RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 TRIM34Q9BYJ4 488 aa9.66□□□□□ -0.86
GPNMB-208ENST00000470994 UGGT2Q9NYU1 1516 aa9.66□□□□□ -0.86
GPNMB-208ENST00000470994 KDM5BQ9UGL1 1544 aa9.66□□□□□ -0.86
GPNMB-208ENST00000470994 ITGB2P05107 769 aa9.65□□□□□ -0.86
GPNMB-208ENST00000470994 FBXO45P0C2W1 286 aa9.65□□□□□ -0.86
GPNMB-208ENST00000470994 GDF2Q9UK05 429 aaPredicted RBP9.65□□□□□ -0.86
GPNMB-208ENST00000470994 GOLGA3Q08378 1498 aa9.65□□□□□ -0.87
GPNMB-208ENST00000470994 COL17A1Q9UMD9 1497 aaPredicted RBP9.65□□□□□ -0.87
GPNMB-208ENST00000470994 PIK3R2O00459 728 aa9.64□□□□□ -0.87
GPNMB-208ENST00000470994 GTF2E1P29083 439 aaPredicted RBP9.64□□□□□ -0.87
GPNMB-208ENST00000470994 ARHGEF10LQ9HCE6 1279 aa9.64□□□□□ -0.87
GPNMB-208ENST00000470994 CD109Q6YHK3 1445 aa9.64□□□□□ -0.87
GPNMB-208ENST00000470994 PCDHB11Q9Y5F2 797 aa9.63□□□□□ -0.87
GPNMB-208ENST00000470994 TEX14Q8IWB6 1497 aa9.63□□□□□ -0.87
GPNMB-208ENST00000470994 GLI2P10070 1586 aa9.63□□□□□ -0.87
GPNMB-208ENST00000470994 WDR7Q9Y4E6 1490 aa9.62□□□□□ -0.87
GPNMB-208ENST00000470994 LBRQ14739 615 aaKnown RBP9.62□□□□□ -0.87
GPNMB-208ENST00000470994 PCMTD1Q96MG8 357 aaPredicted RBP9.62□□□□□ -0.87
GPNMB-208ENST00000470994 RRAGCQ9HB90 399 aa9.62□□□□□ -0.87
GPNMB-208ENST00000470994 KIAA0556O60303 1618 aa9.61□□□□□ -0.87
GPNMB-208ENST00000470994 A0A1B0GTH6 734 aa9.61□□□□□ -0.87
GPNMB-208ENST00000470994 GNRH1P01148 92 aa9.61□□□□□ -0.87
GPNMB-208ENST00000470994 CSB-PGBD3P0DP91 1061 aa9.61□□□□□ -0.87
GPNMB-208ENST00000470994 PGBD3Q8N328 593 aa9.61□□□□□ -0.87
GPNMB-208ENST00000470994 GOLGA6L1Q8N7Z2 621 aa9.61□□□□□ -0.87
GPNMB-208ENST00000470994 GPAMQ9HCL2 828 aa9.61□□□□□ -0.87
GPNMB-208ENST00000470994 GOPCQ9HD26 462 aa9.61□□□□□ -0.87
GPNMB-208ENST00000470994 PRXQ9BXM0 1461 aa9.6□□□□□ -0.87
GPNMB-208ENST00000470994 TRAK2O60296 914 aa9.6□□□□□ -0.87
GPNMB-208ENST00000470994 BAG6P46379 1132 aa9.6□□□□□ -0.87
GPNMB-208ENST00000470994 NR1H3Q13133 447 aa9.6□□□□□ -0.87
GPNMB-208ENST00000470994 ADGRL1O94910 1474 aa9.59□□□□□ -0.87
GPNMB-208ENST00000470994 SCTRP47872 440 aa9.59□□□□□ -0.87
GPNMB-208ENST00000470994 SNRPNP63162 240 aaKnown RBP9.59□□□□□ -0.87
GPNMB-208ENST00000470994 GNASQ5JWF2 1037 aa9.59□□□□□ -0.87
GPNMB-208ENST00000470994 CNKSR1Q969H4 720 aa9.59□□□□□ -0.87
GPNMB-208ENST00000470994 KLRG1Q96E93 195 aa9.59□□□□□ -0.87
GPNMB-208ENST00000470994 ESYT1Q9BSJ8 1104 aa9.59□□□□□ -0.87
GPNMB-208ENST00000470994 OSBPL3Q9H4L5 887 aa9.59□□□□□ -0.87
GPNMB-208ENST00000470994 RAPGEF3O95398 923 aa9.58□□□□□ -0.88
GPNMB-208ENST00000470994 MYCP01106 439 aaPredicted RBP9.58□□□□□ -0.88
GPNMB-208ENST00000470994 AMPD1P23109 780 aa9.58□□□□□ -0.88
GPNMB-208ENST00000470994 EDARADDQ8WWZ3 215 aa9.58□□□□□ -0.88
GPNMB-208ENST00000470994 ZSCAN10Q96SZ4 725 aaPredicted RBP9.58□□□□□ -0.88
GPNMB-208ENST00000470994 ARID4BQ4LE39 1312 aaPredicted RBP9.57□□□□□ -0.88
GPNMB-208ENST00000470994 KRBA1A5PL33 1030 aa9.57□□□□□ -0.88
GPNMB-208ENST00000470994 PLEKHD1A6NEE1 506 aa9.57□□□□□ -0.88
GPNMB-208ENST00000470994 SHISA8B8ZZ34 492 aa9.57□□□□□ -0.88
GPNMB-208ENST00000470994 EFHC2Q5JST6 749 aa9.57□□□□□ -0.88
GPNMB-208ENST00000470994 RAB6BQ9NRW1 208 aa9.57□□□□□ -0.88
GPNMB-208ENST00000470994 ATXN7L1Q9ULK2 861 aaPredicted RBP9.57□□□□□ -0.88
GPNMB-208ENST00000470994 ZCCHC11Q5TAX3 1644 aaKnown RBP9.56□□□□□ -0.88
GPNMB-208ENST00000470994 ATP10BO94823 1461 aa9.56□□□□□ -0.88
GPNMB-208ENST00000470994 BMP4P12644 408 aa9.56□□□□□ -0.88
GPNMB-208ENST00000470994 CENPCQ03188 943 aa9.56□□□□□ -0.88
GPNMB-208ENST00000470994 TMEM214Q6NUQ4 689 aaKnown RBP9.56□□□□□ -0.88
GPNMB-208ENST00000470994 UBTFP17480 764 aaKnown RBP9.55□□□□□ -0.88
GPNMB-208ENST00000470994 GRIN2CQ14957 1233 aa9.55□□□□□ -0.88
GPNMB-208ENST00000470994 GJD4Q96KN9 370 aaPredicted RBP9.55□□□□□ -0.88
GPNMB-208ENST00000470994 APBB1O00213 710 aa9.54□□□□□ -0.88
GPNMB-208ENST00000470994 PHKA2P46019 1235 aa9.54□□□□□ -0.88
GPNMB-208ENST00000470994 ESCO1Q5FWF5 840 aa9.54□□□□□ -0.88
GPNMB-208ENST00000470994 SLCO4C1Q6ZQN7 724 aa9.54□□□□□ -0.88
GPNMB-208ENST00000470994 MAGI3Q5TCQ9 1506 aa9.54□□□□□ -0.88
GPNMB-208ENST00000470994 ABCA8O94911 1581 aa9.54□□□□□ -0.88
GPNMB-208ENST00000470994 GNB5O14775 395 aa9.53□□□□□ -0.88
GPNMB-208ENST00000470994 IL2RAP01589 272 aa9.53□□□□□ -0.88
GPNMB-208ENST00000470994 NOP53Q9NZM5 478 aaKnown RBP9.53□□□□□ -0.88
GPNMB-208ENST00000470994 PPRC1Q5VV67 1664 aaKnown RBP9.52□□□□□ -0.89
GPNMB-208ENST00000470994 FURINP09958 794 aa9.52□□□□□ -0.89
GPNMB-208ENST00000470994 COL8A1P27658 744 aa9.52□□□□□ -0.89
GPNMB-208ENST00000470994 MAP3K4Q9Y6R4 1608 aa9.52□□□□□ -0.89
GPNMB-208ENST00000470994 FHOD3Q2V2M9 1422 aa9.51□□□□□ -0.89
GPNMB-208ENST00000470994 THBS1P07996 1170 aa9.51□□□□□ -0.89
GPNMB-208ENST00000470994 C1orf229Q6ZS94 237 aaPredicted RBP9.51□□□□□ -0.89
GPNMB-208ENST00000470994 Q8N3U1 123 aa9.51□□□□□ -0.89
GPNMB-208ENST00000470994 RUBCNLQ9H714 662 aa9.51□□□□□ -0.89
GPNMB-208ENST00000470994 FGFR3P22607 806 aa9.5□□□□□ -0.89
GPNMB-208ENST00000470994 XAGE2Q96GT9 111 aa9.5□□□□□ -0.89
GPNMB-208ENST00000470994 GGA1Q9UJY5 639 aa9.5□□□□□ -0.89
GPNMB-208ENST00000470994 NDUFB9Q9Y6M9 179 aa9.5□□□□□ -0.89
GPNMB-208ENST00000470994 PHLDB1Q86UU1 1377 aa9.5□□□□□ -0.89
GPNMB-208ENST00000470994 SOCS7O14512 581 aa9.49□□□□□ -0.89
GPNMB-208ENST00000470994 MSX1P28360 303 aa9.49□□□□□ -0.89
GPNMB-208ENST00000470994 C4orf17Q53FE4 359 aa9.49□□□□□ -0.89
GPNMB-208ENST00000470994 FIGNL1Q6PIW4 674 aa9.49□□□□□ -0.89
GPNMB-208ENST00000470994 ABHD17AQ96GS6 310 aa9.49□□□□□ -0.89
GPNMB-208ENST00000470994 EEA1Q15075 1411 aa9.48□□□□□ -0.89
GPNMB-208ENST00000470994 UBAP2LQ14157 1087 aaKnown RBP9.48□□□□□ -0.89
GPNMB-208ENST00000470994 MLECQ14165 292 aa9.48□□□□□ -0.89
GPNMB-208ENST00000470994 RHBDD1Q8TEB9 315 aa9.48□□□□□ -0.89
GPNMB-208ENST00000470994 FHDC1Q9C0D6 1143 aaPredicted RBP9.48□□□□□ -0.89
GPNMB-208ENST00000470994 HRH3Q9Y5N1 445 aa9.48□□□□□ -0.89
GPNMB-208ENST00000470994 ARAFP10398 606 aa9.47□□□□□ -0.89
GPNMB-208ENST00000470994 EPXP11678 715 aa9.47□□□□□ -0.89
GPNMB-208ENST00000470994 LINC00114Q6XXX2 140 aa9.47□□□□□ -0.89
GPNMB-208ENST00000470994 BANK1Q8NDB2 785 aa9.47□□□□□ -0.89
GPNMB-208ENST00000470994 CRISPLD1Q9H336 500 aa9.47□□□□□ -0.89
GPNMB-208ENST00000470994 ARAP3Q8WWN8 1544 aa9.46□□□□□ -0.89
GPNMB-208ENST00000470994 CTTNBP2Q8WZ74 1663 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms