aa14.67□□□□□ -0.06
CKS1B-206ENST00000474215 SETDB2Q96T68 719 aa14.67□□□□□ -0.06
CKS1B-206ENST00000474215 KIAA1551Q9HCM1 1747 aa14.66□□□□□ -0.06
CKS1B-206ENST00000474215 N4BP2Q86UW6 1770 aaPredicted RBP14.65□□□□□ -0.06
CKS1B-206ENST00000474215 CHL1O00533 1208 aa14.65□□□□□ -0.06
CKS1B-206ENST00000474215 RGL2O15211 777 aa14.65□□□□□ -0.06
CKS1B-206ENST00000474215 DALRD3Q5D0E6 543 aaKnown RBP14.65□□□□□ -0.06
CKS1B-206ENST00000474215 ARHGAP27Q6ZUM4 889 aa14.65□□□□□ -0.06
CKS1B-206ENST00000474215 ZNF652Q9Y2D9 606 aa14.65□□□□□ -0.06
CKS1B-206ENST00000474215 KDM3BQ7LBC6 1761 aa14.65□□□□□ -0.06
CKS1B-206ENST00000474215 CARMIL3Q8ND23 1372 aa14.64□□□□□ -0.07
CKS1B-206ENST00000474215 CCDC184Q52MB2 194 aa14.64□□□□□ -0.07
CKS1B-206ENST00000474215 BRIP1Q9BX63 1249 aa14.64□□□□□ -0.07
CKS1B-206ENST00000474215 H0YIN7 160 aa14.63□□□□□ -0.07
CKS1B-206ENST00000474215 APAF1O14727 1248 aa14.63□□□□□ -0.07
CKS1B-206ENST00000474215 PRR5LQ6MZQ0 368 aa14.63□□□□□ -0.07
CKS1B-206ENST00000474215 NGEFQ8N5V2 710 aa14.63□□□□□ -0.07
CKS1B-206ENST00000474215 LAS1LQ9Y4W2 734 aaKnown RBP14.63□□□□□ -0.07
CKS1B-206ENST00000474215 NPHP1O15259 732 aa14.62□□□□□ -0.07
CKS1B-206ENST00000474215 ANP32CO43423 234 aa14.62□□□□□ -0.07
CKS1B-206ENST00000474215 MYL6BP14649 208 aa14.62□□□□□ -0.07
CKS1B-206ENST00000474215 PDE6BP35913 854 aa14.62□□□□□ -0.07
CKS1B-206ENST00000474215 C2CD5Q86YS7 1000 aa14.62□□□□□ -0.07
CKS1B-206ENST00000474215 CNBD1Q8NA66 436 aa14.62□□□□□ -0.07
CKS1B-206ENST00000474215 NRXN2Q9P2S2 1712 aa14.62□□□□□ -0.07
CKS1B-206ENST00000474215 PDZRN3Q9UPQ7 1066 aa14.62□□□□□ -0.07
CKS1B-206ENST00000474215 ERBB4Q15303 1308 aa14.62□□□□□ -0.07
CKS1B-206ENST00000474215 SCN7AQ01118 1682 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms