RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 CNTNAP4Q9C0A0 1308 aa10.16□□□□□ -0.78
TRIM59-204ENST00000471396 DLG5Q8TDM6 1919 aa10.16□□□□□ -0.78
TRIM59-204ENST00000471396 C19orf67A6NJJ6 358 aa10.16□□□□□ -0.78
TRIM59-204ENST00000471396 HTATSF1O43719 755 aaKnown RBP10.16□□□□□ -0.78
TRIM59-204ENST00000471396 PTCD1O75127 700 aaKnown RBP10.16□□□□□ -0.78
TRIM59-204ENST00000471396 FLAD1Q8NFF5 587 aa10.16□□□□□ -0.78
TRIM59-204ENST00000471396 SLC16A10Q8TF71 515 aa10.16□□□□□ -0.78
TRIM59-204ENST00000471396 RTF1Q92541 710 aaKnown RBP10.16□□□□□ -0.78
TRIM59-204ENST00000471396 PLEKHF1Q96S99 279 aa10.16□□□□□ -0.78
TRIM59-204ENST00000471396 COL24A1Q17RW2 1714 aa10.16□□□□□ -0.78
TRIM59-204ENST00000471396 GNPATO15228 680 aa10.15□□□□□ -0.78
TRIM59-204ENST00000471396 PTGER2P43116 358 aa10.15□□□□□ -0.78
TRIM59-204ENST00000471396 SLC39A6Q13433 755 aa10.15□□□□□ -0.78
TRIM59-204ENST00000471396 WDR43Q15061 677 aaKnown RBP eCLIP10.15□□□□□ -0.78
TRIM59-204ENST00000471396 COL23A1Q86Y22 540 aaPredicted RBP10.15□□□□□ -0.78
TRIM59-204ENST00000471396 MYH14Q7Z406 1995 aaKnown RBP10.15□□□□□ -0.78
TRIM59-204ENST00000471396 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.14□□□□□ -0.79
TRIM59-204ENST00000471396 PHF14O94880 888 aa10.14□□□□□ -0.79
TRIM59-204ENST00000471396 SSFA2P28290 1259 aa10.14□□□□□ -0.79
TRIM59-204ENST00000471396 NFE2L2Q16236 605 aa10.14□□□□□ -0.79
TRIM59-204ENST00000471396 DCAF8Q5TAQ9 597 aa10.14□□□□□ -0.79
TRIM59-204ENST00000471396 AMIGO3Q86WK7 504 aa10.14□□□□□ -0.79
TRIM59-204ENST00000471396 TTC5Q8N0Z6 440 aa10.14□□□□□ -0.79
TRIM59-204ENST00000471396 PPP1R1BQ9UD71 204 aaPredicted RBP10.14□□□□□ -0.79
TRIM59-204ENST00000471396 GSE1Q14687 1217 aa10.13□□□□□ -0.79
TRIM59-204ENST00000471396 RC3H1Q5TC82 1133 aaKnown RBP10.13□□□□□ -0.79
TRIM59-204ENST00000471396 MCM10Q7L590 875 aa10.13□□□□□ -0.79
TRIM59-204ENST00000471396 SGIP1Q9BQI5 828 aa10.13□□□□□ -0.79
TRIM59-204ENST00000471396 RGL2O15211 777 aa10.12□□□□□ -0.79
TRIM59-204ENST00000471396 ANP32CO43423 234 aa10.12□□□□□ -0.79
TRIM59-204ENST00000471396 POLD1P28340 1107 aa10.12□□□□□ -0.79
TRIM59-204ENST00000471396 CRKLP46109 303 aaKnown RBP10.12□□□□□ -0.79
TRIM59-204ENST00000471396 DCTN1Q14203 1278 aa10.12□□□□□ -0.79
TRIM59-204ENST00000471396 ZNF790Q6PG37 636 aa10.12□□□□□ -0.79
TRIM59-204ENST00000471396 DNAJC10Q8IXB1 793 aa10.12□□□□□ -0.79
TRIM59-204ENST00000471396 RASEFQ8IZ41 740 aa10.12□□□□□ -0.79
TRIM59-204ENST00000471396 VSIG10Q8N0Z9 540 aa10.12□□□□□ -0.79
TRIM59-204ENST00000471396 SP7Q8TDD2 431 aaPredicted RBP10.12□□□□□ -0.79
TRIM59-204ENST00000471396 RTCBQ9Y3I0 505 aaKnown RBP10.12□□□□□ -0.79
TRIM59-204ENST00000471396 FARP1Q9Y4F1 1045 aaPredicted RBP10.12□□□□□ -0.79
TRIM59-204ENST00000471396 HEG1Q9ULI3 1381 aa10.12□□□□□ -0.79
TRIM59-204ENST00000471396 C4AP0C0L4 1744 aa10.11□□□□□ -0.79
TRIM59-204ENST00000471396 BTBD11A6QL63 1104 aa10.11□□□□□ -0.79
TRIM59-204ENST00000471396 HAX1O00165 279 aa10.11□□□□□ -0.79
TRIM59-204ENST00000471396 RPS6KA4O75676 772 aa10.11□□□□□ -0.79
TRIM59-204ENST00000471396 SMIM5Q71RC9 77 aa10.11□□□□□ -0.79
TRIM59-204ENST00000471396 CCDC146Q8IYE0 955 aa10.11□□□□□ -0.79
TRIM59-204ENST00000471396 ZNF496Q96IT1 587 aaPredicted RBP10.11□□□□□ -0.79
TRIM59-204ENST00000471396 FMNL2Q96PY5 1086 aa10.11□□□□□ -0.79
TRIM59-204ENST00000471396 CYP19A1P11511 503 aaPredicted RBP10.1□□□□□ -0.79
TRIM59-204ENST00000471396 TMPOP42166 694 aaKnown RBP10.1□□□□□ -0.79
TRIM59-204ENST00000471396 LMOD3Q0VAK6 560 aa10.1□□□□□ -0.79
TRIM59-204ENST00000471396 MSL1Q68DK7 614 aa10.1□□□□□ -0.79
TRIM59-204ENST00000471396 INTS5Q6P9B9 1019 aaKnown RBP10.1□□□□□ -0.79
TRIM59-204ENST00000471396 RUNDC1Q96C34 613 aa10.1□□□□□ -0.79
TRIM59-204ENST00000471396 FAM212AQ96EL1 285 aa10.1□□□□□ -0.79
TRIM59-204ENST00000471396 ARXQ96QS3 562 aa10.1□□□□□ -0.79
TRIM59-204ENST00000471396 CCDC87Q9NVE4 849 aa10.1□□□□□ -0.79
TRIM59-204ENST00000471396 ADAMTS8Q9UP79 889 aa10.1□□□□□ -0.79
TRIM59-204ENST00000471396 KDM3BQ7LBC6 1761 aa10.1□□□□□ -0.79
TRIM59-204ENST00000471396 KCNQ3O43525 872 aa10.09□□□□□ -0.79
TRIM59-204ENST00000471396 STARD3NLO95772 234 aa10.09□□□□□ -0.79
TRIM59-204ENST00000471396 RIPK4P57078 832 aa10.09□□□□□ -0.79
TRIM59-204ENST00000471396 TAF7Q15545 349 aaPredicted RBP10.09□□□□□ -0.79
TRIM59-204ENST00000471396 TRAPPC3LQ5T215 181 aa10.09□□□□□ -0.79
TRIM59-204ENST00000471396 PNISRQ8TF01 805 aaKnown RBP10.09□□□□□ -0.79
TRIM59-204ENST00000471396 THUMPD2Q9BTF0 503 aaKnown RBP10.09□□□□□ -0.79
TRIM59-204ENST00000471396 SOS1Q07889 1333 aaPredicted RBP10.08□□□□□ -0.8
TRIM59-204ENST00000471396 CCDC184Q52MB2 194 aa10.08□□□□□ -0.8
TRIM59-204ENST00000471396 ARHGEF1Q92888 912 aaKnown RBP10.08□□□□□ -0.8
TRIM59-204ENST00000471396 TEX13AQ9BXU3 409 aaPredicted RBP10.08□□□□□ -0.8
TRIM59-204ENST00000471396 ZBTB1Q9Y2K1 713 aa10.08□□□□□ -0.8
TRIM59-204ENST00000471396 RRP7AQ9Y3A4 280 aaKnown RBP10.08□□□□□ -0.8
TRIM59-204ENST00000471396 LAMB4A4D0S4 1761 aa10.07□□□□□ -0.8
TRIM59-204ENST00000471396 COL15A1P39059 1388 aa10.07□□□□□ -0.8
TRIM59-204ENST00000471396 RFC4P35249 363 aa10.07□□□□□ -0.8
TRIM59-204ENST00000471396 FHDC1Q9C0D6 1143 aaPredicted RBP10.07□□□□□ -0.8
TRIM59-204ENST00000471396 MRS2Q9HD23 443 aa10.07□□□□□ -0.8
TRIM59-204ENST00000471396 USP42Q9H9J4 1324 aaKnown RBP10.07□□□□□ -0.8
TRIM59-204ENST00000471396 SNRPA1P09661 255 aaKnown RBP10.06□□□□□ -0.8
TRIM59-204ENST00000471396 GYS1P13807 737 aa10.05□□□□□ -0.8
TRIM59-204ENST00000471396 CANXP27824 592 aaKnown RBP10.05□□□□□ -0.8
TRIM59-204ENST00000471396 NEUROD2Q15784 382 aa10.05□□□□□ -0.8
TRIM59-204ENST00000471396 NLGN1Q8N2Q7 840 aa10.05□□□□□ -0.8
TRIM59-204ENST00000471396 SYT17Q9BSW7 474 aa10.05□□□□□ -0.8
TRIM59-204ENST00000471396 MIS18AQ9NYP9 233 aa10.05□□□□□ -0.8
TRIM59-204ENST00000471396 SRP68Q9UHB9 627 aaKnown RBP10.05□□□□□ -0.8
TRIM59-204ENST00000471396 TSPYL4Q9UJ04 414 aa10.05□□□□□ -0.8
TRIM59-204ENST00000471396 SCN7AQ01118 1682 aa10.05□□□□□ -0.8
TRIM59-204ENST00000471396 PRAMEF22A3QJZ6 481 aa10.04□□□□□ -0.8
TRIM59-204ENST00000471396 APAF1O14727 1248 aa10.04□□□□□ -0.8
TRIM59-204ENST00000471396 A1BGP04217 495 aa10.04□□□□□ -0.8
TRIM59-204ENST00000471396 MMP10P09238 476 aa10.04□□□□□ -0.8
TRIM59-204ENST00000471396 IL6STP40189 918 aaPredicted RBP10.04□□□□□ -0.8
TRIM59-204ENST00000471396 EIF5P55010 431 aaKnown RBP10.04□□□□□ -0.8
TRIM59-204ENST00000471396 EIF4A1P60842 406 aaKnown RBP10.04□□□□□ -0.8
TRIM59-204ENST00000471396 BABAM1Q9NWV8 329 aa10.04□□□□□ -0.8
TRIM59-204ENST00000471396 NARFQ9UHQ1 456 aa10.04□□□□□ -0.8
TRIM59-204ENST00000471396 TRIM35Q9UPQ4 493 aa10.04□□□□□ -0.8
TRIM59-204ENST00000471396 A0A087WZG4 1122 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms