RNA–Protein interactions for RNA: ENST00000470280.1

LDHB-205, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-205ENST00000470280 RTF1Q92541 710 aaKnown RBP13.94□□□□□ -0.18
LDHB-205ENST00000470280 THUMPD2Q9BTF0 503 aaKnown RBP13.94□□□□□ -0.18
LDHB-205ENST00000470280 CCDC87Q9NVE4 849 aa13.94□□□□□ -0.18
LDHB-205ENST00000470280 HEG1Q9ULI3 1381 aa13.94□□□□□ -0.18
LDHB-205ENST00000470280 BTBD11A6QL63 1104 aa13.93□□□□□ -0.18
LDHB-205ENST00000470280 CCDC146Q8IYE0 955 aa13.93□□□□□ -0.18
LDHB-205ENST00000470280 VSIG10Q8N0Z9 540 aa13.93□□□□□ -0.18
LDHB-205ENST00000470280 ZBTB1Q9Y2K1 713 aa13.93□□□□□ -0.18
LDHB-205ENST00000470280 MYCNP04198 464 aaPredicted RBP13.92□□□□□ -0.18
LDHB-205ENST00000470280 CCDC184Q52MB2 194 aa13.92□□□□□ -0.18
LDHB-205ENST00000470280 NLGN2Q8NFZ4 835 aa13.92□□□□□ -0.18
LDHB-205ENST00000470280 MIS18AQ9NYP9 233 aa13.92□□□□□ -0.18
LDHB-205ENST00000470280 SRP68Q9UHB9 627 aaKnown RBP13.92□□□□□ -0.18
LDHB-205ENST00000470280 ADAMTS8Q9UP79 889 aa13.92□□□□□ -0.18
LDHB-205ENST00000470280 SOS1Q07889 1333 aaPredicted RBP13.91□□□□□ -0.18
LDHB-205ENST00000470280 MAPK8IP3Q9UPT6 1336 aa13.91□□□□□ -0.18
LDHB-205ENST00000470280 C4AP0C0L4 1744 aa13.91□□□□□ -0.18
LDHB-205ENST00000470280 PRAMEF22A3QJZ6 481 aa13.91□□□□□ -0.18
LDHB-205ENST00000470280 NEFMP07197 916 aa13.91□□□□□ -0.18
LDHB-205ENST00000470280 GYS1P13807 737 aa13.91□□□□□ -0.18
LDHB-205ENST00000470280 RFC4P35249 363 aa13.91□□□□□ -0.18
LDHB-205ENST00000470280 DLG5Q8TDM6 1919 aa13.91□□□□□ -0.18
LDHB-205ENST00000470280 TAF7Q15545 349 aaPredicted RBP13.9□□□□□ -0.18
LDHB-205ENST00000470280 FMNL2Q96PY5 1086 aa13.9□□□□□ -0.18
LDHB-205ENST00000470280 PNNQ9H307 717 aaKnown RBP13.9□□□□□ -0.18
LDHB-205ENST00000470280 RRP7AQ9Y3A4 280 aaKnown RBP13.9□□□□□ -0.18
LDHB-205ENST00000470280 USP42Q9H9J4 1324 aaKnown RBP13.9□□□□□ -0.19
LDHB-205ENST00000470280 MMP10P09238 476 aa13.89□□□□□ -0.19
LDHB-205ENST00000470280 CANXP27824 592 aaKnown RBP13.89□□□□□ -0.19
LDHB-205ENST00000470280 TMPOP42166 694 aaKnown RBP13.89□□□□□ -0.19
LDHB-205ENST00000470280 RIPK4P57078 832 aa13.89□□□□□ -0.19
LDHB-205ENST00000470280 WDR43Q15061 677 aaKnown RBP eCLIP13.89□□□□□ -0.19
LDHB-205ENST00000470280 USP16Q9Y5T5 823 aa13.89□□□□□ -0.19
LDHB-205ENST00000470280 COL15A1P39059 1388 aa13.88□□□□□ -0.19
LDHB-205ENST00000470280 A1BGP04217 495 aa13.88□□□□□ -0.19
LDHB-205ENST00000470280 POLA2Q14181 598 aa13.88□□□□□ -0.19
LDHB-205ENST00000470280 FKBP8Q14318 412 aa13.88□□□□□ -0.19
LDHB-205ENST00000470280 NLGN1Q8N2Q7 840 aa13.88□□□□□ -0.19
LDHB-205ENST00000470280 STARD3NLO95772 234 aa13.87□□□□□ -0.19
LDHB-205ENST00000470280 USPL1Q5W0Q7 1092 aa13.87□□□□□ -0.19
LDHB-205ENST00000470280 RUNDC1Q96C34 613 aa13.87□□□□□ -0.19
LDHB-205ENST00000470280 PIP4K2AP48426 406 aaPredicted RBP13.86□□□□□ -0.19
LDHB-205ENST00000470280 EIF5P55010 431 aaKnown RBP13.86□□□□□ -0.19
LDHB-205ENST00000470280 NEUROD2Q15784 382 aa13.86□□□□□ -0.19
LDHB-205ENST00000470280 TEX13AQ9BXU3 409 aaPredicted RBP13.86□□□□□ -0.19
LDHB-205ENST00000470280 BCL2L12Q9HB09 334 aa13.86□□□□□ -0.19
LDHB-205ENST00000470280 CD2APQ9Y5K6 639 aa13.86□□□□□ -0.19
LDHB-205ENST00000470280 SNRPA1P09661 255 aaKnown RBP13.85□□□□□ -0.19
LDHB-205ENST00000470280 DDR1Q08345 913 aa13.85□□□□□ -0.19
LDHB-205ENST00000470280 NARFQ9UHQ1 456 aa13.85□□□□□ -0.19
LDHB-205ENST00000470280 TRIM35Q9UPQ4 493 aa13.85□□□□□ -0.19
LDHB-205ENST00000470280 KDM3BQ7LBC6 1761 aa13.84□□□□□ -0.19
LDHB-205ENST00000470280 EIF4A1P60842 406 aaKnown RBP13.84□□□□□ -0.19
LDHB-205ENST00000470280 NBPF26B4DH59 902 aa13.83□□□□□ -0.2
LDHB-205ENST00000470280 ZPR1O75312 459 aa13.83□□□□□ -0.2
LDHB-205ENST00000470280 YBX3P16989 372 aaKnown RBP eCLIP13.83□□□□□ -0.25e-38■□□□□ 8
LDHB-205ENST00000470280 TM4SF1P30408 202 aa13.83□□□□□ -0.2
LDHB-205ENST00000470280 IL6STP40189 918 aaPredicted RBP13.83□□□□□ -0.2
LDHB-205ENST00000470280 NBPF10Q6P3W6 841 aaKnown RBP13.83□□□□□ -0.2
LDHB-205ENST00000470280 NBPF15Q8N660 670 aa13.83□□□□□ -0.2
LDHB-205ENST00000470280 PNISRQ8TF01 805 aaKnown RBP13.83□□□□□ -0.2
LDHB-205ENST00000470280 TBC1D2BQ9UPU7 963 aa13.83□□□□□ -0.2
LDHB-205ENST00000470280 ZNF330Q9Y3S2 320 aaPredicted RBP13.83□□□□□ -0.2
LDHB-205ENST00000470280 C10orf71Q711Q0 1435 aa13.82□□□□□ -0.2
LDHB-205ENST00000470280 POLRMTO00411 1230 aaKnown RBP13.82□□□□□ -0.2
LDHB-205ENST00000470280 ANP32CO43423 234 aa13.82□□□□□ -0.2
LDHB-205ENST00000470280 GIGYF1O75420 1035 aaPredicted RBP13.82□□□□□ -0.2
LDHB-205ENST00000470280 NFIXQ14938 502 aa13.82□□□□□ -0.2
LDHB-205ENST00000470280 PELP1Q8IZL8 1130 aaKnown RBP13.82□□□□□ -0.2
LDHB-205ENST00000470280 WWC3Q9ULE0 1092 aa13.82□□□□□ -0.2
LDHB-205ENST00000470280 PARP3Q9Y6F1 533 aa13.82□□□□□ -0.2
LDHB-205ENST00000470280 APAF1O14727 1248 aa13.81□□□□□ -0.2
LDHB-205ENST00000470280 LMOD3Q0VAK6 560 aa13.81□□□□□ -0.2
LDHB-205ENST00000470280 GPR162Q16538 588 aa13.81□□□□□ -0.2
LDHB-205ENST00000470280 TSPYL4Q9UJ04 414 aa13.81□□□□□ -0.2
LDHB-205ENST00000470280 PXDNLA1KZ92 1463 aa13.8□□□□□ -0.2
LDHB-205ENST00000470280 SENP3-EIF4A1A0A087X0R7 540 aa13.8□□□□□ -0.2
LDHB-205ENST00000470280 CAMTA2O94983 1202 aa13.8□□□□□ -0.2
LDHB-205ENST00000470280 KIAA1551Q9HCM1 1747 aa13.8□□□□□ -0.2
LDHB-205ENST00000470280 A0A087WZG4 1122 aa13.79□□□□□ -0.2
LDHB-205ENST00000470280 TBC1D9BQ66K14 1250 aa13.79□□□□□ -0.2
LDHB-205ENST00000470280 MRS2Q9HD23 443 aa13.79□□□□□ -0.2
LDHB-205ENST00000470280 KIF13BQ9NQT8 1826 aa13.78□□□□□ -0.2
LDHB-205ENST00000470280 A0A0G2JLW4 131 aa13.78□□□□□ -0.2
LDHB-205ENST00000470280 CHL1O00533 1208 aa13.78□□□□□ -0.2
LDHB-205ENST00000470280 KRT24Q2M2I5 525 aa13.78□□□□□ -0.2
LDHB-205ENST00000470280 BICDL1Q6ZP65 573 aa13.78□□□□□ -0.2
LDHB-205ENST00000470280 DZIP3Q86Y13 1208 aaKnown RBP13.78□□□□□ -0.2
LDHB-205ENST00000470280 SCN7AQ01118 1682 aa13.78□□□□□ -0.2
LDHB-205ENST00000470280 LAMB4A4D0S4 1761 aa13.78□□□□□ -0.2
LDHB-205ENST00000470280 DPEP1P16444 411 aa13.77□□□□□ -0.21
LDHB-205ENST00000470280 KCNA3P22001 575 aa13.77□□□□□ -0.21
LDHB-205ENST00000470280 YY1P25490 414 aa13.77□□□□□ -0.21
LDHB-205ENST00000470280 BABAM1Q9NWV8 329 aa13.77□□□□□ -0.21
LDHB-205ENST00000470280 LAS1LQ9Y4W2 734 aaKnown RBP13.77□□□□□ -0.21
LDHB-205ENST00000470280 SERPINB2P05120 415 aa13.76□□□□□ -0.21
LDHB-205ENST00000470280 TGFB2P61812 414 aa13.76□□□□□ -0.21
LDHB-205ENST00000470280 N4BP2Q86UW6 1770 aaPredicted RBP13.76□□□□□ -0.21
LDHB-205ENST00000470280 CARMIL3Q8ND23 1372 aa13.75□□□□□ -0.21
LDHB-205ENST00000470280 UTRNP46939 3433 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms