RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, human

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC3-214	ENST00000472398	IBSP	P21815	317 aa	Predicted RBP	4.06	□□□□□ -1.76
TTC3-214	ENST00000472398	RRM1	P23921	792 aa		4.06	□□□□□ -1.76
TTC3-214	ENST00000472398	UBE4A	Q14139	1066 aa		4.06	□□□□□ -1.76
TTC3-214	ENST00000472398	ENOX2	Q16206	610 aa	Known RBP	4.06	□□□□□ -1.76
TTC3-214	ENST00000472398	SWT1	Q5T5J6	900 aa	Known RBP	4.06	□□□□□ -1.76
TTC3-214	ENST00000472398	NBPF6	Q5VWK0	638 aa		4.06	□□□□□ -1.76
TTC3-214	ENST00000472398	PPP2R2D	Q66LE6	453 aa		4.06	□□□□□ -1.76
TTC3-214	ENST00000472398	ADGRD1	Q6QNK2	874 aa		4.06	□□□□□ -1.76
TTC3-214	ENST00000472398	FBXO33	Q7Z6M2	555 aa		4.06	□□□□□ -1.76
TTC3-214	ENST00000472398	FILIP1	Q7Z7B0	1213 aa		4.06	□□□□□ -1.76
TTC3-214	ENST00000472398	NBPF5P	Q86XG9	351 aa	Predicted RBP	4.06	□□□□□ -1.76
TTC3-214	ENST00000472398	MTMR14	Q8NCE2	650 aa		4.06	□□□□□ -1.76
TTC3-214	ENST00000472398	NBPF4	Q96M43	638 aa		4.06	□□□□□ -1.76
TTC3-214	ENST00000472398	MYCBP	Q99417	103 aa	Predicted RBP	4.06	□□□□□ -1.76
TTC3-214	ENST00000472398	LDHA	P00338	332 aa	Known RBP	4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	FGA	P02671	866 aa		4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	CLK2	P49760	499 aa	Known RBP	4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	MAP2K1	Q02750	393 aa	Predicted RBP	4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	SIM2	Q14190	667 aa	Predicted RBP	4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	SLF2	Q8IX21	1173 aa		4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	SYNPO2	Q9UMS6	1093 aa		4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	DDX11L8	A8MPP1	907 aa		4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	SOCS7	O14512	581 aa		4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	LMNB1	P20700	586 aa		4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	SCNN1A	P37088	669 aa		4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	SERPINB4	P48594	390 aa		4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	MARS	P56192	900 aa	Known RBP	4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	AMPD3	Q01432	767 aa		4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	LAMC2	Q13753	1193 aa		4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	KCTD2	Q14681	263 aa		4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	ZNF746	Q6NUN9	644 aa	Predicted RBP	4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	RSBN1L	Q6PCB5	846 aa	Predicted RBP	4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	CDC5L	Q99459	802 aa	Known RBP	4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	TRIM34	Q9BYJ4	488 aa		4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	STK26	Q9P289	416 aa		4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	SEPT9	Q9UHD8	586 aa	Predicted RBP	4.05	□□□□□ -1.76
TTC3-214	ENST00000472398	DYTN	A2CJ06	578 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	TIMM44	O43615	452 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	RPAIN	Q86UA6	219 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	TTC30A	Q86WT1	665 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	SVIP	Q8NHG7	77 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	GAS2L2	Q8NHY3	880 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	RNF217	Q8TC41	542 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	CXorf56	Q9H5V9	222 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	TCEAL9	Q9UHQ7	104 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	SLC45A1	Q9Y2W3	748 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	TNFRSF10B	O14763	440 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	CBFA2T2	O43439	604 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	NAT1	P18440	290 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	ABL2	P42684	1182 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	TNNI2	P48788	182 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	ODR4	Q5SWX8	454 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	SYCP2L	Q5T4T6	812 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	PRPF38B	Q5VTL8	546 aa	Known RBP	4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	RIC3	Q7Z5B4	369 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	ZFR	Q96KR1	1074 aa	Known RBP	4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	AGBL1	Q96MI9	1066 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	ARPC5L	Q9BPX5	153 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	IER2	Q9BTL4	223 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	KRTAP4-11	Q9BYQ6	195 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	BRINP2	Q9C0B6	783 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	LIMD1	Q9UGP4	676 aa		4.04	□□□□□ -1.76
TTC3-214	ENST00000472398	IPO8	O15397	1037 aa	Known RBP	4.03	□□□□□ -1.76
TTC3-214	ENST00000472398	HIP1R	O75146	1068 aa		4.03	□□□□□ -1.76
TTC3-214	ENST00000472398	NAT2	P11245	290 aa		4.03	□□□□□ -1.76
TTC3-214	ENST00000472398	GNAL	P38405	381 aa		4.03	□□□□□ -1.76
TTC3-214	ENST00000472398	ZRSR2	Q15696	482 aa	Known RBP	4.03	□□□□□ -1.76
TTC3-214	ENST00000472398	UVSSA	Q2YD98	709 aa		4.03	□□□□□ -1.76
TTC3-214	ENST00000472398	SAMD7	Q7Z3H4	446 aa		4.03	□□□□□ -1.76
TTC3-214	ENST00000472398	NUTM1	Q86Y26	1132 aa		4.03	□□□□□ -1.76
TTC3-214	ENST00000472398	BANK1	Q8NDB2	785 aa		4.03	□□□□□ -1.76
TTC3-214	ENST00000472398	SNRNP27	Q8WVK2	155 aa	Known RBP	4.03	□□□□□ -1.76
TTC3-214	ENST00000472398	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.03	□□□□□ -1.76
TTC3-214	ENST00000472398	ISY1	Q9ULR0	285 aa	Known RBP	4.03	□□□□□ -1.76
TTC3-214	ENST00000472398	LILRB3	O75022	631 aa		4.03	□□□□□ -1.77
TTC3-214	ENST00000472398	PDGFRB	P09619	1106 aa		4.03	□□□□□ -1.77
TTC3-214	ENST00000472398	SLC4A3	P48751	1232 aa		4.03	□□□□□ -1.77
TTC3-214	ENST00000472398	HDGF	P51858	240 aa	Known RBP	4.03	□□□□□ -1.77
TTC3-214	ENST00000472398	HSP90AA2P	Q14568	343 aa	Predicted RBP	4.03	□□□□□ -1.77
TTC3-214	ENST00000472398	HDGFL1	Q5TGJ6	251 aa		4.03	□□□□□ -1.77
TTC3-214	ENST00000472398	METTL16	Q86W50	562 aa	Known RBP	4.03	□□□□□ -1.77
TTC3-214	ENST00000472398	HSCB	Q8IWL3	235 aa		4.03	□□□□□ -1.77
TTC3-214	ENST00000472398	DRC7	Q8IY82	874 aa		4.03	□□□□□ -1.77
TTC3-214	ENST00000472398	MRPL50	Q8N5N7	158 aa	Known RBP	4.03	□□□□□ -1.77
TTC3-214	ENST00000472398	PPP1R12C	Q9BZL4	782 aa		4.03	□□□□□ -1.77
TTC3-214	ENST00000472398	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	4.03	□□□□□ -1.77
TTC3-214	ENST00000472398	IFT122	Q9HBG6	1241 aa		4.03	□□□□□ -1.77
TTC3-214	ENST00000472398	AS3MT	Q9HBK9	375 aa		4.03	□□□□□ -1.77
TTC3-214	ENST00000472398	CASS4	Q9NQ75	786 aa		4.03	□□□□□ -1.77
TTC3-214	ENST00000472398	AVEN	Q9NQS1	362 aa	Predicted RBP	4.03	□□□□□ -1.77
TTC3-214	ENST00000472398	MOXD2P	A6NHM9	499 aa		4.02	□□□□□ -1.77
TTC3-214	ENST00000472398	PRSS47	A8MTI9	375 aa		4.02	□□□□□ -1.77
TTC3-214	ENST00000472398	VIL1	P09327	827 aa	Known RBP	4.02	□□□□□ -1.77
TTC3-214	ENST00000472398	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.02	□□□□□ -1.77
TTC3-214	ENST00000472398	ALDH1L2	Q3SY69	923 aa		4.02	□□□□□ -1.77
TTC3-214	ENST00000472398	C10orf62	Q5T681	223 aa	Predicted RBP	4.02	□□□□□ -1.77
TTC3-214	ENST00000472398	USP48	Q86UV5	1035 aa		4.02	□□□□□ -1.77
TTC3-214	ENST00000472398	ZSCAN30	Q86W11	494 aa		4.02	□□□□□ -1.77
TTC3-214	ENST00000472398	RDH13	Q8NBN7	331 aa		4.02	□□□□□ -1.77

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