RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 RTF1Q92541 710 aaKnown RBP19.98■□□□□ 0.79
CALD1-215ENST00000472096 PNNQ9H307 717 aaKnown RBP19.98■□□□□ 0.79
CALD1-215ENST00000472096 HTATSF1O43719 755 aaKnown RBP19.97■□□□□ 0.79
CALD1-215ENST00000472096 CRKLP46109 303 aaKnown RBP19.97■□□□□ 0.79
CALD1-215ENST00000472096 MCM10Q7L590 875 aa19.97■□□□□ 0.79
CALD1-215ENST00000472096 DNAJC10Q8IXB1 793 aa19.97■□□□□ 0.79
CALD1-215ENST00000472096 TTC5Q8N0Z6 440 aa19.97■□□□□ 0.79
CALD1-215ENST00000472096 RTCBQ9Y3I0 505 aaKnown RBP19.97■□□□□ 0.79
CALD1-215ENST00000472096 LAMB4A4D0S4 1761 aa19.96■□□□□ 0.79
CALD1-215ENST00000472096 DCTN1Q14203 1278 aa19.96■□□□□ 0.79
CALD1-215ENST00000472096 NFE2L2Q16236 605 aa19.96■□□□□ 0.79
CALD1-215ENST00000472096 ZNF790Q6PG37 636 aa19.96■□□□□ 0.79
CALD1-215ENST00000472096 FHDC1Q9C0D6 1143 aaPredicted RBP19.96■□□□□ 0.79
CALD1-215ENST00000472096 RPS6KA4O75676 772 aa19.95■□□□□ 0.78
CALD1-215ENST00000472096 VSIG10Q8N0Z9 540 aa19.95■□□□□ 0.78
CALD1-215ENST00000472096 HEG1Q9ULI3 1381 aa19.95■□□□□ 0.78
CALD1-215ENST00000472096 ZNF496Q96IT1 587 aaPredicted RBP19.94■□□□□ 0.78
CALD1-215ENST00000472096 RTN4Q9NQC3 1192 aaKnown RBP19.94■□□□□ 0.78
CALD1-215ENST00000472096 BTBD11A6QL63 1104 aa19.93■□□□□ 0.78
CALD1-215ENST00000472096 CCDC87Q9NVE4 849 aa19.93■□□□□ 0.78
CALD1-215ENST00000472096 CYP19A1P11511 503 aaPredicted RBP19.92■□□□□ 0.78
CALD1-215ENST00000472096 WDR43Q15061 677 aaKnown RBP eCLIP19.92■□□□□ 0.78
CALD1-215ENST00000472096 TRAPPC3LQ5T215 181 aa19.92■□□□□ 0.78
CALD1-215ENST00000472096 INTS5Q6P9B9 1019 aaKnown RBP19.92■□□□□ 0.78
CALD1-215ENST00000472096 SYT17Q9BSW7 474 aa19.92■□□□□ 0.78
CALD1-215ENST00000472096 KIF13BQ9NQT8 1826 aa19.91■□□□□ 0.78
CALD1-215ENST00000472096 KCNQ3O43525 872 aa19.91■□□□□ 0.78
CALD1-215ENST00000472096 ARHGEF1Q92888 912 aaKnown RBP19.91■□□□□ 0.78
CALD1-215ENST00000472096 SCN7AQ01118 1682 aa19.91■□□□□ 0.78
CALD1-215ENST00000472096 FMNL2Q96PY5 1086 aa19.9■□□□□ 0.78
CALD1-215ENST00000472096 SOS1Q07889 1333 aaPredicted RBP19.9■□□□□ 0.78
CALD1-215ENST00000472096 COL15A1P39059 1388 aa19.89■□□□□ 0.77
CALD1-215ENST00000472096 CCDC146Q8IYE0 955 aa19.89■□□□□ 0.77
CALD1-215ENST00000472096 KLHL34Q8N239 644 aa19.89■□□□□ 0.77
CALD1-215ENST00000472096 ZBTB1Q9Y2K1 713 aa19.89■□□□□ 0.77
CALD1-215ENST00000472096 RFC4P35249 363 aa19.88■□□□□ 0.77
CALD1-215ENST00000472096 BCORQ6W2J9 1755 aa19.88■□□□□ 0.77
CALD1-215ENST00000472096 USP42Q9H9J4 1324 aaKnown RBP19.87■□□□□ 0.77
CALD1-215ENST00000472096 TMPOP42166 694 aaKnown RBP19.87■□□□□ 0.77
CALD1-215ENST00000472096 THUMPD2Q9BTF0 503 aaKnown RBP19.87■□□□□ 0.77
CALD1-215ENST00000472096 ADAMTS8Q9UP79 889 aa19.87■□□□□ 0.77
CALD1-215ENST00000472096 KIAA1551Q9HCM1 1747 aa19.86■□□□□ 0.77
CALD1-215ENST00000472096 STARD3NLO95772 234 aa19.86■□□□□ 0.77
CALD1-215ENST00000472096 GYS1P13807 737 aa19.86■□□□□ 0.77
CALD1-215ENST00000472096 TAF7Q15545 349 aaPredicted RBP19.86■□□□□ 0.77
CALD1-215ENST00000472096 RUNDC1Q96C34 613 aa19.86■□□□□ 0.77
CALD1-215ENST00000472096 TEX13AQ9BXU3 409 aaPredicted RBP19.86■□□□□ 0.77
CALD1-215ENST00000472096 RIPK4P57078 832 aa19.85■□□□□ 0.77
CALD1-215ENST00000472096 AFDNP55196 1824 aaKnown RBP19.84■□□□□ 0.77
CALD1-215ENST00000472096 LMOD3Q0VAK6 560 aa19.84■□□□□ 0.77
CALD1-215ENST00000472096 NLGN1Q8N2Q7 840 aa19.84■□□□□ 0.77
CALD1-215ENST00000472096 SRP68Q9UHB9 627 aaKnown RBP19.84■□□□□ 0.77
CALD1-215ENST00000472096 CHD4Q14839 1912 aa19.83■□□□□ 0.77
CALD1-215ENST00000472096 ANP32CO43423 234 aa19.83■□□□□ 0.77
CALD1-215ENST00000472096 MMP10P09238 476 aa19.83■□□□□ 0.77
CALD1-215ENST00000472096 CANXP27824 592 aaKnown RBP19.83■□□□□ 0.77
CALD1-215ENST00000472096 CCDC184Q52MB2 194 aa19.83■□□□□ 0.77
CALD1-215ENST00000472096 NLGN2Q8NFZ4 835 aa19.83■□□□□ 0.77
CALD1-215ENST00000472096 PNISRQ8TF01 805 aaKnown RBP19.83■□□□□ 0.77
CALD1-215ENST00000472096 MIS18AQ9NYP9 233 aa19.83■□□□□ 0.77
CALD1-215ENST00000472096 RRP7AQ9Y3A4 280 aaKnown RBP19.83■□□□□ 0.77
CALD1-215ENST00000472096 PRAMEF22A3QJZ6 481 aa19.82■□□□□ 0.76
CALD1-215ENST00000472096 N4BP2Q86UW6 1770 aaPredicted RBP19.82■□□□□ 0.76
CALD1-215ENST00000472096 NRXN2Q9P2S2 1712 aa19.82■□□□□ 0.76
CALD1-215ENST00000472096 SNRPA1P09661 255 aaKnown RBP19.81■□□□□ 0.76
CALD1-215ENST00000472096 EIF5P55010 431 aaKnown RBP19.81■□□□□ 0.76
CALD1-215ENST00000472096 CD2APQ9Y5K6 639 aa19.81■□□□□ 0.76
CALD1-215ENST00000472096 C10orf71Q711Q0 1435 aa19.81■□□□□ 0.76
CALD1-215ENST00000472096 BRCA1P38398 1863 aaKnown RBP19.8■□□□□ 0.76
CALD1-215ENST00000472096 NEUROD2Q15784 382 aa19.8■□□□□ 0.76
CALD1-215ENST00000472096 NARFQ9UHQ1 456 aa19.8■□□□□ 0.76
CALD1-215ENST00000472096 ZPR1O75312 459 aa19.79■□□□□ 0.76
CALD1-215ENST00000472096 A1BGP04217 495 aa19.79■□□□□ 0.76
CALD1-215ENST00000472096 USPL1Q5W0Q7 1092 aa19.79■□□□□ 0.76
CALD1-215ENST00000472096 USP16Q9Y5T5 823 aa19.79■□□□□ 0.76
CALD1-215ENST00000472096 IL6STP40189 918 aaPredicted RBP19.78■□□□□ 0.76
CALD1-215ENST00000472096 IFNLR1Q8IU57 520 aaPredicted RBP19.78■□□□□ 0.76
CALD1-215ENST00000472096 TRIM35Q9UPQ4 493 aa19.78■□□□□ 0.76
CALD1-215ENST00000472096 A0A087WZG4 1122 aa19.77■□□□□ 0.76
CALD1-215ENST00000472096 EIF4A1P60842 406 aaKnown RBP19.77■□□□□ 0.76
CALD1-215ENST00000472096 TSPYL4Q9UJ04 414 aa19.77■□□□□ 0.76
CALD1-215ENST00000472096 DDR1Q08345 913 aa19.76■□□□□ 0.75
CALD1-215ENST00000472096 BCL2L12Q9HB09 334 aa19.76■□□□□ 0.75
CALD1-215ENST00000472096 MRS2Q9HD23 443 aa19.76■□□□□ 0.75
CALD1-215ENST00000472096 ZNF330Q9Y3S2 320 aaPredicted RBP19.76■□□□□ 0.75
CALD1-215ENST00000472096 PARP3Q9Y6F1 533 aa19.76■□□□□ 0.75
CALD1-215ENST00000472096 PXDNLA1KZ92 1463 aa19.75■□□□□ 0.75
CALD1-215ENST00000472096 GIGYF1O75420 1035 aaPredicted RBP19.75■□□□□ 0.75
CALD1-215ENST00000472096 PIP4K2AP48426 406 aaPredicted RBP19.75■□□□□ 0.75
CALD1-215ENST00000472096 BABAM1Q9NWV8 329 aa19.75■□□□□ 0.75
CALD1-215ENST00000472096 APAF1O14727 1248 aa19.74■□□□□ 0.75
CALD1-215ENST00000472096 DLEC1Q9Y238 1755 aa19.74■□□□□ 0.75
CALD1-215ENST00000472096 POLRMTO00411 1230 aaKnown RBP19.73■□□□□ 0.75
CALD1-215ENST00000472096 TM4SF1P30408 202 aa19.73■□□□□ 0.75
CALD1-215ENST00000472096 REM2Q8IYK8 340 aaPredicted RBP19.73■□□□□ 0.75
CALD1-215ENST00000472096 NUP98P52948 1817 aa19.73■□□□□ 0.75
CALD1-215ENST00000472096 GOLGB1Q14789 3259 aaKnown RBP19.73■□□□□ 0.75
CALD1-215ENST00000472096 NBPF26B4DH59 902 aa19.72■□□□□ 0.75
CALD1-215ENST00000472096 NFIXQ14938 502 aa19.72■□□□□ 0.75
CALD1-215ENST00000472096 GPR162Q16538 588 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms