RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 TEAD4Q15561 434 aa11.61□□□□□ -0.55
CCDC39-202ENST00000471307 SLC9A9Q8IVB4 645 aa11.61□□□□□ -0.55
CCDC39-202ENST00000471307 RUBCNLQ9H714 662 aa11.61□□□□□ -0.55
CCDC39-202ENST00000471307 GPR25O00155 361 aa11.6□□□□□ -0.55
CCDC39-202ENST00000471307 THBS1P07996 1170 aa11.6□□□□□ -0.55
CCDC39-202ENST00000471307 TNS4Q8IZW8 715 aa11.6□□□□□ -0.55
CCDC39-202ENST00000471307 AIDAQ96BJ3 306 aa11.6□□□□□ -0.55
CCDC39-202ENST00000471307 VRTNQ9H8Y1 702 aa11.6□□□□□ -0.55
CCDC39-202ENST00000471307 UBAP2LQ14157 1087 aaKnown RBP11.59□□□□□ -0.55
CCDC39-202ENST00000471307 CFAP70Q5T0N1 1121 aa11.59□□□□□ -0.55
CCDC39-202ENST00000471307 FIGNL1Q6PIW4 674 aa11.59□□□□□ -0.55
CCDC39-202ENST00000471307 NLRP8Q86W28 1048 aa11.59□□□□□ -0.55
CCDC39-202ENST00000471307 NSFL1CQ9UNZ2 370 aaKnown RBP11.59□□□□□ -0.55
CCDC39-202ENST00000471307 ADAMTS2O95450 1211 aa11.58□□□□□ -0.56
CCDC39-202ENST00000471307 SEC13P55735 322 aa11.58□□□□□ -0.56
CCDC39-202ENST00000471307 PTK7Q13308 1070 aa11.58□□□□□ -0.56
CCDC39-202ENST00000471307 CHMP3Q9Y3E7 222 aa11.58□□□□□ -0.56
CCDC39-202ENST00000471307 NOS2P35228 1153 aa11.57□□□□□ -0.56
CCDC39-202ENST00000471307 PSMA6P60900 246 aaKnown RBP11.57□□□□□ -0.56
CCDC39-202ENST00000471307 L3MBTL2Q969R5 705 aa11.57□□□□□ -0.56
CCDC39-202ENST00000471307 ATXN7L1Q9ULK2 861 aaPredicted RBP11.57□□□□□ -0.56
CCDC39-202ENST00000471307 GPC6Q9Y625 555 aaPredicted RBP11.57□□□□□ -0.56
CCDC39-202ENST00000471307 USP17L15C9J2P7 530 aa11.56□□□□□ -0.56
CCDC39-202ENST00000471307 USP17L10C9JJH3 530 aa11.56□□□□□ -0.56
CCDC39-202ENST00000471307 USP17L13C9JLJ4 530 aa11.56□□□□□ -0.56
CCDC39-202ENST00000471307 USP17L12C9JPN9 530 aa11.56□□□□□ -0.56
CCDC39-202ENST00000471307 USP17L11C9JVI0 530 aa11.56□□□□□ -0.56
CCDC39-202ENST00000471307 USP17L21D6R901 530 aa11.56□□□□□ -0.56
CCDC39-202ENST00000471307 USP17L18D6R9N7 530 aa11.56□□□□□ -0.56
CCDC39-202ENST00000471307 USP17L22D6RA61 530 aa11.56□□□□□ -0.56
CCDC39-202ENST00000471307 USP17L17D6RBQ6 530 aa11.56□□□□□ -0.56
CCDC39-202ENST00000471307 USP17L19D6RCP7 530 aa11.56□□□□□ -0.56
CCDC39-202ENST00000471307 USP17L20D6RJB6 530 aa11.56□□□□□ -0.56
CCDC39-202ENST00000471307 MX2P20592 715 aa11.56□□□□□ -0.56
CCDC39-202ENST00000471307 HIRAP54198 1017 aaPredicted RBP11.56□□□□□ -0.56
CCDC39-202ENST00000471307 USP17L24Q0WX57 530 aa11.56□□□□□ -0.56
CCDC39-202ENST00000471307 CRTC2Q53ET0 693 aaPredicted RBP11.56□□□□□ -0.56
CCDC39-202ENST00000471307 POTEAQ6S8J7 498 aa11.56□□□□□ -0.56
CCDC39-202ENST00000471307 ZDHHC1Q8WTX9 485 aa11.56□□□□□ -0.56
CCDC39-202ENST00000471307 SERTM1A2A2V5 107 aa11.55□□□□□ -0.56
CCDC39-202ENST00000471307 SFI1A8K8P3 1242 aa11.55□□□□□ -0.56
CCDC39-202ENST00000471307 TSEN2Q8NCE0 465 aaKnown RBP11.55□□□□□ -0.56
CCDC39-202ENST00000471307 GAS2L2Q8NHY3 880 aa11.55□□□□□ -0.56
CCDC39-202ENST00000471307 TSPAN10Q9H1Z9 355 aaPredicted RBP11.55□□□□□ -0.56
CCDC39-202ENST00000471307 NDFIP2Q9NV92 336 aa11.55□□□□□ -0.56
CCDC39-202ENST00000471307 IGF1RP08069 1367 aa11.54□□□□□ -0.56
CCDC39-202ENST00000471307 ARSJQ5FYB0 599 aaPredicted RBP11.54□□□□□ -0.56
CCDC39-202ENST00000471307 ZNF385CQ66K41 422 aaPredicted RBP11.54□□□□□ -0.56
CCDC39-202ENST00000471307 ANKMY2Q8IV38 441 aa11.54□□□□□ -0.56
CCDC39-202ENST00000471307 A0A1W2PNR3 127 aa11.53□□□□□ -0.56
CCDC39-202ENST00000471307 EML1O00423 815 aa11.53□□□□□ -0.56
CCDC39-202ENST00000471307 MAP2K3P46734 347 aa11.53□□□□□ -0.56
CCDC39-202ENST00000471307 STAG2Q8N3U4 1231 aa11.53□□□□□ -0.56
CCDC39-202ENST00000471307 SVOPQ8N4V2 548 aa11.53□□□□□ -0.56
CCDC39-202ENST00000471307 ZNF232Q9UNY5 417 aa11.53□□□□□ -0.56
CCDC39-202ENST00000471307 PCDHGC4Q9Y5F7 938 aa11.53□□□□□ -0.56
CCDC39-202ENST00000471307 PARP3Q9Y6F1 533 aa11.53□□□□□ -0.56
CCDC39-202ENST00000471307 DPYDQ12882 1025 aa11.52□□□□□ -0.57
CCDC39-202ENST00000471307 ZIC5Q96T25 663 aa11.52□□□□□ -0.57
CCDC39-202ENST00000471307 ZCCHC2Q9C0B9 1178 aaKnown RBP11.52□□□□□ -0.57
CCDC39-202ENST00000471307 LRRC4BQ9NT99 713 aa11.52□□□□□ -0.57
CCDC39-202ENST00000471307 TXLNAP40222 546 aa11.51□□□□□ -0.57
CCDC39-202ENST00000471307 TBCELQ5QJ74 424 aa11.51□□□□□ -0.57
CCDC39-202ENST00000471307 C1orf53Q5VUE5 145 aa11.51□□□□□ -0.57
CCDC39-202ENST00000471307 BNIP3LO60238 219 aa11.5□□□□□ -0.57
CCDC39-202ENST00000471307 SAMD5Q5TGI4 173 aa11.5□□□□□ -0.57
CCDC39-202ENST00000471307 BICDL1Q6ZP65 573 aa11.5□□□□□ -0.57
CCDC39-202ENST00000471307 ABHD17AQ96GS6 310 aa11.5□□□□□ -0.57
CCDC39-202ENST00000471307 ATXN7O15265 892 aaPredicted RBP11.49□□□□□ -0.57
CCDC39-202ENST00000471307 FGFR3P22607 806 aa11.49□□□□□ -0.57
CCDC39-202ENST00000471307 MAP3K10Q02779 954 aa11.49□□□□□ -0.57
CCDC39-202ENST00000471307 WHAMMQ8TF30 809 aa11.49□□□□□ -0.57
CCDC39-202ENST00000471307 ARXQ96QS3 562 aa11.49□□□□□ -0.57
CCDC39-202ENST00000471307 GJA3Q9Y6H8 435 aa11.49□□□□□ -0.57
CCDC39-202ENST00000471307 C21orf2O43822 256 aa11.48□□□□□ -0.57
CCDC39-202ENST00000471307 PPP1R12BO60237 982 aaPredicted RBP11.48□□□□□ -0.57
CCDC39-202ENST00000471307 FAM157BP0CG42 384 aa11.48□□□□□ -0.57
CCDC39-202ENST00000471307 LYPD4Q6UWN0 246 aa11.48□□□□□ -0.57
CCDC39-202ENST00000471307 ENAMQ9NRM1 1142 aa11.48□□□□□ -0.57
CCDC39-202ENST00000471307 ATAD2Q6PL18 1390 aa11.48□□□□□ -0.57
CCDC39-202ENST00000471307 ARHGEF15O94989 841 aa11.47□□□□□ -0.57
CCDC39-202ENST00000471307 CELA2BP08218 269 aaPredicted RBP11.47□□□□□ -0.57
CCDC39-202ENST00000471307 SERPINA10Q9UK55 444 aa11.47□□□□□ -0.57
CCDC39-202ENST00000471307 RFX1P22670 979 aa11.46□□□□□ -0.57
CCDC39-202ENST00000471307 IGFBP4P22692 258 aa11.46□□□□□ -0.57
CCDC39-202ENST00000471307 ELOAQ14241 798 aaKnown RBP11.46□□□□□ -0.57
CCDC39-202ENST00000471307 FAM182BQ5T319 152 aa11.46□□□□□ -0.57
CCDC39-202ENST00000471307 FAM200AQ8TCP9 573 aa11.46□□□□□ -0.57
CCDC39-202ENST00000471307 C7orf43Q8WVR3 580 aa11.46□□□□□ -0.57
CCDC39-202ENST00000471307 SCG3Q8WXD2 468 aaKnown RBP11.46□□□□□ -0.57
CCDC39-202ENST00000471307 CCDC97Q96F63 343 aaPredicted RBP11.46□□□□□ -0.57
CCDC39-202ENST00000471307 HINFPQ9BQA5 517 aa11.46□□□□□ -0.57
CCDC39-202ENST00000471307 C2orf49Q9BVC5 232 aaPredicted RBP11.46□□□□□ -0.57
CCDC39-202ENST00000471307 OXCT2Q9BYC2 517 aaPredicted RBP11.46□□□□□ -0.57
CCDC39-202ENST00000471307 BCRP11274 1271 aa11.45□□□□□ -0.58
CCDC39-202ENST00000471307 TNP2Q05952 138 aa11.45□□□□□ -0.58
CCDC39-202ENST00000471307 LAMC2Q13753 1193 aa11.45□□□□□ -0.58
CCDC39-202ENST00000471307 SH3PXD2AQ5TCZ1 1133 aa11.45□□□□□ -0.58
CCDC39-202ENST00000471307 RHPN1Q8TCX5 695 aa11.45□□□□□ -0.58
CCDC39-202ENST00000471307 ACDQ96AP0 544 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms