RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.67□□□□□ -0.38
GGPS1-204ENST00000471812 GNPATO15228 680 aa12.67□□□□□ -0.38
GGPS1-204ENST00000471812 DCTN1Q14203 1278 aa12.67□□□□□ -0.38
GGPS1-204ENST00000471812 NLGN2Q8NFZ4 835 aa12.67□□□□□ -0.38
GGPS1-204ENST00000471812 AK7Q96M32 723 aa12.67□□□□□ -0.38
GGPS1-204ENST00000471812 DNAJC10Q8IXB1 793 aa12.66□□□□□ -0.38
GGPS1-204ENST00000471812 CFAP53Q96M91 514 aa12.66□□□□□ -0.38
GGPS1-204ENST00000471812 ARXQ96QS3 562 aa12.66□□□□□ -0.38
GGPS1-204ENST00000471812 SYT17Q9BSW7 474 aa12.66□□□□□ -0.38
GGPS1-204ENST00000471812 UTRNP46939 3433 aa12.65□□□□□ -0.38
GGPS1-204ENST00000471812 MCM10Q7L590 875 aa12.65□□□□□ -0.38
GGPS1-204ENST00000471812 CIZ1Q9ULV3 898 aaPredicted RBP12.65□□□□□ -0.38
GGPS1-204ENST00000471812 CREBZFQ9NS37 354 aa12.64□□□□□ -0.39
GGPS1-204ENST00000471812 KIAA1551Q9HCM1 1747 aa12.63□□□□□ -0.39
GGPS1-204ENST00000471812 CRKLP46109 303 aaKnown RBP12.63□□□□□ -0.39
GGPS1-204ENST00000471812 NUBP1P53384 320 aa12.63□□□□□ -0.39
GGPS1-204ENST00000471812 INTS5Q6P9B9 1019 aaKnown RBP12.63□□□□□ -0.39
GGPS1-204ENST00000471812 SLC16A10Q8TF71 515 aa12.63□□□□□ -0.39
GGPS1-204ENST00000471812 PLEKHF1Q96S99 279 aa12.63□□□□□ -0.39
GGPS1-204ENST00000471812 THUMPD2Q9BTF0 503 aaKnown RBP12.63□□□□□ -0.39
GGPS1-204ENST00000471812 SRP68Q9UHB9 627 aaKnown RBP12.63□□□□□ -0.39
GGPS1-204ENST00000471812 CEMIPQ8WUJ3 1361 aa12.63□□□□□ -0.39
GGPS1-204ENST00000471812 CNTNAP4Q9C0A0 1308 aa12.62□□□□□ -0.39
GGPS1-204ENST00000471812 GOLGB1Q14789 3259 aaKnown RBP12.62□□□□□ -0.39
GGPS1-204ENST00000471812 PRAMEF22A3QJZ6 481 aa12.62□□□□□ -0.39
GGPS1-204ENST00000471812 GNAT3A8MTJ3 354 aa12.62□□□□□ -0.39
GGPS1-204ENST00000471812 GAS2L2Q8NHY3 880 aa12.62□□□□□ -0.39
GGPS1-204ENST00000471812 ZNF496Q96IT1 587 aaPredicted RBP12.62□□□□□ -0.39
GGPS1-204ENST00000471812 SSFA2P28290 1259 aa12.61□□□□□ -0.39
GGPS1-204ENST00000471812 MNX1P50219 401 aaPredicted RBP12.61□□□□□ -0.39
GGPS1-204ENST00000471812 CCDC184Q52MB2 194 aa12.61□□□□□ -0.39
GGPS1-204ENST00000471812 ARHGEF1Q92888 912 aaKnown RBP12.61□□□□□ -0.39
GGPS1-204ENST00000471812 WWC3Q9ULE0 1092 aa12.61□□□□□ -0.39
GGPS1-204ENST00000471812 NUDCQ9Y266 331 aa12.61□□□□□ -0.39
GGPS1-204ENST00000471812 N4BP2Q86UW6 1770 aaPredicted RBP12.61□□□□□ -0.39
GGPS1-204ENST00000471812 RPS6KA4O75676 772 aa12.6□□□□□ -0.39
GGPS1-204ENST00000471812 GABBR2O75899 941 aa12.6□□□□□ -0.39
GGPS1-204ENST00000471812 FCHSD2O94868 740 aa12.6□□□□□ -0.39
GGPS1-204ENST00000471812 CYP19A1P11511 503 aaPredicted RBP12.6□□□□□ -0.39
GGPS1-204ENST00000471812 MIS18AQ9NYP9 233 aa12.6□□□□□ -0.39
GGPS1-204ENST00000471812 ZBTB1Q9Y2K1 713 aa12.6□□□□□ -0.39
GGPS1-204ENST00000471812 KDM3BQ7LBC6 1761 aa12.6□□□□□ -0.39
GGPS1-204ENST00000471812 PIP4K2AP48426 406 aaPredicted RBP12.59□□□□□ -0.39
GGPS1-204ENST00000471812 RALBP1Q15311 655 aa12.59□□□□□ -0.39
GGPS1-204ENST00000471812 RC3H1Q5TC82 1133 aaKnown RBP12.59□□□□□ -0.39
GGPS1-204ENST00000471812 CCDC146Q8IYE0 955 aa12.59□□□□□ -0.39
GGPS1-204ENST00000471812 RTCBQ9Y3I0 505 aaKnown RBP12.59□□□□□ -0.39
GGPS1-204ENST00000471812 AFDNP55196 1824 aaKnown RBP12.59□□□□□ -0.39
GGPS1-204ENST00000471812 MYBBP1AQ9BQG0 1328 aaKnown RBP12.59□□□□□ -0.39
GGPS1-204ENST00000471812 KIF13BQ9NQT8 1826 aa12.58□□□□□ -0.4
GGPS1-204ENST00000471812 SENP3-EIF4A1A0A087X0R7 540 aa12.58□□□□□ -0.4
GGPS1-204ENST00000471812 GYS1P13807 737 aa12.58□□□□□ -0.4
GGPS1-204ENST00000471812 POLD1P28340 1107 aa12.58□□□□□ -0.4
GGPS1-204ENST00000471812 ZNF790Q6PG37 636 aa12.58□□□□□ -0.4
GGPS1-204ENST00000471812 BBXQ8WY36 941 aaPredicted RBP12.58□□□□□ -0.4
GGPS1-204ENST00000471812 PRKRIP1Q9H875 184 aaPredicted RBP12.58□□□□□ -0.4
GGPS1-204ENST00000471812 SOS1Q07889 1333 aaPredicted RBP12.58□□□□□ -0.4
GGPS1-204ENST00000471812 HEG1Q9ULI3 1381 aa12.57□□□□□ -0.4
GGPS1-204ENST00000471812 MMP10P09238 476 aa12.57□□□□□ -0.4
GGPS1-204ENST00000471812 YBX3P16989 372 aaKnown RBP eCLIP12.57□□□□□ -0.42e-7■■□□□ 13
GGPS1-204ENST00000471812 TEFQ10587 303 aa12.57□□□□□ -0.4
GGPS1-204ENST00000471812 TRAPPC3LQ5T215 181 aa12.57□□□□□ -0.4
GGPS1-204ENST00000471812 FLAD1Q8NFF5 587 aa12.57□□□□□ -0.4
GGPS1-204ENST00000471812 CCDC87Q9NVE4 849 aa12.57□□□□□ -0.4
GGPS1-204ENST00000471812 RRP7AQ9Y3A4 280 aaKnown RBP12.57□□□□□ -0.4
GGPS1-204ENST00000471812 CHD4Q14839 1912 aa12.56□□□□□ -0.4
GGPS1-204ENST00000471812 DDR1Q08345 913 aa12.56□□□□□ -0.4
GGPS1-204ENST00000471812 BCL2L12Q9HB09 334 aa12.56□□□□□ -0.4
GGPS1-204ENST00000471812 BTBD11A6QL63 1104 aa12.55□□□□□ -0.4
GGPS1-204ENST00000471812 A1BGP04217 495 aa12.55□□□□□ -0.4
GGPS1-204ENST00000471812 CANXP27824 592 aaKnown RBP12.55□□□□□ -0.4
GGPS1-204ENST00000471812 NFE2L2Q16236 605 aa12.55□□□□□ -0.4
GGPS1-204ENST00000471812 FARP1Q9Y4F1 1045 aaPredicted RBP12.55□□□□□ -0.4
GGPS1-204ENST00000471812 USP16Q9Y5T5 823 aa12.55□□□□□ -0.4
GGPS1-204ENST00000471812 USP42Q9H9J4 1324 aaKnown RBP12.55□□□□□ -0.4
GGPS1-204ENST00000471812 BRCA1P38398 1863 aaKnown RBP12.55□□□□□ -0.4
GGPS1-204ENST00000471812 COL15A1P39059 1388 aa12.55□□□□□ -0.4
GGPS1-204ENST00000471812 SCN7AQ01118 1682 aa12.54□□□□□ -0.4
GGPS1-204ENST00000471812 LAMB4A4D0S4 1761 aa12.54□□□□□ -0.4
GGPS1-204ENST00000471812 USPL1Q5W0Q7 1092 aa12.54□□□□□ -0.4
GGPS1-204ENST00000471812 PELP1Q8IZL8 1130 aaKnown RBP12.54□□□□□ -0.4
GGPS1-204ENST00000471812 BCORQ6W2J9 1755 aa12.53□□□□□ -0.4
GGPS1-204ENST00000471812 RFC4P35249 363 aa12.53□□□□□ -0.4
GGPS1-204ENST00000471812 ZEB1P37275 1124 aaPredicted RBP12.53□□□□□ -0.4
GGPS1-204ENST00000471812 TTC5Q8N0Z6 440 aa12.53□□□□□ -0.4
GGPS1-204ENST00000471812 RNF25Q96BH1 459 aaPredicted RBP12.53□□□□□ -0.4
GGPS1-204ENST00000471812 ADAMTS8Q9UP79 889 aa12.53□□□□□ -0.4
GGPS1-204ENST00000471812 C10orf71Q711Q0 1435 aa12.53□□□□□ -0.4
GGPS1-204ENST00000471812 ANKRD31Q8N7Z5 1873 aa12.53□□□□□ -0.4
GGPS1-204ENST00000471812 PXDNLA1KZ92 1463 aa12.53□□□□□ -0.4
GGPS1-204ENST00000471812 NRXN2Q9P2S2 1712 aa12.52□□□□□ -0.41
GGPS1-204ENST00000471812 ZNF316A6NFI3 1004 aaPredicted RBP12.52□□□□□ -0.41
GGPS1-204ENST00000471812 VSIG10Q8N0Z9 540 aa12.52□□□□□ -0.41
GGPS1-204ENST00000471812 NBPF26B4DH59 902 aa12.51□□□□□ -0.41
GGPS1-204ENST00000471812 CD44P16070 742 aaKnown RBP12.51□□□□□ -0.41
GGPS1-204ENST00000471812 TMPOP42166 694 aaKnown RBP12.51□□□□□ -0.41
GGPS1-204ENST00000471812 EIF5P55010 431 aaKnown RBP12.51□□□□□ -0.41
GGPS1-204ENST00000471812 NEUROD2Q15784 382 aa12.51□□□□□ -0.41
GGPS1-204ENST00000471812 NBPF10Q6P3W6 841 aaKnown RBP12.51□□□□□ -0.41
GGPS1-204ENST00000471812 NBPF15Q8N660 670 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms