RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 TIMMDC1Q9NPL8 285 aa8.67□□□□□ -1.02
CDHR3-208ENST00000471910 CARNS1A5YM72 827 aa8.66□□□□□ -1.02
CDHR3-208ENST00000471910 LCE2BO14633 110 aa8.66□□□□□ -1.02
CDHR3-208ENST00000471910 RHOQP17081 205 aa8.66□□□□□ -1.02
CDHR3-208ENST00000471910 NOS2P35228 1153 aa8.66□□□□□ -1.02
CDHR3-208ENST00000471910 PHKA2P46019 1235 aa8.66□□□□□ -1.02
CDHR3-208ENST00000471910 PLA2G4AP47712 749 aa8.66□□□□□ -1.02
CDHR3-208ENST00000471910 AIDAQ96BJ3 306 aa8.66□□□□□ -1.02
CDHR3-208ENST00000471910 TRAIPQ9BWF2 469 aa8.66□□□□□ -1.02
CDHR3-208ENST00000471910 CXXC1Q9P0U4 656 aaPredicted RBP8.66□□□□□ -1.02
CDHR3-208ENST00000471910 NBPF1Q3BBV0 1214 aa8.65□□□□□ -1.02
CDHR3-208ENST00000471910 L3MBTL2Q969R5 705 aa8.65□□□□□ -1.02
CDHR3-208ENST00000471910 MTMR7Q9Y216 660 aa8.65□□□□□ -1.02
CDHR3-208ENST00000471910 USP3Q9Y6I4 520 aa8.65□□□□□ -1.02
CDHR3-208ENST00000471910 SOBPA7XYQ1 873 aa8.64□□□□□ -1.03
CDHR3-208ENST00000471910 C21orf2O43822 256 aa8.64□□□□□ -1.03
CDHR3-208ENST00000471910 PTCD1O75127 700 aaKnown RBP8.64□□□□□ -1.03
CDHR3-208ENST00000471910 SSFA2P28290 1259 aa8.64□□□□□ -1.03
CDHR3-208ENST00000471910 C2orf49Q9BVC5 232 aaPredicted RBP8.64□□□□□ -1.03
CDHR3-208ENST00000471910 A0A1B0GTH6 734 aa8.63□□□□□ -1.03
CDHR3-208ENST00000471910 BRD1O95696 1058 aa8.63□□□□□ -1.03
CDHR3-208ENST00000471910 SNRPBP14678 240 aaKnown RBP8.63□□□□□ -1.03
CDHR3-208ENST00000471910 TATP17735 454 aaPredicted RBP8.63□□□□□ -1.03
CDHR3-208ENST00000471910 OCLNQ16625 522 aa8.63□□□□□ -1.03
CDHR3-208ENST00000471910 ZNF787Q6DD87 383 aa8.63□□□□□ -1.03
CDHR3-208ENST00000471910 C1orf216Q8TAB5 229 aa8.63□□□□□ -1.03
CDHR3-208ENST00000471910 PARP3Q9Y6F1 533 aa8.63□□□□□ -1.03
CDHR3-208ENST00000471910 PTSQ03393 145 aa8.62□□□□□ -1.03
CDHR3-208ENST00000471910 ZDHHC3Q9NYG2 299 aa8.62□□□□□ -1.03
CDHR3-208ENST00000471910 DYRK1BQ9Y463 629 aa8.62□□□□□ -1.03
CDHR3-208ENST00000471910 HIRAP54198 1017 aaPredicted RBP8.61□□□□□ -1.03
CDHR3-208ENST00000471910 ZNF295-AS1Q8N0V1 137 aa8.61□□□□□ -1.03
CDHR3-208ENST00000471910 ZDHHC1Q8WTX9 485 aa8.61□□□□□ -1.03
CDHR3-208ENST00000471910 GAS2L1Q99501 681 aaPredicted RBP8.61□□□□□ -1.03
CDHR3-208ENST00000471910 SLAIN2Q9P270 581 aa8.61□□□□□ -1.03
CDHR3-208ENST00000471910 HCN4Q9Y3Q4 1203 aa8.61□□□□□ -1.03
CDHR3-208ENST00000471910 PATL2C9JE40 543 aaKnown RBP8.6□□□□□ -1.03
CDHR3-208ENST00000471910 EML1O00423 815 aa8.6□□□□□ -1.03
CDHR3-208ENST00000471910 F11P03951 625 aa8.6□□□□□ -1.03
CDHR3-208ENST00000471910 FKBP5Q13451 457 aaPredicted RBP8.6□□□□□ -1.03
CDHR3-208ENST00000471910 C1orf53Q5VUE5 145 aa8.6□□□□□ -1.03
CDHR3-208ENST00000471910 PGBD3Q8N328 593 aa8.6□□□□□ -1.03
CDHR3-208ENST00000471910 COL26A1Q96A83 441 aa8.6□□□□□ -1.03
CDHR3-208ENST00000471910 NGLY1Q96IV0 654 aa8.6□□□□□ -1.03
CDHR3-208ENST00000471910 NEUROD4Q9HD90 331 aa8.6□□□□□ -1.03
CDHR3-208ENST00000471910 SLC35F4A4IF30 521 aa8.59□□□□□ -1.03
CDHR3-208ENST00000471910 POTECB2RU33 542 aa8.59□□□□□ -1.03
CDHR3-208ENST00000471910 ARID4AP29374 1257 aaPredicted RBP8.59□□□□□ -1.03
CDHR3-208ENST00000471910 POTEAQ6S8J7 498 aa8.59□□□□□ -1.03
CDHR3-208ENST00000471910 BICDL1Q6ZP65 573 aa8.59□□□□□ -1.03
CDHR3-208ENST00000471910 KCTD17Q8N5Z5 321 aa8.59□□□□□ -1.03
CDHR3-208ENST00000471910 MKNK1Q9BUB5 465 aa8.59□□□□□ -1.03
CDHR3-208ENST00000471910 PHACTR1Q9C0D0 580 aa8.59□□□□□ -1.03
CDHR3-208ENST00000471910 H7C1W4 665 aa8.58□□□□□ -1.04
CDHR3-208ENST00000471910 MSX1P28360 303 aa8.58□□□□□ -1.04
CDHR3-208ENST00000471910 HIF1AQ16665 826 aa8.58□□□□□ -1.04
CDHR3-208ENST00000471910 ARSJQ5FYB0 599 aaPredicted RBP8.58□□□□□ -1.04
CDHR3-208ENST00000471910 RIPOR1Q6ZS17 1223 aa8.58□□□□□ -1.04
CDHR3-208ENST00000471910 ALDH16A1Q8IZ83 802 aa8.58□□□□□ -1.04
CDHR3-208ENST00000471910 CCDC155Q8N6L0 562 aa8.58□□□□□ -1.04
CDHR3-208ENST00000471910 CCER1Q8TC90 406 aaPredicted RBP8.58□□□□□ -1.04
CDHR3-208ENST00000471910 GPC6Q9Y625 555 aaPredicted RBP8.58□□□□□ -1.04
CDHR3-208ENST00000471910 TXLNAP40222 546 aa8.57□□□□□ -1.04
CDHR3-208ENST00000471910 SH3PXD2AQ5TCZ1 1133 aa8.57□□□□□ -1.04
CDHR3-208ENST00000471910 RHPN1Q8TCX5 695 aa8.57□□□□□ -1.04
CDHR3-208ENST00000471910 GJA3Q9Y6H8 435 aa8.57□□□□□ -1.04
CDHR3-208ENST00000471910 SENP3-EIF4A1A0A087X0R7 540 aa8.56□□□□□ -1.04
CDHR3-208ENST00000471910 KCNA1Q09470 495 aa8.56□□□□□ -1.04
CDHR3-208ENST00000471910 RTN1Q16799 776 aa8.56□□□□□ -1.04
CDHR3-208ENST00000471910 PHLDB3Q6NSJ2 640 aa8.56□□□□□ -1.04
CDHR3-208ENST00000471910 AEBP1Q8IUX7 1158 aa8.56□□□□□ -1.04
CDHR3-208ENST00000471910 GPAMQ9HCL2 828 aa8.56□□□□□ -1.04
CDHR3-208ENST00000471910 LBRQ14739 615 aaKnown RBP8.55□□□□□ -1.04
CDHR3-208ENST00000471910 NAA30Q147X3 362 aaPredicted RBP8.55□□□□□ -1.04
CDHR3-208ENST00000471910 EFHC2Q5JST6 749 aa8.55□□□□□ -1.04
CDHR3-208ENST00000471910 C16orf46Q6P387 395 aa8.55□□□□□ -1.04
CDHR3-208ENST00000471910 GMCL1Q96IK5 515 aa8.55□□□□□ -1.04
CDHR3-208ENST00000471910 ANKIB1Q9P2G1 1089 aa8.55□□□□□ -1.04
CDHR3-208ENST00000471910 MYO19Q96H55 970 aa8.54□□□□□ -1.04
CDHR3-208ENST00000471910 CRISPLD1Q9H336 500 aa8.54□□□□□ -1.04
CDHR3-208ENST00000471910 A0A1W2PNR3 127 aa8.53□□□□□ -1.04
CDHR3-208ENST00000471910 PPFIA3O75145 1194 aa8.53□□□□□ -1.04
CDHR3-208ENST00000471910 ATP4AP20648 1035 aa8.53□□□□□ -1.04
CDHR3-208ENST00000471910 ITGA6P23229 1130 aa8.53□□□□□ -1.04
CDHR3-208ENST00000471910 C11orf91Q3C1V1 193 aa8.53□□□□□ -1.04
CDHR3-208ENST00000471910 ZIC5Q96T25 663 aa8.53□□□□□ -1.04
CDHR3-208ENST00000471910 RUBCNLQ9H714 662 aa8.53□□□□□ -1.04
CDHR3-208ENST00000471910 NXF1Q9UBU9 619 aaKnown RBP8.53□□□□□ -1.04
CDHR3-208ENST00000471910 FOXR1Q6PIV2 292 aa8.52□□□□□ -1.05
CDHR3-208ENST00000471910 NLRP8Q86W28 1048 aa8.52□□□□□ -1.05
CDHR3-208ENST00000471910 NPAS3Q8IXF0 933 aa8.52□□□□□ -1.05
CDHR3-208ENST00000471910 TRIM22Q8IYM9 498 aa8.52□□□□□ -1.05
CDHR3-208ENST00000471910 NUCKS1Q9H1E3 243 aaKnown RBP8.52□□□□□ -1.05
CDHR3-208ENST00000471910 QTRT2Q9H974 415 aaKnown RBP8.52□□□□□ -1.05
CDHR3-208ENST00000471910 SEPT3Q9UH03 358 aa8.52□□□□□ -1.05
CDHR3-208ENST00000471910 ABL1P00519 1130 aa8.51□□□□□ -1.05
CDHR3-208ENST00000471910 BRD2P25440 801 aaKnown RBP8.51□□□□□ -1.05
CDHR3-208ENST00000471910 SCNN1AP37088 669 aa8.51□□□□□ -1.05
CDHR3-208ENST00000471910 COX20Q5RI15 118 aa8.51□□□□□ -1.05
CDHR3-208ENST00000471910 FIGNL1Q6PIW4 674 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms