RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 ARHGEF28Q8N1W1 1705 aaKnown RBP8.23□□□□□ -1.09
SMNDC1-204ENST00000471297 ATAD2Q6PL18 1390 aa8.22□□□□□ -1.09
SMNDC1-204ENST00000471297 NINLQ9Y2I6 1382 aa8.22□□□□□ -1.09
SMNDC1-204ENST00000471297 NRXN3Q9Y4C0 1643 aa8.22□□□□□ -1.09
SMNDC1-204ENST00000471297 TECPR2O15040 1411 aa8.22□□□□□ -1.09
SMNDC1-204ENST00000471297 PPP1R18Q6NYC8 613 aa8.22□□□□□ -1.09
SMNDC1-204ENST00000471297 LYPD8Q6UX82 237 aa8.22□□□□□ -1.09
SMNDC1-204ENST00000471297 MRS2Q9HD23 443 aa8.22□□□□□ -1.09
SMNDC1-204ENST00000471297 SETD1BQ9UPS6 1966 aaKnown RBP8.22□□□□□ -1.09
SMNDC1-204ENST00000471297 PIK3R4Q99570 1358 aa8.22□□□□□ -1.09
SMNDC1-204ENST00000471297 SETD1AO15047 1707 aaKnown RBP8.21□□□□□ -1.09
SMNDC1-204ENST00000471297 PPEF1O14829 653 aaPredicted RBP8.21□□□□□ -1.1
SMNDC1-204ENST00000471297 DXOO77932 396 aaKnown RBP8.21□□□□□ -1.1
SMNDC1-204ENST00000471297 GGCXP38435 758 aa8.21□□□□□ -1.1
SMNDC1-204ENST00000471297 SRPK2P78362 688 aaKnown RBP8.21□□□□□ -1.1
SMNDC1-204ENST00000471297 SAFB2Q14151 953 aaKnown RBP eCLIP8.21□□□□□ -1.1
SMNDC1-204ENST00000471297 WAPLQ7Z5K2 1190 aa8.21□□□□□ -1.1
SMNDC1-204ENST00000471297 BANK1Q8NDB2 785 aa8.21□□□□□ -1.1
SMNDC1-204ENST00000471297 TMC1Q8TDI8 760 aa8.21□□□□□ -1.1
SMNDC1-204ENST00000471297 CDK19Q9BWU1 502 aa8.21□□□□□ -1.1
SMNDC1-204ENST00000471297 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.21□□□□□ -1.1
SMNDC1-204ENST00000471297 DIP2AQ14689 1571 aa8.21□□□□□ -1.1
SMNDC1-204ENST00000471297 PARD3Q8TEW0 1356 aa8.21□□□□□ -1.1
SMNDC1-204ENST00000471297 SLC26A8Q96RN1 970 aa8.2□□□□□ -1.1
SMNDC1-204ENST00000471297 SLC12A5Q9H2X9 1139 aa8.2□□□□□ -1.1
SMNDC1-204ENST00000471297 AMOTL2Q9Y2J4 779 aa8.2□□□□□ -1.1
SMNDC1-204ENST00000471297 ZNF142P52746 1687 aaPredicted RBP8.2□□□□□ -1.1
SMNDC1-204ENST00000471297 BRD4O60885 1362 aaPredicted RBP8.2□□□□□ -1.1
SMNDC1-204ENST00000471297 ANKRD36BQ8N2N9 1353 aa8.2□□□□□ -1.1
SMNDC1-204ENST00000471297 TULP4Q9NRJ4 1543 aa8.19□□□□□ -1.1
SMNDC1-204ENST00000471297 RNF223E7ERA6 249 aa8.19□□□□□ -1.1
SMNDC1-204ENST00000471297 WASLO00401 505 aaPredicted RBP8.19□□□□□ -1.1
SMNDC1-204ENST00000471297 CC2D1BQ5T0F9 858 aaKnown RBP8.19□□□□□ -1.1
SMNDC1-204ENST00000471297 NLRP13Q86W25 1043 aa8.19□□□□□ -1.1
SMNDC1-204ENST00000471297 CCDC24Q8N4L8 307 aa8.19□□□□□ -1.1
SMNDC1-204ENST00000471297 CARD14Q9BXL6 1004 aa8.19□□□□□ -1.1
SMNDC1-204ENST00000471297 TERF2IPQ9NYB0 399 aa8.19□□□□□ -1.1
SMNDC1-204ENST00000471297 KNDC1Q76NI1 1749 aa8.19□□□□□ -1.1
SMNDC1-204ENST00000471297 CPS1P31327 1500 aa8.19□□□□□ -1.1
SMNDC1-204ENST00000471297 CNGB1Q14028 1251 aaPredicted RBP8.18□□□□□ -1.1
SMNDC1-204ENST00000471297 PTPRNQ16849 979 aa8.18□□□□□ -1.1
SMNDC1-204ENST00000471297 CCDC184Q52MB2 194 aa8.18□□□□□ -1.1
SMNDC1-204ENST00000471297 HDGFL2Q7Z4V5 671 aaPredicted RBP8.18□□□□□ -1.1
SMNDC1-204ENST00000471297 LRRN4Q8WUT4 740 aa8.18□□□□□ -1.1
SMNDC1-204ENST00000471297 NUDT12Q9BQG2 462 aa8.18□□□□□ -1.1
SMNDC1-204ENST00000471297 SNRKQ9NRH2 765 aa8.18□□□□□ -1.1
SMNDC1-204ENST00000471297 EVA1BQ9NVM1 165 aa8.18□□□□□ -1.1
SMNDC1-204ENST00000471297 PLEKHH1Q9ULM0 1364 aa8.18□□□□□ -1.1
SMNDC1-204ENST00000471297 MYOM1P52179 1685 aa8.18□□□□□ -1.1
SMNDC1-204ENST00000471297 USP17L8P0C7I0 530 aa8.17□□□□□ -1.1
SMNDC1-204ENST00000471297 FCF1Q9Y324 198 aaKnown RBP8.17□□□□□ -1.1
SMNDC1-204ENST00000471297 CGNL1Q0VF96 1302 aa8.17□□□□□ -1.1
SMNDC1-204ENST00000471297 ROBO2Q9HCK4 1378 aa8.17□□□□□ -1.1
SMNDC1-204ENST00000471297 PTPRUQ92729 1446 aa8.17□□□□□ -1.1
SMNDC1-204ENST00000471297 NPHP4O75161 1426 aaPredicted RBP8.16□□□□□ -1.1
SMNDC1-204ENST00000471297 PTCH1Q13635 1447 aa8.16□□□□□ -1.1
SMNDC1-204ENST00000471297 ANKLE1Q8NAG6 615 aa8.16□□□□□ -1.1
SMNDC1-204ENST00000471297 PNISRQ8TF01 805 aaKnown RBP8.16□□□□□ -1.1
SMNDC1-204ENST00000471297 NSD3Q9BZ95 1437 aa8.15□□□□□ -1.1
SMNDC1-204ENST00000471297 NSD2O96028 1365 aa8.15□□□□□ -1.1
SMNDC1-204ENST00000471297 CCNYL3P0C7X3 344 aa8.15□□□□□ -1.1
SMNDC1-204ENST00000471297 PPP2R1AP30153 589 aa8.15□□□□□ -1.1
SMNDC1-204ENST00000471297 CTHP32929 405 aa8.15□□□□□ -1.1
SMNDC1-204ENST00000471297 FLIIQ13045 1269 aa8.15□□□□□ -1.1
SMNDC1-204ENST00000471297 FAM9BQ8IZU0 186 aa8.15□□□□□ -1.1
SMNDC1-204ENST00000471297 NUDT16Q96DE0 195 aaKnown RBP8.15□□□□□ -1.1
SMNDC1-204ENST00000471297 CABP1Q9NZU7 370 aa8.15□□□□□ -1.1
SMNDC1-204ENST00000471297 A0A0G2JS52 829 aa8.14□□□□□ -1.11
SMNDC1-204ENST00000471297 KCNA6P17658 529 aa8.14□□□□□ -1.11
SMNDC1-204ENST00000471297 KCNH2Q12809 1159 aa8.14□□□□□ -1.11
SMNDC1-204ENST00000471297 MORC1Q86VD1 984 aa8.14□□□□□ -1.11
SMNDC1-204ENST00000471297 ADGRB2O60241 1585 aa8.14□□□□□ -1.11
SMNDC1-204ENST00000471297 ATP7BP35670 1465 aa8.13□□□□□ -1.11
SMNDC1-204ENST00000471297 INSRP06213 1382 aa8.13□□□□□ -1.11
SMNDC1-204ENST00000471297 F12P00748 615 aaPredicted RBP8.13□□□□□ -1.11
SMNDC1-204ENST00000471297 NR6A1Q15406 480 aa8.13□□□□□ -1.11
SMNDC1-204ENST00000471297 PTCRAQ6ISU1 281 aaPredicted RBP8.13□□□□□ -1.11
SMNDC1-204ENST00000471297 HMX1Q9NP08 348 aaPredicted RBP8.13□□□□□ -1.11
SMNDC1-204ENST00000471297 USP32Q8NFA0 1604 aa8.13□□□□□ -1.11
SMNDC1-204ENST00000471297 A0A1W2PP64 1363 aa8.12□□□□□ -1.11
SMNDC1-204ENST00000471297 ZBTB24O43167 697 aaPredicted RBP8.12□□□□□ -1.11
SMNDC1-204ENST00000471297 HNRNPUQ00839 825 aaKnown RBP eCLIP8.12□□□□□ -1.11
SMNDC1-204ENST00000471297 PLA2G2CQ5R387 149 aa8.12□□□□□ -1.11
SMNDC1-204ENST00000471297 MTMR14Q8NCE2 650 aa8.12□□□□□ -1.11
SMNDC1-204ENST00000471297 EPS8L1Q8TE68 723 aa8.12□□□□□ -1.11
SMNDC1-204ENST00000471297 MAP10Q9P2G4 905 aa8.12□□□□□ -1.11
SMNDC1-204ENST00000471297 XRN1Q8IZH2 1706 aaKnown RBP8.12□□□□□ -1.11
SMNDC1-204ENST00000471297 PPIP5K1Q6PFW1 1433 aa8.12□□□□□ -1.11
SMNDC1-204ENST00000471297 MCM6Q14566 821 aa8.11□□□□□ -1.11
SMNDC1-204ENST00000471297 CD163L1Q9NR16 1453 aa8.11□□□□□ -1.11
SMNDC1-204ENST00000471297 CPSF1Q10570 1443 aaKnown RBP8.11□□□□□ -1.11
SMNDC1-204ENST00000471297 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.1□□□□□ -1.11
SMNDC1-204ENST00000471297 FYB1O15117 783 aa8.1□□□□□ -1.11
SMNDC1-204ENST00000471297 GJD4Q96KN9 370 aaPredicted RBP8.1□□□□□ -1.11
SMNDC1-204ENST00000471297 TRIM34Q9BYJ4 488 aa8.1□□□□□ -1.11
SMNDC1-204ENST00000471297 EDC4Q6P2E9 1401 aaKnown RBP8.1□□□□□ -1.11
SMNDC1-204ENST00000471297 ANKARQ7Z5J8 1434 aa8.1□□□□□ -1.11
SMNDC1-204ENST00000471297 CHD2O14647 1828 aaKnown RBP8.1□□□□□ -1.11
SMNDC1-204ENST00000471297 POLR3AO14802 1390 aaPredicted RBP8.1□□□□□ -1.11
SMNDC1-204ENST00000471297 ZBED9Q6R2W3 1325 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 174.7 ms