RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 SWI5Q1ZZU3 235 aa7.14□□□□□ -1.27
BRCA1-212ENST00000473961 SH3BP5LQ7L8J4 393 aa7.14□□□□□ -1.27
BRCA1-212ENST00000473961 SLC10A4Q96EP9 437 aa7.14□□□□□ -1.27
BRCA1-212ENST00000473961 ZMIZ1Q9ULJ6 1067 aa7.14□□□□□ -1.27
BRCA1-212ENST00000473961 DOLKQ9UPQ8 538 aa7.14□□□□□ -1.27
BRCA1-212ENST00000473961 MAGEB6P1A0A0J9YX57 407 aa7.13□□□□□ -1.27
BRCA1-212ENST00000473961 ARID4AP29374 1257 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-212ENST00000473961 PTK7Q13308 1070 aa7.13□□□□□ -1.27
BRCA1-212ENST00000473961 ANKMY2Q8IV38 441 aa7.13□□□□□ -1.27
BRCA1-212ENST00000473961 TRIM22Q8IYM9 498 aa7.13□□□□□ -1.27
BRCA1-212ENST00000473961 STK32AQ8WU08 396 aa7.13□□□□□ -1.27
BRCA1-212ENST00000473961 CARD14Q9BXL6 1004 aa7.13□□□□□ -1.27
BRCA1-212ENST00000473961 GOLGA2P5Q9HBQ8 144 aa7.13□□□□□ -1.27
BRCA1-212ENST00000473961 CARNS1A5YM72 827 aa7.12□□□□□ -1.27
BRCA1-212ENST00000473961 SHISA8B8ZZ34 492 aa7.12□□□□□ -1.27
BRCA1-212ENST00000473961 CRTC2Q53ET0 693 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-212ENST00000473961 CD163Q86VB7 1156 aa7.12□□□□□ -1.27
BRCA1-212ENST00000473961 PHTF2Q8N3S3 785 aa7.12□□□□□ -1.27
BRCA1-212ENST00000473961 LARGE2Q8N3Y3 721 aa7.12□□□□□ -1.27
BRCA1-212ENST00000473961 OGFOD1Q8N543 542 aa7.12□□□□□ -1.27
BRCA1-212ENST00000473961 CLP1Q92989 425 aaKnown RBP7.12□□□□□ -1.27
BRCA1-212ENST00000473961 GMCL1Q96IK5 515 aa7.12□□□□□ -1.27
BRCA1-212ENST00000473961 ZNF395Q9H8N7 513 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-212ENST00000473961 DNAAF2Q9NVR5 837 aaKnown RBP7.12□□□□□ -1.27
BRCA1-212ENST00000473961 CHIC2Q9UKJ5 165 aa7.12□□□□□ -1.27
BRCA1-212ENST00000473961 AMOTL2Q9Y2J4 779 aa7.12□□□□□ -1.27
BRCA1-212ENST00000473961 SCO2A0A1W2PP80 73 aa7.11□□□□□ -1.27
BRCA1-212ENST00000473961 GRIN2CQ14957 1233 aa7.11□□□□□ -1.27
BRCA1-212ENST00000473961 SEPT12Q8IYM1 358 aa7.11□□□□□ -1.27
BRCA1-212ENST00000473961 SUV39H2Q9H5I1 410 aa7.11□□□□□ -1.27
BRCA1-212ENST00000473961 CHRNA4P43681 627 aa7.1□□□□□ -1.27
BRCA1-212ENST00000473961 DBN1Q16643 649 aa7.1□□□□□ -1.27
BRCA1-212ENST00000473961 OCSTAMPQ9BR26 566 aa7.1□□□□□ -1.27
BRCA1-212ENST00000473961 ERCC3P19447 782 aa7.09□□□□□ -1.27
BRCA1-212ENST00000473961 USP4Q13107 963 aa7.09□□□□□ -1.27
BRCA1-212ENST00000473961 OXLD1Q5BKU9 147 aa7.09□□□□□ -1.27
BRCA1-212ENST00000473961 FOXR1Q6PIV2 292 aa7.09□□□□□ -1.27
BRCA1-212ENST00000473961 SIX5Q8N196 739 aa7.09□□□□□ -1.27
BRCA1-212ENST00000473961 ZNF594Q96JF6 807 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-212ENST00000473961 ATP2B4P23634 1241 aa7.08□□□□□ -1.28
BRCA1-212ENST00000473961 SSFA2P28290 1259 aa7.08□□□□□ -1.28
BRCA1-212ENST00000473961 SEC13P55735 322 aa7.08□□□□□ -1.28
BRCA1-212ENST00000473961 GTF2IP78347 998 aa7.08□□□□□ -1.28
BRCA1-212ENST00000473961 PSME1Q06323 249 aa7.08□□□□□ -1.28
BRCA1-212ENST00000473961 DPYDQ12882 1025 aa7.08□□□□□ -1.28
BRCA1-212ENST00000473961 DOC2BQ14184 412 aa7.08□□□□□ -1.28
BRCA1-212ENST00000473961 ERFEQ4G0M1 354 aa7.08□□□□□ -1.28
BRCA1-212ENST00000473961 LYSMD3Q7Z3D4 306 aa7.08□□□□□ -1.28
BRCA1-212ENST00000473961 TXNDC2Q86VQ3 553 aa7.08□□□□□ -1.28
BRCA1-212ENST00000473961 GTPBP3Q969Y2 492 aaKnown RBP7.08□□□□□ -1.28
BRCA1-212ENST00000473961 OXCT2Q9BYC2 517 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-212ENST00000473961 ESF1Q9H501 851 aaKnown RBP7.08□□□□□ -1.28
BRCA1-212ENST00000473961 MYCP01106 439 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-212ENST00000473961 HOXB4P17483 251 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-212ENST00000473961 MX2P20592 715 aa7.07□□□□□ -1.28
BRCA1-212ENST00000473961 RBM25P49756 843 aaKnown RBP7.07□□□□□ -1.28
BRCA1-212ENST00000473961 LCE1DQ5T752 114 aa7.07□□□□□ -1.28
BRCA1-212ENST00000473961 C1orf229Q6ZS94 237 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-212ENST00000473961 C1orf216Q8TAB5 229 aa7.07□□□□□ -1.28
BRCA1-212ENST00000473961 RHOQP17081 205 aa7.06□□□□□ -1.28
BRCA1-212ENST00000473961 ARTNQ5T4W7 220 aa7.06□□□□□ -1.28
BRCA1-212ENST00000473961 LINC00114Q6XXX2 140 aa7.06□□□□□ -1.28
BRCA1-212ENST00000473961 FOXD4L4Q8WXT5 416 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-212ENST00000473961 ZFP64Q9NPA5 681 aa7.06□□□□□ -1.28
BRCA1-212ENST00000473961 E9PSI1 815 aa7.05□□□□□ -1.28
BRCA1-212ENST00000473961 GIGYF1O75420 1035 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-212ENST00000473961 CLDN10P78369 228 aa7.05□□□□□ -1.28
BRCA1-212ENST00000473961 DHX9Q08211 1270 aaKnown RBP7.05□□□□□ -1.28
BRCA1-212ENST00000473961 CCDC102BQ68D86 513 aa7.05□□□□□ -1.28
BRCA1-212ENST00000473961 RRAGCQ9HB90 399 aa7.05□□□□□ -1.28
BRCA1-212ENST00000473961 NSFL1CQ9UNZ2 370 aaKnown RBP7.05□□□□□ -1.28
BRCA1-212ENST00000473961 FAM69CQ0P6D2 419 aa7.04□□□□□ -1.28
BRCA1-212ENST00000473961 RIPOR1Q6ZS17 1223 aa7.04□□□□□ -1.28
BRCA1-212ENST00000473961 KDF1Q8NAX2 398 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-212ENST00000473961 TRERF1Q96PN7 1200 aa7.04□□□□□ -1.28
BRCA1-212ENST00000473961 CCDC85AQ96PX6 553 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-212ENST00000473961 KCTD15Q96SI1 283 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-212ENST00000473961 PCDHB11Q9Y5F2 797 aa7.04□□□□□ -1.28
BRCA1-212ENST00000473961 ADH1AP07327 375 aa7.03□□□□□ -1.28
BRCA1-212ENST00000473961 INTS6LQ5JSJ4 861 aaKnown RBP7.03□□□□□ -1.28
BRCA1-212ENST00000473961 PHLDB3Q6NSJ2 640 aa7.03□□□□□ -1.28
BRCA1-212ENST00000473961 TPCN2Q8NHX9 752 aa7.03□□□□□ -1.28
BRCA1-212ENST00000473961 ESPNB1AK53 854 aa7.02□□□□□ -1.29
BRCA1-212ENST00000473961 M0R2N6 131 aa7.02□□□□□ -1.29
BRCA1-212ENST00000473961 MAP2K3P46734 347 aa7.02□□□□□ -1.29
BRCA1-212ENST00000473961 PRICKLE2Q7Z3G6 844 aa7.02□□□□□ -1.29
BRCA1-212ENST00000473961 BCL11AQ9H165 835 aa7.02□□□□□ -1.29
BRCA1-212ENST00000473961 EGFL7Q9UHF1 273 aa7.02□□□□□ -1.29
BRCA1-212ENST00000473961 SOWAHDA6NJG2 315 aa7.01□□□□□ -1.29
BRCA1-212ENST00000473961 PTGIRP43119 386 aa7.01□□□□□ -1.29
BRCA1-212ENST00000473961 RSPO4Q2I0M5 234 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-212ENST00000473961 HINFPQ9BQA5 517 aa7.01□□□□□ -1.29
BRCA1-212ENST00000473961 BIN2Q9UBW5 565 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-212ENST00000473961 H7C1W4 665 aa7□□□□□ -1.29
BRCA1-212ENST00000473961 PRMT3O60678 531 aa7□□□□□ -1.29
BRCA1-212ENST00000473961 PTCD1O75127 700 aaKnown RBP7□□□□□ -1.29
BRCA1-212ENST00000473961 TSGA10IPQ3SY00 556 aa7□□□□□ -1.29
BRCA1-212ENST00000473961 NBPF11Q86T75 865 aa7□□□□□ -1.29
BRCA1-212ENST00000473961 EDARADDQ8WWZ3 215 aa7□□□□□ -1.29
BRCA1-212ENST00000473961 CXXC1Q9P0U4 656 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms