RNA–Protein interactions for RNA: ENST00000471042.1

LAMA5-207, Transcript of laminin subunit alpha 5, humanhuman

TSL 2

Gene LAMA5, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-207ENST00000471042 POLD1P28340 1107 aa18.41■□□□□ 0.54
LAMA5-207ENST00000471042 AMIGO3Q86WK7 504 aa18.41■□□□□ 0.54
LAMA5-207ENST00000471042 WDR63Q8IWG1 891 aa18.41■□□□□ 0.54
LAMA5-207ENST00000471042 VSIG10Q8N0Z9 540 aa18.41■□□□□ 0.54
LAMA5-207ENST00000471042 SLC4A9Q96Q91 983 aa18.41■□□□□ 0.54
LAMA5-207ENST00000471042 SYT17Q9BSW7 474 aa18.41■□□□□ 0.54
LAMA5-207ENST00000471042 HEG1Q9ULI3 1381 aa18.41■□□□□ 0.54
LAMA5-207ENST00000471042 HNRNPUQ00839 825 aaKnown RBP eCLIP18.4■□□□□ 0.54
LAMA5-207ENST00000471042 SSFA2P28290 1259 aa18.39■□□□□ 0.53
LAMA5-207ENST00000471042 EIF4A1P60842 406 aaKnown RBP18.39■□□□□ 0.53
LAMA5-207ENST00000471042 DNAJC10Q8IXB1 793 aa18.39■□□□□ 0.53
LAMA5-207ENST00000471042 TEX13AQ9BXU3 409 aaPredicted RBP18.39■□□□□ 0.53
LAMA5-207ENST00000471042 MBIPQ9NS73 344 aa18.39■□□□□ 0.53
LAMA5-207ENST00000471042 IL16Q14005 1332 aa18.39■□□□□ 0.53
LAMA5-207ENST00000471042 KDM3BQ7LBC6 1761 aa18.38■□□□□ 0.53
LAMA5-207ENST00000471042 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.38■□□□□ 0.53
LAMA5-207ENST00000471042 SNRPA1P09661 255 aaKnown RBP18.38■□□□□ 0.53
LAMA5-207ENST00000471042 ZNF853P0CG23 659 aa18.38■□□□□ 0.53
LAMA5-207ENST00000471042 GNPATO15228 680 aa18.37■□□□□ 0.53
LAMA5-207ENST00000471042 PHF14O94880 888 aa18.37■□□□□ 0.53
LAMA5-207ENST00000471042 CNTNAP4Q9C0A0 1308 aa18.37■□□□□ 0.53
LAMA5-207ENST00000471042 STARD3NLO95772 234 aa18.36■□□□□ 0.53
LAMA5-207ENST00000471042 MSL1Q68DK7 614 aa18.36■□□□□ 0.53
LAMA5-207ENST00000471042 KIF13BQ9NQT8 1826 aa18.35■□□□□ 0.53
LAMA5-207ENST00000471042 ZNF521Q96K83 1311 aa18.35■□□□□ 0.53
LAMA5-207ENST00000471042 DCAF8L1A6NGE4 600 aa18.35■□□□□ 0.53
LAMA5-207ENST00000471042 CRKLP46109 303 aaKnown RBP18.35■□□□□ 0.53
LAMA5-207ENST00000471042 GOLGA2Q08379 1002 aa18.35■□□□□ 0.53
LAMA5-207ENST00000471042 SMIM5Q71RC9 77 aa18.35■□□□□ 0.53
LAMA5-207ENST00000471042 TSR2Q969E8 191 aaKnown RBP18.35■□□□□ 0.53
LAMA5-207ENST00000471042 MYH16Q9H6N6 1097 aa18.35■□□□□ 0.53
LAMA5-207ENST00000471042 PRAMEF22A3QJZ6 481 aa18.34■□□□□ 0.53
LAMA5-207ENST00000471042 GIGYF1O75420 1035 aaPredicted RBP18.34■□□□□ 0.53
LAMA5-207ENST00000471042 CYP19A1P11511 503 aaPredicted RBP18.34■□□□□ 0.53
LAMA5-207ENST00000471042 RC3H1Q5TC82 1133 aaKnown RBP18.34■□□□□ 0.53
LAMA5-207ENST00000471042 CCDC87Q9NVE4 849 aa18.33■□□□□ 0.52
LAMA5-207ENST00000471042 USP16Q9Y5T5 823 aa18.33■□□□□ 0.52
LAMA5-207ENST00000471042 KRT24Q2M2I5 525 aa18.32■□□□□ 0.52
LAMA5-207ENST00000471042 RTCBQ9Y3I0 505 aaKnown RBP18.32■□□□□ 0.52
LAMA5-207ENST00000471042 FANCIQ9NVI1 1328 aa18.31■□□□□ 0.52
LAMA5-207ENST00000471042 E9PSI1 815 aa18.31■□□□□ 0.52
LAMA5-207ENST00000471042 ADRA2BP18089 450 aa18.31■□□□□ 0.52
LAMA5-207ENST00000471042 KLHL34Q8N239 644 aa18.31■□□□□ 0.52
LAMA5-207ENST00000471042 SPINK5Q9NQ38 1064 aaPredicted RBP18.31■□□□□ 0.52
LAMA5-207ENST00000471042 ELL2O00472 640 aaPredicted RBP18.3■□□□□ 0.52
LAMA5-207ENST00000471042 EIF2S2P20042 333 aaKnown RBP18.3■□□□□ 0.52
LAMA5-207ENST00000471042 CANXP27824 592 aaKnown RBP18.3■□□□□ 0.52
LAMA5-207ENST00000471042 DUSP27Q5VZP5 1158 aa18.3■□□□□ 0.52
LAMA5-207ENST00000471042 NPM2Q86SE8 214 aaKnown RBP18.3■□□□□ 0.52
LAMA5-207ENST00000471042 RPS6KA4O75676 772 aa18.29■□□□□ 0.52
LAMA5-207ENST00000471042 A1BGP04217 495 aa18.29■□□□□ 0.52
LAMA5-207ENST00000471042 TRAPPC3LQ5T215 181 aa18.29■□□□□ 0.52
LAMA5-207ENST00000471042 INTS5Q6P9B9 1019 aaKnown RBP18.29■□□□□ 0.52
LAMA5-207ENST00000471042 ZBTB1Q9Y2K1 713 aa18.29■□□□□ 0.52
LAMA5-207ENST00000471042 ZNF330Q9Y3S2 320 aaPredicted RBP18.29■□□□□ 0.52
LAMA5-207ENST00000471042 KIAA1551Q9HCM1 1747 aa18.29■□□□□ 0.52
LAMA5-207ENST00000471042 HOXB7P09629 217 aa18.28■□□□□ 0.52
LAMA5-207ENST00000471042 C8orf58Q8NAV2 365 aa18.28■□□□□ 0.52
LAMA5-207ENST00000471042 NLGN2Q8NFZ4 835 aa18.28■□□□□ 0.52
LAMA5-207ENST00000471042 NECTIN2Q92692 538 aa18.28■□□□□ 0.52
LAMA5-207ENST00000471042 SLFN5Q08AF3 891 aa18.27■□□□□ 0.52
LAMA5-207ENST00000471042 HDGFL1Q5TGJ6 251 aa18.27■□□□□ 0.52
LAMA5-207ENST00000471042 ARHGEF1Q92888 912 aaKnown RBP18.27■□□□□ 0.52
LAMA5-207ENST00000471042 CDCA7LQ96GN5 454 aa18.27■□□□□ 0.52
LAMA5-207ENST00000471042 LAMB4A4D0S4 1761 aa18.27■□□□□ 0.51
LAMA5-207ENST00000471042 ZBED9Q6R2W3 1325 aa18.26■□□□□ 0.51
LAMA5-207ENST00000471042 PIP4K2AP48426 406 aaPredicted RBP18.26■□□□□ 0.51
LAMA5-207ENST00000471042 EXOSC9Q06265 439 aaKnown RBP18.26■□□□□ 0.51
LAMA5-207ENST00000471042 CHMP4AQ9BY43 222 aa18.26■□□□□ 0.51
LAMA5-207ENST00000471042 CD2APQ9Y5K6 639 aa18.26■□□□□ 0.51
LAMA5-207ENST00000471042 N4BP2Q86UW6 1770 aaPredicted RBP18.26■□□□□ 0.51
LAMA5-207ENST00000471042 BRCA1P38398 1863 aaKnown RBP18.25■□□□□ 0.51
LAMA5-207ENST00000471042 TWISTNBQ3B726 338 aaPredicted RBP18.25■□□□□ 0.51
LAMA5-207ENST00000471042 TSPYL6Q8N831 410 aa18.25■□□□□ 0.51
LAMA5-207ENST00000471042 YTHDC1Q96MU7 727 aaKnown RBP18.25■□□□□ 0.51
LAMA5-207ENST00000471042 SOS1Q07889 1333 aaPredicted RBP18.24■□□□□ 0.51
LAMA5-207ENST00000471042 YY1P25490 414 aa18.24■□□□□ 0.51
LAMA5-207ENST00000471042 RFC4P35249 363 aa18.24■□□□□ 0.51
LAMA5-207ENST00000471042 IL6STP40189 918 aaPredicted RBP18.24■□□□□ 0.51
LAMA5-207ENST00000471042 ERBB4Q15303 1308 aa18.23■□□□□ 0.51
LAMA5-207ENST00000471042 AFDNP55196 1824 aaKnown RBP18.23■□□□□ 0.51
LAMA5-207ENST00000471042 COL15A1P39059 1388 aa18.23■□□□□ 0.51
LAMA5-207ENST00000471042 A0A087WZG4 1122 aa18.23■□□□□ 0.51
LAMA5-207ENST00000471042 GYS1P13807 737 aa18.23■□□□□ 0.51
LAMA5-207ENST00000471042 MYL6BP14649 208 aa18.23■□□□□ 0.51
LAMA5-207ENST00000471042 SCN7AQ01118 1682 aa18.22■□□□□ 0.51
LAMA5-207ENST00000471042 NBPF26B4DH59 902 aa18.22■□□□□ 0.51
LAMA5-207ENST00000471042 MMP10P09238 476 aa18.22■□□□□ 0.51
LAMA5-207ENST00000471042 EIF5P55010 431 aaKnown RBP18.22■□□□□ 0.51
LAMA5-207ENST00000471042 GPR162Q16538 588 aa18.22■□□□□ 0.51
LAMA5-207ENST00000471042 CCDC30Q5VVM6 783 aa18.22■□□□□ 0.51
LAMA5-207ENST00000471042 NBPF10Q6P3W6 841 aaKnown RBP18.22■□□□□ 0.51
LAMA5-207ENST00000471042 NLGN1Q8N2Q7 840 aa18.22■□□□□ 0.51
LAMA5-207ENST00000471042 NBPF15Q8N660 670 aa18.22■□□□□ 0.51
LAMA5-207ENST00000471042 USP42Q9H9J4 1324 aaKnown RBP18.22■□□□□ 0.51
LAMA5-207ENST00000471042 ZPR1O75312 459 aa18.21■□□□□ 0.51
LAMA5-207ENST00000471042 CHPF2Q9P2E5 772 aa18.21■□□□□ 0.51
LAMA5-207ENST00000471042 DBF4Q9UBU7 674 aaPredicted RBP18.21■□□□□ 0.51
LAMA5-207ENST00000471042 NRXN2Q9P2S2 1712 aa18.2■□□□□ 0.5
LAMA5-207ENST00000471042 UTRNP46939 3433 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms