RNA–Protein interactions for RNA: ENST00000471939.5

SH2D3C-210, Transcript of SH2 domain containing 3C, humanhuman

TSL 5

Gene SH2D3C, Length 936 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-210ENST00000471939 CCDC146Q8IYE0 955 aa17.28■□□□□ 0.36
SH2D3C-210ENST00000471939 KLHL34Q8N239 644 aa17.28■□□□□ 0.36
SH2D3C-210ENST00000471939 MSL1Q68DK7 614 aa17.27■□□□□ 0.36
SH2D3C-210ENST00000471939 KCNQ3O43525 872 aa17.26■□□□□ 0.35
SH2D3C-210ENST00000471939 NLGN1Q8N2Q7 840 aa17.26■□□□□ 0.35
SH2D3C-210ENST00000471939 SOS1Q07889 1333 aaPredicted RBP17.25■□□□□ 0.35
SH2D3C-210ENST00000471939 SENP3-EIF4A1A0A087X0R7 540 aa17.25■□□□□ 0.35
SH2D3C-210ENST00000471939 SNRPA1P09661 255 aaKnown RBP17.25■□□□□ 0.35
SH2D3C-210ENST00000471939 BABAM1Q9NWV8 329 aa17.25■□□□□ 0.35
SH2D3C-210ENST00000471939 PELP1Q8IZL8 1130 aaKnown RBP17.24■□□□□ 0.35
SH2D3C-210ENST00000471939 THUMPD2Q9BTF0 503 aaKnown RBP17.24■□□□□ 0.35
SH2D3C-210ENST00000471939 ZBTB1Q9Y2K1 713 aa17.24■□□□□ 0.35
SH2D3C-210ENST00000471939 GYS1P13807 737 aa17.23■□□□□ 0.35
SH2D3C-210ENST00000471939 USP42Q9H9J4 1324 aaKnown RBP17.22■□□□□ 0.35
SH2D3C-210ENST00000471939 A0A087WZG4 1122 aa17.22■□□□□ 0.35
SH2D3C-210ENST00000471939 NEUROD2Q15784 382 aa17.22■□□□□ 0.35
SH2D3C-210ENST00000471939 CCDC184Q52MB2 194 aa17.22■□□□□ 0.35
SH2D3C-210ENST00000471939 MRS2Q9HD23 443 aa17.22■□□□□ 0.35
SH2D3C-210ENST00000471939 MIS18AQ9NYP9 233 aa17.22■□□□□ 0.35
SH2D3C-210ENST00000471939 RRP7AQ9Y3A4 280 aaKnown RBP17.22■□□□□ 0.35
SH2D3C-210ENST00000471939 C4AP0C0L4 1744 aa17.21■□□□□ 0.35
SH2D3C-210ENST00000471939 COL15A1P39059 1388 aa17.21■□□□□ 0.35
SH2D3C-210ENST00000471939 ZPR1O75312 459 aa17.21■□□□□ 0.35
SH2D3C-210ENST00000471939 CANXP27824 592 aaKnown RBP17.21■□□□□ 0.35
SH2D3C-210ENST00000471939 IL6STP40189 918 aaPredicted RBP17.21■□□□□ 0.35
SH2D3C-210ENST00000471939 EIF5P55010 431 aaKnown RBP17.21■□□□□ 0.35
SH2D3C-210ENST00000471939 C1QTNF8P60827 252 aa17.21■□□□□ 0.35
SH2D3C-210ENST00000471939 KDM3BQ7LBC6 1761 aa17.2■□□□□ 0.34
SH2D3C-210ENST00000471939 MMP10P09238 476 aa17.2■□□□□ 0.34
SH2D3C-210ENST00000471939 EIF4A1P60842 406 aaKnown RBP17.2■□□□□ 0.34
SH2D3C-210ENST00000471939 NARFQ9UHQ1 456 aa17.2■□□□□ 0.34
SH2D3C-210ENST00000471939 TSPYL4Q9UJ04 414 aa17.2■□□□□ 0.34
SH2D3C-210ENST00000471939 TRIM35Q9UPQ4 493 aa17.2■□□□□ 0.34
SH2D3C-210ENST00000471939 CD2APQ9Y5K6 639 aa17.2■□□□□ 0.34
SH2D3C-210ENST00000471939 USP16Q9Y5T5 823 aa17.2■□□□□ 0.34
SH2D3C-210ENST00000471939 APAF1O14727 1248 aa17.19■□□□□ 0.34
SH2D3C-210ENST00000471939 A1BGP04217 495 aa17.19■□□□□ 0.34
SH2D3C-210ENST00000471939 NPM2Q86SE8 214 aaKnown RBP17.19■□□□□ 0.34
SH2D3C-210ENST00000471939 SRP68Q9UHB9 627 aaKnown RBP17.19■□□□□ 0.34
SH2D3C-210ENST00000471939 GIGYF1O75420 1035 aaPredicted RBP17.18■□□□□ 0.34
SH2D3C-210ENST00000471939 PRAMEF22A3QJZ6 481 aa17.17■□□□□ 0.34
SH2D3C-210ENST00000471939 FKBP8Q14318 412 aa17.17■□□□□ 0.34
SH2D3C-210ENST00000471939 USPL1Q5W0Q7 1092 aa17.17■□□□□ 0.34
SH2D3C-210ENST00000471939 PARP3Q9Y6F1 533 aa17.17■□□□□ 0.34
SH2D3C-210ENST00000471939 CHL1O00533 1208 aa17.16■□□□□ 0.34
SH2D3C-210ENST00000471939 CALD1Q05682 793 aaKnown RBP17.16■□□□□ 0.34
SH2D3C-210ENST00000471939 GOLGB1Q14789 3259 aaKnown RBP17.15■□□□□ 0.34
SH2D3C-210ENST00000471939 GRIN3BO60391 1043 aa17.14■□□□□ 0.33
SH2D3C-210ENST00000471939 TM4SF1P30408 202 aa17.14■□□□□ 0.33
SH2D3C-210ENST00000471939 NCBP3Q53F19 620 aaKnown RBP17.14■□□□□ 0.33
SH2D3C-210ENST00000471939 ZNF330Q9Y3S2 320 aaPredicted RBP17.14■□□□□ 0.33
SH2D3C-210ENST00000471939 LAMB4A4D0S4 1761 aa17.14■□□□□ 0.33
SH2D3C-210ENST00000471939 UTRNP46939 3433 aa17.14■□□□□ 0.33
SH2D3C-210ENST00000471939 NLGN2Q8NFZ4 835 aa17.13■□□□□ 0.33
SH2D3C-210ENST00000471939 CFAP44Q96MT7 982 aa17.13■□□□□ 0.33
SH2D3C-210ENST00000471939 BCL2L12Q9HB09 334 aa17.13■□□□□ 0.33
SH2D3C-210ENST00000471939 ERBB4Q15303 1308 aa17.13■□□□□ 0.33
SH2D3C-210ENST00000471939 RGL2O15211 777 aa17.12■□□□□ 0.33
SH2D3C-210ENST00000471939 CCDC27Q2M243 656 aa17.12■□□□□ 0.33
SH2D3C-210ENST00000471939 DZIP3Q86Y13 1208 aaKnown RBP17.12■□□□□ 0.33
SH2D3C-210ENST00000471939 TBC1D2BQ9UPU7 963 aa17.12■□□□□ 0.33
SH2D3C-210ENST00000471939 LAS1LQ9Y4W2 734 aaKnown RBP17.12■□□□□ 0.33
SH2D3C-210ENST00000471939 NBPF26B4DH59 902 aa17.11■□□□□ 0.33
SH2D3C-210ENST00000471939 POLRMTO00411 1230 aaKnown RBP17.11■□□□□ 0.33
SH2D3C-210ENST00000471939 DDR1Q08345 913 aa17.11■□□□□ 0.33
SH2D3C-210ENST00000471939 NBPF10Q6P3W6 841 aaKnown RBP17.11■□□□□ 0.33
SH2D3C-210ENST00000471939 NBPF15Q8N660 670 aa17.11■□□□□ 0.33
SH2D3C-210ENST00000471939 IFT57Q9NWB7 429 aa17.11■□□□□ 0.33
SH2D3C-210ENST00000471939 C10orf71Q711Q0 1435 aa17.11■□□□□ 0.33
SH2D3C-210ENST00000471939 CAMTA2O94983 1202 aa17.1■□□□□ 0.33
SH2D3C-210ENST00000471939 ZNF853P0CG23 659 aa17.1■□□□□ 0.33
SH2D3C-210ENST00000471939 PIP4K2AP48426 406 aaPredicted RBP17.1■□□□□ 0.33
SH2D3C-210ENST00000471939 TGFB2P61812 414 aa17.1■□□□□ 0.33
SH2D3C-210ENST00000471939 GNAI1P63096 354 aa17.1■□□□□ 0.33
SH2D3C-210ENST00000471939 NFIXQ14938 502 aa17.1■□□□□ 0.33
SH2D3C-210ENST00000471939 CLEC4GQ6UXB4 293 aa17.1■□□□□ 0.33
SH2D3C-210ENST00000471939 SCN7AQ01118 1682 aa17.1■□□□□ 0.33
SH2D3C-210ENST00000471939 HOXB7P09629 217 aa17.09■□□□□ 0.33
SH2D3C-210ENST00000471939 ZNF652Q9Y2D9 606 aa17.09■□□□□ 0.33
SH2D3C-210ENST00000471939 KIF13BQ9NQT8 1826 aa17.09■□□□□ 0.33
SH2D3C-210ENST00000471939 CHD4Q14839 1912 aa17.09■□□□□ 0.33
SH2D3C-210ENST00000471939 TBC1D9BQ66K14 1250 aa17.07■□□□□ 0.32
SH2D3C-210ENST00000471939 MBIPQ9NS73 344 aa17.07■□□□□ 0.32
SH2D3C-210ENST00000471939 SERPINB2P05120 415 aa17.06■□□□□ 0.32
SH2D3C-210ENST00000471939 EIF2S2P20042 333 aaKnown RBP17.06■□□□□ 0.32
SH2D3C-210ENST00000471939 WWC1Q8IX03 1113 aa17.06■□□□□ 0.32
SH2D3C-210ENST00000471939 FAM9BQ8IZU0 186 aa17.06■□□□□ 0.32
SH2D3C-210ENST00000471939 NGEFQ8N5V2 710 aa17.06■□□□□ 0.32
SH2D3C-210ENST00000471939 SETDB2Q96T68 719 aa17.06■□□□□ 0.32
SH2D3C-210ENST00000471939 BCORQ6W2J9 1755 aa17.06■□□□□ 0.32
SH2D3C-210ENST00000471939 CARMIL3Q8ND23 1372 aa17.05■□□□□ 0.32
SH2D3C-210ENST00000471939 IL16Q14005 1332 aa17.05■□□□□ 0.32
SH2D3C-210ENST00000471939 ERVV-1B6SEH8 477 aa17.05■□□□□ 0.32
SH2D3C-210ENST00000471939 BICDL1Q6ZP65 573 aa17.05■□□□□ 0.32
SH2D3C-210ENST00000471939 PXDNLA1KZ92 1463 aa17.05■□□□□ 0.32
SH2D3C-210ENST00000471939 NRXN2Q9P2S2 1712 aa17.04■□□□□ 0.32
SH2D3C-210ENST00000471939 MYL6BP14649 208 aa17.04■□□□□ 0.32
SH2D3C-210ENST00000471939 KIF6Q6ZMV9 814 aa17.04■□□□□ 0.32
SH2D3C-210ENST00000471939 MAP3K15Q6ZN16 1313 aa17.03■□□□□ 0.32
SH2D3C-210ENST00000471939 CCER2I3L3R5 266 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms