RNA–Protein interactions for RNA: ENST00000470494.5

CDH23-210, Transcript of cadherin related 23, humanhuman

TSL 3

Gene CDH23, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-210ENST00000470494 USP42Q9H9J4 1324 aaKnown RBP21.91■■□□□ 1.1
CDH23-210ENST00000470494 CANXP27824 592 aaKnown RBP21.91■■□□□ 1.1
CDH23-210ENST00000470494 WDR43Q15061 677 aaKnown RBP eCLIP21.91■■□□□ 1.1
CDH23-210ENST00000470494 PRKRIP1Q9H875 184 aaPredicted RBP21.91■■□□□ 1.1
CDH23-210ENST00000470494 ZNF330Q9Y3S2 320 aaPredicted RBP21.91■■□□□ 1.1
CDH23-210ENST00000470494 CD2APQ9Y5K6 639 aa21.91■■□□□ 1.1
CDH23-210ENST00000470494 ZPR1O75312 459 aa21.9■■□□□ 1.1
CDH23-210ENST00000470494 YY1P25490 414 aa21.9■■□□□ 1.1
CDH23-210ENST00000470494 UTRNP46939 3433 aa21.89■■□□□ 1.09
CDH23-210ENST00000470494 KIF13BQ9NQT8 1826 aa21.88■■□□□ 1.09
CDH23-210ENST00000470494 CCDC146Q8IYE0 955 aa21.88■■□□□ 1.09
CDH23-210ENST00000470494 TEX13AQ9BXU3 409 aaPredicted RBP21.88■■□□□ 1.09
CDH23-210ENST00000470494 PARP3Q9Y6F1 533 aa21.88■■□□□ 1.09
CDH23-210ENST00000470494 KDM3BQ7LBC6 1761 aa21.88■■□□□ 1.09
CDH23-210ENST00000470494 GOLGB1Q14789 3259 aaKnown RBP21.88■■□□□ 1.09
CDH23-210ENST00000470494 N4BP2Q86UW6 1770 aaPredicted RBP21.87■■□□□ 1.09
CDH23-210ENST00000470494 ZNF316A6NFI3 1004 aaPredicted RBP21.87■■□□□ 1.09
CDH23-210ENST00000470494 USPL1Q5W0Q7 1092 aa21.87■■□□□ 1.09
CDH23-210ENST00000470494 THUMPD2Q9BTF0 503 aaKnown RBP21.87■■□□□ 1.09
CDH23-210ENST00000470494 WWC3Q9ULE0 1092 aa21.87■■□□□ 1.09
CDH23-210ENST00000470494 FKBP8Q14318 412 aa21.86■■□□□ 1.09
CDH23-210ENST00000470494 TAF7Q15545 349 aaPredicted RBP21.86■■□□□ 1.09
CDH23-210ENST00000470494 MIS18AQ9NYP9 233 aa21.86■■□□□ 1.09
CDH23-210ENST00000470494 LAMB4A4D0S4 1761 aa21.86■■□□□ 1.09
CDH23-210ENST00000470494 NPM2Q86SE8 214 aaKnown RBP21.85■■□□□ 1.09
CDH23-210ENST00000470494 RIPK4P57078 832 aa21.84■■□□□ 1.09
CDH23-210ENST00000470494 SCN7AQ01118 1682 aa21.84■■□□□ 1.09
CDH23-210ENST00000470494 AFDNP55196 1824 aaKnown RBP21.83■■□□□ 1.09
CDH23-210ENST00000470494 NARFQ9UHQ1 456 aa21.83■■□□□ 1.09
CDH23-210ENST00000470494 RRP7AQ9Y3A4 280 aaKnown RBP21.83■■□□□ 1.09
CDH23-210ENST00000470494 C10orf71Q711Q0 1435 aa21.82■■□□□ 1.08
CDH23-210ENST00000470494 PRAMEF22A3QJZ6 481 aa21.82■■□□□ 1.08
CDH23-210ENST00000470494 A1BGP04217 495 aa21.82■■□□□ 1.08
CDH23-210ENST00000470494 SNRPA1P09661 255 aaKnown RBP21.82■■□□□ 1.08
CDH23-210ENST00000470494 YBX3P16989 372 aaKnown RBP eCLIP21.82■■□□□ 1.08
CDH23-210ENST00000470494 NEUROD2Q15784 382 aa21.82■■□□□ 1.08
CDH23-210ENST00000470494 KIAA1551Q9HCM1 1747 aa21.81■■□□□ 1.08
CDH23-210ENST00000470494 A0A087WZG4 1122 aa21.81■■□□□ 1.08
CDH23-210ENST00000470494 TMPOP42166 694 aaKnown RBP21.81■■□□□ 1.08
CDH23-210ENST00000470494 PIP4K2AP48426 406 aaPredicted RBP21.81■■□□□ 1.08
CDH23-210ENST00000470494 PNISRQ8TF01 805 aaKnown RBP21.81■■□□□ 1.08
CDH23-210ENST00000470494 USP16Q9Y5T5 823 aa21.81■■□□□ 1.08
CDH23-210ENST00000470494 EIF5P55010 431 aaKnown RBP21.8■■□□□ 1.08
CDH23-210ENST00000470494 DDR1Q08345 913 aa21.8■■□□□ 1.08
CDH23-210ENST00000470494 LMOD3Q0VAK6 560 aa21.8■■□□□ 1.08
CDH23-210ENST00000470494 BCORQ6W2J9 1755 aa21.79■■□□□ 1.08
CDH23-210ENST00000470494 PXDNLA1KZ92 1463 aa21.79■■□□□ 1.08
CDH23-210ENST00000470494 RUNDC1Q96C34 613 aa21.79■■□□□ 1.08
CDH23-210ENST00000470494 ADAMTS8Q9UP79 889 aa21.79■■□□□ 1.08
CDH23-210ENST00000470494 IL6STP40189 918 aaPredicted RBP21.78■■□□□ 1.08
CDH23-210ENST00000470494 TBC1D2BQ9UPU7 963 aa21.78■■□□□ 1.08
CDH23-210ENST00000470494 POLRMTO00411 1230 aaKnown RBP21.77■■□□□ 1.08
CDH23-210ENST00000470494 GRIN3BO60391 1043 aa21.77■■□□□ 1.08
CDH23-210ENST00000470494 NFIXQ14938 502 aa21.77■■□□□ 1.08
CDH23-210ENST00000470494 BICDL1Q6ZP65 573 aa21.77■■□□□ 1.08
CDH23-210ENST00000470494 TSPYL4Q9UJ04 414 aa21.77■■□□□ 1.08
CDH23-210ENST00000470494 A0A0G2JLW4 131 aa21.76■■□□□ 1.07
CDH23-210ENST00000470494 BRCA1P38398 1863 aaKnown RBP21.76■■□□□ 1.07
CDH23-210ENST00000470494 BCL2L12Q9HB09 334 aa21.76■■□□□ 1.07
CDH23-210ENST00000470494 TM4SF1P30408 202 aa21.74■■□□□ 1.07
CDH23-210ENST00000470494 TGFB2P61812 414 aa21.74■■□□□ 1.07
CDH23-210ENST00000470494 DZIP3Q86Y13 1208 aaKnown RBP21.74■■□□□ 1.07
CDH23-210ENST00000470494 NRXN2Q9P2S2 1712 aa21.74■■□□□ 1.07
CDH23-210ENST00000470494 ANP32CO43423 234 aa21.73■■□□□ 1.07
CDH23-210ENST00000470494 DPEP1P16444 411 aa21.73■■□□□ 1.07
CDH23-210ENST00000470494 EIF4A1P60842 406 aaKnown RBP21.73■■□□□ 1.07
CDH23-210ENST00000470494 LAS1LQ9Y4W2 734 aaKnown RBP21.72■■□□□ 1.07
CDH23-210ENST00000470494 GIGYF1O75420 1035 aaPredicted RBP21.71■■□□□ 1.07
CDH23-210ENST00000470494 SERPINB2P05120 415 aa21.71■■□□□ 1.07
CDH23-210ENST00000470494 TBC1D9BQ66K14 1250 aa21.71■■□□□ 1.07
CDH23-210ENST00000470494 BCS1LQ9Y276 419 aa21.71■■□□□ 1.07
CDH23-210ENST00000470494 NBPF26B4DH59 902 aa21.7■■□□□ 1.06
CDH23-210ENST00000470494 NPHP1O15259 732 aa21.7■■□□□ 1.06
CDH23-210ENST00000470494 CAMTA2O94983 1202 aa21.7■■□□□ 1.06
CDH23-210ENST00000470494 NBPF10Q6P3W6 841 aaKnown RBP21.7■■□□□ 1.06
CDH23-210ENST00000470494 NGEFQ8N5V2 710 aa21.7■■□□□ 1.06
CDH23-210ENST00000470494 NBPF15Q8N660 670 aa21.7■■□□□ 1.06
CDH23-210ENST00000470494 ARFGEF1Q9Y6D6 1849 aa21.69■■□□□ 1.06
CDH23-210ENST00000470494 CARMIL3Q8ND23 1372 aa21.69■■□□□ 1.06
CDH23-210ENST00000470494 CHRNA5P30532 468 aa21.68■■□□□ 1.06
CDH23-210ENST00000470494 CCDC184Q52MB2 194 aa21.68■■□□□ 1.06
CDH23-210ENST00000470494 TRIM35Q9UPQ4 493 aa21.68■■□□□ 1.06
CDH23-210ENST00000470494 ANKRD31Q8N7Z5 1873 aa21.68■■□□□ 1.06
CDH23-210ENST00000470494 DLEC1Q9Y238 1755 aa21.67■■□□□ 1.06
CDH23-210ENST00000470494 APAF1O14727 1248 aa21.67■■□□□ 1.06
CDH23-210ENST00000470494 MYL6BP14649 208 aa21.67■■□□□ 1.06
CDH23-210ENST00000470494 SETDB2Q96T68 719 aa21.67■■□□□ 1.06
CDH23-210ENST00000470494 ZNF652Q9Y2D9 606 aa21.67■■□□□ 1.06
CDH23-210ENST00000470494 NUP98P52948 1817 aa21.66■■□□□ 1.06
CDH23-210ENST00000470494 ZNF784Q8NCA9 323 aaPredicted RBP21.66■■□□□ 1.06
CDH23-210ENST00000470494 MRS2Q9HD23 443 aa21.66■■□□□ 1.06
CDH23-210ENST00000470494 EIF2S2P20042 333 aaKnown RBP21.65■■□□□ 1.06
CDH23-210ENST00000470494 BABAM1Q9NWV8 329 aa21.65■■□□□ 1.06
CDH23-210ENST00000470494 PIM2Q9P1W9 311 aa21.65■■□□□ 1.06
CDH23-210ENST00000470494 CACNA1SQ13698 1873 aa21.64■■□□□ 1.06
CDH23-210ENST00000470494 CCDC24Q8N4L8 307 aa21.64■■□□□ 1.05
CDH23-210ENST00000470494 DALRD3Q5D0E6 543 aaKnown RBP21.63■■□□□ 1.05
CDH23-210ENST00000470494 KIF6Q6ZMV9 814 aa21.63■■□□□ 1.05
CDH23-210ENST00000470494 CNBD1Q8NA66 436 aa21.63■■□□□ 1.05
CDH23-210ENST00000470494 COL11A2P13942 1736 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms