RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 BCL2L13Q9BXK5 485 aa14.48□□□□□ -0.09
SREBF1-209ENST00000470247 LY75O60449 1722 aa14.47□□□□□ -0.09
SREBF1-209ENST00000470247 TXNRD1Q16881 649 aa14.47□□□□□ -0.09
SREBF1-209ENST00000470247 ILDR2Q71H61 639 aa14.47□□□□□ -0.09
SREBF1-209ENST00000470247 LINC00116Q8NCU8 138 aa14.47□□□□□ -0.09
SREBF1-209ENST00000470247 CHPF2Q9P2E5 772 aa14.47□□□□□ -0.09
SREBF1-209ENST00000470247 TJP1Q07157 1748 aa14.46□□□□□ -0.09
SREBF1-209ENST00000470247 TNS1Q9HBL0 1735 aaKnown RBP14.46□□□□□ -0.09
SREBF1-209ENST00000470247 RNF123Q5XPI4 1314 aa14.46□□□□□ -0.09
SREBF1-209ENST00000470247 ZNF831Q5JPB2 1677 aa14.46□□□□□ -0.09
SREBF1-209ENST00000470247 CICQ96RK0 1608 aaPredicted RBP14.46□□□□□ -0.09
SREBF1-209ENST00000470247 ANXA1P04083 346 aa14.46□□□□□ -0.09
SREBF1-209ENST00000470247 SLC4A2P04920 1241 aa14.46□□□□□ -0.09
SREBF1-209ENST00000470247 INTS5Q6P9B9 1019 aaKnown RBP14.46□□□□□ -0.09
SREBF1-209ENST00000470247 G2E3Q7L622 706 aa14.46□□□□□ -0.09
SREBF1-209ENST00000470247 CAMKK2Q96RR4 588 aa14.46□□□□□ -0.09
SREBF1-209ENST00000470247 CCNL1Q9UK58 526 aaPredicted RBP14.46□□□□□ -0.09
SREBF1-209ENST00000470247 STARD3NLO95772 234 aa14.45□□□□□ -0.1
SREBF1-209ENST00000470247 PIP4K2AP48426 406 aaPredicted RBP14.45□□□□□ -0.1
SREBF1-209ENST00000470247 SLC27A3Q5K4L6 730 aa14.45□□□□□ -0.1
SREBF1-209ENST00000470247 DDX21Q9NR30 783 aaKnown RBP eCLIP14.45□□□□□ -0.1
SREBF1-209ENST00000470247 SMC4Q9NTJ3 1288 aa14.45□□□□□ -0.1
SREBF1-209ENST00000470247 ERBB4Q15303 1308 aa14.44□□□□□ -0.1
SREBF1-209ENST00000470247 CRKLP46109 303 aaKnown RBP14.44□□□□□ -0.1
SREBF1-209ENST00000470247 EN1Q05925 392 aaPredicted RBP14.44□□□□□ -0.1
SREBF1-209ENST00000470247 CHMP4AQ9BY43 222 aa14.44□□□□□ -0.1
SREBF1-209ENST00000470247 DBF4Q9UBU7 674 aaPredicted RBP14.44□□□□□ -0.1
SREBF1-209ENST00000470247 ZBTB1Q9Y2K1 713 aa14.44□□□□□ -0.1
SREBF1-209ENST00000470247 SUPT16HQ9Y5B9 1047 aaKnown RBP14.44□□□□□ -0.1
SREBF1-209ENST00000470247 RC3H1Q5TC82 1133 aaKnown RBP14.43□□□□□ -0.1
SREBF1-209ENST00000470247 DEFB132Q7Z7B7 95 aa14.43□□□□□ -0.1
SREBF1-209ENST00000470247 UPF1Q92900 1129 aaKnown RBP eCLIP14.43□□□□□ -0.1
SREBF1-209ENST00000470247 PHAXQ9H814 394 aaKnown RBP14.43□□□□□ -0.1
SREBF1-209ENST00000470247 MYH14Q7Z406 1995 aaKnown RBP14.43□□□□□ -0.1
SREBF1-209ENST00000470247 LAMB4A4D0S4 1761 aa14.42□□□□□ -0.1
SREBF1-209ENST00000470247 PLIN1O60240 522 aa14.42□□□□□ -0.1
SREBF1-209ENST00000470247 EZH2Q15910 746 aaKnown RBP14.42□□□□□ -0.1
SREBF1-209ENST00000470247 CCDC125Q86Z20 511 aa14.42□□□□□ -0.1
SREBF1-209ENST00000470247 STK31Q9BXU1 1019 aa14.42□□□□□ -0.1
SREBF1-209ENST00000470247 CCDC87Q9NVE4 849 aa14.42□□□□□ -0.1
SREBF1-209ENST00000470247 NOB1Q9ULX3 412 aaKnown RBP14.42□□□□□ -0.1
SREBF1-209ENST00000470247 TNNQ9UQP3 1299 aa14.42□□□□□ -0.1
SREBF1-209ENST00000470247 CNTNAP4Q9C0A0 1308 aa14.41□□□□□ -0.1
SREBF1-209ENST00000470247 EIF5P55010 431 aaKnown RBP14.41□□□□□ -0.1
SREBF1-209ENST00000470247 AMIGO3Q86WK7 504 aa14.41□□□□□ -0.1
SREBF1-209ENST00000470247 HYPKQ9NX55 129 aa14.41□□□□□ -0.1
SREBF1-209ENST00000470247 COL5A3P25940 1745 aaPredicted RBP14.41□□□□□ -0.1
SREBF1-209ENST00000470247 MYL6BP14649 208 aa14.4□□□□□ -0.1
SREBF1-209ENST00000470247 CANXP27824 592 aaKnown RBP14.4□□□□□ -0.1
SREBF1-209ENST00000470247 RRP1P56182 461 aaKnown RBP14.4□□□□□ -0.1
SREBF1-209ENST00000470247 FLIIQ13045 1269 aa14.4□□□□□ -0.1
SREBF1-209ENST00000470247 COPS6Q7L5N1 327 aa14.4□□□□□ -0.1
SREBF1-209ENST00000470247 ARHGAP45Q92619 1136 aa14.4□□□□□ -0.1
SREBF1-209ENST00000470247 RREB1Q92766 1687 aa14.39□□□□□ -0.11
SREBF1-209ENST00000470247 TAF1LQ8IZX4 1826 aa14.39□□□□□ -0.11
SREBF1-209ENST00000470247 RPS6KA4O75676 772 aa14.39□□□□□ -0.11
SREBF1-209ENST00000470247 IL6STP40189 918 aaPredicted RBP14.39□□□□□ -0.11
SREBF1-209ENST00000470247 BAG6P46379 1132 aa14.39□□□□□ -0.11
SREBF1-209ENST00000470247 SF3B2Q13435 895 aaKnown RBP14.39□□□□□ -0.11
SREBF1-209ENST00000470247 TTLL7Q6ZT98 887 aa14.39□□□□□ -0.11
SREBF1-209ENST00000470247 SMIM5Q71RC9 77 aa14.39□□□□□ -0.11
SREBF1-209ENST00000470247 XAGE3Q8WTP9 111 aa14.39□□□□□ -0.11
SREBF1-209ENST00000470247 CACNA1FO60840 1977 aa14.38□□□□□ -0.11
SREBF1-209ENST00000470247 RGPD3A6NKT7 1758 aaPredicted RBP14.38□□□□□ -0.11
SREBF1-209ENST00000470247 RGPD4Q7Z3J3 1758 aa14.38□□□□□ -0.11
SREBF1-209ENST00000470247 TRIM27P14373 513 aa14.38□□□□□ -0.11
SREBF1-209ENST00000470247 ATF7IPQ6VMQ6 1270 aa14.38□□□□□ -0.11
SREBF1-209ENST00000470247 FRAT1Q92837 279 aaPredicted RBP14.38□□□□□ -0.11
SREBF1-209ENST00000470247 AKT1S1Q96B36 256 aa14.38□□□□□ -0.11
SREBF1-209ENST00000470247 PTPRCP08575 1304 aa14.38□□□□□ -0.11
SREBF1-209ENST00000470247 KIF16BQ96L93 1317 aa14.38□□□□□ -0.11
SREBF1-209ENST00000470247 RLBP1P12271 317 aa14.37□□□□□ -0.11
SREBF1-209ENST00000470247 ZNF827Q17R98 1081 aa14.37□□□□□ -0.11
SREBF1-209ENST00000470247 C20orf194Q5TEA3 1177 aa14.37□□□□□ -0.11
SREBF1-209ENST00000470247 ZKSCAN2Q63HK3 967 aa14.37□□□□□ -0.11
SREBF1-209ENST00000470247 ADCY9O60503 1353 aa14.36□□□□□ -0.11
SREBF1-209ENST00000470247 C4BP0C0L5 1744 aa14.36□□□□□ -0.11
SREBF1-209ENST00000470247 F6X3S4 739 aa14.36□□□□□ -0.11
SREBF1-209ENST00000470247 IPO8O15397 1037 aaKnown RBP14.36□□□□□ -0.11
SREBF1-209ENST00000470247 AIMP1Q12904 312 aaKnown RBP14.36□□□□□ -0.11
SREBF1-209ENST00000470247 PI4KAP2A4QPH2 592 aa14.35□□□□□ -0.11
SREBF1-209ENST00000470247 GNPATO15228 680 aa14.35□□□□□ -0.11
SREBF1-209ENST00000470247 FKBP5Q13451 457 aaPredicted RBP14.35□□□□□ -0.11
SREBF1-209ENST00000470247 KSR2Q6VAB6 950 aa14.35□□□□□ -0.11
SREBF1-209ENST00000470247 ANKRD13DQ6ZTN6 518 aa14.35□□□□□ -0.11
SREBF1-209ENST00000470247 PI4KAP1Q8N8J0 262 aa14.35□□□□□ -0.11
SREBF1-209ENST00000470247 API5Q9BZZ5 524 aaKnown RBP14.35□□□□□ -0.11
SREBF1-209ENST00000470247 ANO8Q9HCE9 1232 aaPredicted RBP14.35□□□□□ -0.11
SREBF1-209ENST00000470247 HMGB2P26583 209 aaKnown RBP14.34□□□□□ -0.11
SREBF1-209ENST00000470247 PDE3AQ14432 1141 aa14.34□□□□□ -0.11
SREBF1-209ENST00000470247 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.34□□□□□ -0.11
SREBF1-209ENST00000470247 PLBD2Q8NHP8 589 aa14.34□□□□□ -0.11
SREBF1-209ENST00000470247 PANK1Q8TE04 598 aa14.34□□□□□ -0.11
SREBF1-209ENST00000470247 CLUAP1Q96AJ1 413 aa14.34□□□□□ -0.11
SREBF1-209ENST00000470247 TBC1D2BQ9UPU7 963 aa14.34□□□□□ -0.11
SREBF1-209ENST00000470247 RTCBQ9Y3I0 505 aaKnown RBP14.34□□□□□ -0.11
SREBF1-209ENST00000470247 ABCC4O15439 1325 aa14.34□□□□□ -0.11
SREBF1-209ENST00000470247 CAMTA2O94983 1202 aa14.33□□□□□ -0.12
SREBF1-209ENST00000470247 DZIP1LQ8IYY4 767 aaKnown RBP14.33□□□□□ -0.12
SREBF1-209ENST00000470247 ARHGEF1Q92888 912 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms