RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 NLRP8Q86W28 1048 aa6.92□□□□□ -1.3
COPS3-206ENST00000471414 TPCN2Q8NHX9 752 aa6.92□□□□□ -1.3
COPS3-206ENST00000471414 ACDQ96AP0 544 aa6.92□□□□□ -1.3
COPS3-206ENST00000471414 ATXN7L1Q9ULK2 861 aaPredicted RBP6.92□□□□□ -1.3
COPS3-206ENST00000471414 ADAMTS8Q9UP79 889 aa6.92□□□□□ -1.3
COPS3-206ENST00000471414 EML1O00423 815 aa6.91□□□□□ -1.3
COPS3-206ENST00000471414 BNIP3LO60238 219 aa6.91□□□□□ -1.3
COPS3-206ENST00000471414 CSB-PGBD3P0DP91 1061 aa6.91□□□□□ -1.3
COPS3-206ENST00000471414 HIRAP54198 1017 aaPredicted RBP6.91□□□□□ -1.3
COPS3-206ENST00000471414 PSME1Q06323 249 aa6.91□□□□□ -1.3
COPS3-206ENST00000471414 SLC9A9Q8IVB4 645 aa6.91□□□□□ -1.3
COPS3-206ENST00000471414 TNS4Q8IZW8 715 aa6.91□□□□□ -1.3
COPS3-206ENST00000471414 PGBD3Q8N328 593 aa6.91□□□□□ -1.3
COPS3-206ENST00000471414 SVOPQ8N4V2 548 aa6.91□□□□□ -1.3
COPS3-206ENST00000471414 CALR3Q96L12 384 aaKnown RBP6.91□□□□□ -1.3
COPS3-206ENST00000471414 MX2P20592 715 aa6.9□□□□□ -1.3
COPS3-206ENST00000471414 KCNMA1Q12791 1236 aa6.9□□□□□ -1.3
COPS3-206ENST00000471414 NBPF1Q3BBV0 1214 aa6.9□□□□□ -1.3
COPS3-206ENST00000471414 EFHC2Q5JST6 749 aa6.9□□□□□ -1.3
COPS3-206ENST00000471414 ZIC5Q96T25 663 aa6.9□□□□□ -1.3
COPS3-206ENST00000471414 CABP1Q9NZU7 370 aa6.9□□□□□ -1.3
COPS3-206ENST00000471414 C2CD2LO14523 706 aa6.89□□□□□ -1.31
COPS3-206ENST00000471414 NOS2P35228 1153 aa6.89□□□□□ -1.31
COPS3-206ENST00000471414 TXLNAP40222 546 aa6.89□□□□□ -1.31
COPS3-206ENST00000471414 PTK7Q13308 1070 aa6.89□□□□□ -1.31
COPS3-206ENST00000471414 CFAP70Q5T0N1 1121 aa6.89□□□□□ -1.31
COPS3-206ENST00000471414 FIGNL1Q6PIW4 674 aa6.89□□□□□ -1.31
COPS3-206ENST00000471414 L3MBTL2Q969R5 705 aa6.89□□□□□ -1.31
COPS3-206ENST00000471414 ABHD17AQ96GS6 310 aa6.89□□□□□ -1.31
COPS3-206ENST00000471414 ZCCHC2Q9C0B9 1178 aaKnown RBP6.89□□□□□ -1.31
COPS3-206ENST00000471414 PHF24Q9UPV7 400 aa6.89□□□□□ -1.31
COPS3-206ENST00000471414 A0A1W2PNR3 127 aa6.88□□□□□ -1.31
COPS3-206ENST00000471414 C21orf2O43822 256 aa6.88□□□□□ -1.31
COPS3-206ENST00000471414 BCRP11274 1271 aa6.88□□□□□ -1.31
COPS3-206ENST00000471414 MAP2K3P46734 347 aa6.88□□□□□ -1.31
COPS3-206ENST00000471414 CRTC2Q53ET0 693 aaPredicted RBP6.88□□□□□ -1.31
COPS3-206ENST00000471414 SAMD5Q5TGI4 173 aa6.88□□□□□ -1.31
COPS3-206ENST00000471414 TSPAN10Q9H1Z9 355 aaPredicted RBP6.88□□□□□ -1.31
COPS3-206ENST00000471414 PCDHGC4Q9Y5F7 938 aa6.88□□□□□ -1.31
COPS3-206ENST00000471414 GPC6Q9Y625 555 aaPredicted RBP6.88□□□□□ -1.31
COPS3-206ENST00000471414 PARP3Q9Y6F1 533 aa6.88□□□□□ -1.31
COPS3-206ENST00000471414 FAM196BA6NMK8 535 aa6.87□□□□□ -1.31
COPS3-206ENST00000471414 SFI1A8K8P3 1242 aa6.87□□□□□ -1.31
COPS3-206ENST00000471414 EFSO43281 561 aa6.87□□□□□ -1.31
COPS3-206ENST00000471414 FAM157BP0CG42 384 aa6.87□□□□□ -1.31
COPS3-206ENST00000471414 TATP17735 454 aaPredicted RBP6.87□□□□□ -1.31
COPS3-206ENST00000471414 RASA1P20936 1047 aa6.87□□□□□ -1.31
COPS3-206ENST00000471414 FGFR3P22607 806 aa6.87□□□□□ -1.31
COPS3-206ENST00000471414 PSMA6P60900 246 aaKnown RBP6.87□□□□□ -1.31
COPS3-206ENST00000471414 TNP2Q05952 138 aa6.87□□□□□ -1.31
COPS3-206ENST00000471414 TBCELQ5QJ74 424 aa6.87□□□□□ -1.31
COPS3-206ENST00000471414 FAM182BQ5T319 152 aa6.87□□□□□ -1.31
COPS3-206ENST00000471414 SH3PXD2AQ5TCZ1 1133 aa6.87□□□□□ -1.31
COPS3-206ENST00000471414 STAG2Q8N3U4 1231 aa6.87□□□□□ -1.31
COPS3-206ENST00000471414 TSEN2Q8NCE0 465 aaKnown RBP6.87□□□□□ -1.31
COPS3-206ENST00000471414 AIDAQ96BJ3 306 aa6.87□□□□□ -1.31
COPS3-206ENST00000471414 KLRG1Q96E93 195 aa6.87□□□□□ -1.31
COPS3-206ENST00000471414 ZNF594Q96JF6 807 aaPredicted RBP6.87□□□□□ -1.31
COPS3-206ENST00000471414 ARXQ96QS3 562 aa6.87□□□□□ -1.31
COPS3-206ENST00000471414 OXCT2Q9BYC2 517 aaPredicted RBP6.87□□□□□ -1.31
COPS3-206ENST00000471414 NSFL1CQ9UNZ2 370 aaKnown RBP6.87□□□□□ -1.31
COPS3-206ENST00000471414 OIP5O43482 229 aa6.86□□□□□ -1.31
COPS3-206ENST00000471414 CTBSQ01459 385 aa6.86□□□□□ -1.31
COPS3-206ENST00000471414 C1orf229Q6ZS94 237 aaPredicted RBP6.86□□□□□ -1.31
COPS3-206ENST00000471414 SERTM1A2A2V5 107 aa6.85□□□□□ -1.31
COPS3-206ENST00000471414 ATXN7O15265 892 aaPredicted RBP6.85□□□□□ -1.31
COPS3-206ENST00000471414 MAPTP10636 758 aaKnown RBP6.85□□□□□ -1.31
COPS3-206ENST00000471414 SEC13P55735 322 aa6.85□□□□□ -1.31
COPS3-206ENST00000471414 C1orf53Q5VUE5 145 aa6.85□□□□□ -1.31
COPS3-206ENST00000471414 ZNF777Q9ULD5 760 aaPredicted RBP6.85□□□□□ -1.31
COPS3-206ENST00000471414 USP17L15C9J2P7 530 aa6.84□□□□□ -1.31
COPS3-206ENST00000471414 USP17L10C9JJH3 530 aa6.84□□□□□ -1.31
COPS3-206ENST00000471414 USP17L13C9JLJ4 530 aa6.84□□□□□ -1.31
COPS3-206ENST00000471414 USP17L12C9JPN9 530 aa6.84□□□□□ -1.31
COPS3-206ENST00000471414 USP17L11C9JVI0 530 aa6.84□□□□□ -1.31
COPS3-206ENST00000471414 USP17L21D6R901 530 aa6.84□□□□□ -1.31
COPS3-206ENST00000471414 USP17L18D6R9N7 530 aa6.84□□□□□ -1.31
COPS3-206ENST00000471414 USP17L22D6RA61 530 aa6.84□□□□□ -1.31
COPS3-206ENST00000471414 USP17L17D6RBQ6 530 aa6.84□□□□□ -1.31
COPS3-206ENST00000471414 USP17L19D6RCP7 530 aa6.84□□□□□ -1.31
COPS3-206ENST00000471414 USP17L20D6RJB6 530 aa6.84□□□□□ -1.31
COPS3-206ENST00000471414 MAP3K10Q02779 954 aa6.84□□□□□ -1.31
COPS3-206ENST00000471414 USP17L24Q0WX57 530 aa6.84□□□□□ -1.31
COPS3-206ENST00000471414 ARSJQ5FYB0 599 aaPredicted RBP6.84□□□□□ -1.31
COPS3-206ENST00000471414 RNF225M0QZC1 329 aaPredicted RBP6.83□□□□□ -1.32
COPS3-206ENST00000471414 ARAFP10398 606 aa6.83□□□□□ -1.32
COPS3-206ENST00000471414 HOXB4P17483 251 aaPredicted RBP6.83□□□□□ -1.32
COPS3-206ENST00000471414 LMOD1P29536 600 aaPredicted RBP6.83□□□□□ -1.32
COPS3-206ENST00000471414 SRPK2P78362 688 aaKnown RBP6.83□□□□□ -1.32
COPS3-206ENST00000471414 LAMC2Q13753 1193 aa6.83□□□□□ -1.32
COPS3-206ENST00000471414 LARP1Q6PKG0 1096 aaKnown RBP6.83□□□□□ -1.32
COPS3-206ENST00000471414 SLCO4C1Q6ZQN7 724 aa6.83□□□□□ -1.32
COPS3-206ENST00000471414 GAS2L2Q8NHY3 880 aa6.83□□□□□ -1.32
COPS3-206ENST00000471414 C2orf49Q9BVC5 232 aaPredicted RBP6.83□□□□□ -1.32
COPS3-206ENST00000471414 VRTNQ9H8Y1 702 aa6.83□□□□□ -1.32
COPS3-206ENST00000471414 ENAMQ9NRM1 1142 aa6.83□□□□□ -1.32
COPS3-206ENST00000471414 GDF2Q9UK05 429 aaPredicted RBP6.83□□□□□ -1.32
COPS3-206ENST00000471414 DCDC2BA2VCK2 349 aa6.82□□□□□ -1.32
COPS3-206ENST00000471414 SHISA8B8ZZ34 492 aa6.82□□□□□ -1.32
COPS3-206ENST00000471414 BMP4P12644 408 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms