RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 ZDHHC1Q8WTX9 485 aa11.53□□□□□ -0.56
COL11A1-208ENST00000470170 ACDQ96AP0 544 aa11.53□□□□□ -0.56
COL11A1-208ENST00000470170 ZNF594Q96JF6 807 aaPredicted RBP11.53□□□□□ -0.56
COL11A1-208ENST00000470170 PHF24Q9UPV7 400 aa11.53□□□□□ -0.56
COL11A1-208ENST00000470170 MAFBQ9Y5Q3 323 aaPredicted RBP11.53□□□□□ -0.56
COL11A1-208ENST00000470170 PALM3A6NDB9 673 aaPredicted RBP11.52□□□□□ -0.57
COL11A1-208ENST00000470170 SLC9A9Q8IVB4 645 aa11.52□□□□□ -0.57
COL11A1-208ENST00000470170 NSFL1CQ9UNZ2 370 aaKnown RBP11.52□□□□□ -0.57
COL11A1-208ENST00000470170 BNIP3LO60238 219 aa11.51□□□□□ -0.57
COL11A1-208ENST00000470170 ARSJQ5FYB0 599 aaPredicted RBP11.51□□□□□ -0.57
COL11A1-208ENST00000470170 LARGE2Q8N3Y3 721 aa11.51□□□□□ -0.57
COL11A1-208ENST00000470170 NDFIP2Q9NV92 336 aa11.51□□□□□ -0.57
COL11A1-208ENST00000470170 ZDHHC3Q9NYG2 299 aa11.51□□□□□ -0.57
COL11A1-208ENST00000470170 A0A1W2PNR3 127 aa11.5□□□□□ -0.57
COL11A1-208ENST00000470170 TATP17735 454 aaPredicted RBP11.5□□□□□ -0.57
COL11A1-208ENST00000470170 TXLNAP40222 546 aa11.5□□□□□ -0.57
COL11A1-208ENST00000470170 PPP1R12CQ9BZL4 782 aa11.5□□□□□ -0.57
COL11A1-208ENST00000470170 ZCCHC2Q9C0B9 1178 aaKnown RBP11.5□□□□□ -0.57
COL11A1-208ENST00000470170 ATXN7L1Q9ULK2 861 aaPredicted RBP11.5□□□□□ -0.57
COL11A1-208ENST00000470170 SIX5Q8N196 739 aa11.49□□□□□ -0.57
COL11A1-208ENST00000470170 L3MBTL2Q969R5 705 aa11.49□□□□□ -0.57
COL11A1-208ENST00000470170 SFI1A8K8P3 1242 aa11.48□□□□□ -0.57
COL11A1-208ENST00000470170 BCRP11274 1271 aa11.48□□□□□ -0.57
COL11A1-208ENST00000470170 FGFR3P22607 806 aa11.48□□□□□ -0.57
COL11A1-208ENST00000470170 MAP2K3P46734 347 aa11.48□□□□□ -0.57
COL11A1-208ENST00000470170 FIGNL1Q6PIW4 674 aa11.48□□□□□ -0.57
COL11A1-208ENST00000470170 NLRP8Q86W28 1048 aa11.48□□□□□ -0.57
COL11A1-208ENST00000470170 ZIC5Q96T25 663 aa11.48□□□□□ -0.57
COL11A1-208ENST00000470170 TSPAN10Q9H1Z9 355 aaPredicted RBP11.48□□□□□ -0.57
COL11A1-208ENST00000470170 DKK1O94907 266 aa11.47□□□□□ -0.57
COL11A1-208ENST00000470170 RASA1P20936 1047 aa11.47□□□□□ -0.57
COL11A1-208ENST00000470170 NOS2P35228 1153 aa11.47□□□□□ -0.57
COL11A1-208ENST00000470170 GSK3AP49840 483 aa11.47□□□□□ -0.57
COL11A1-208ENST00000470170 KCNMA1Q12791 1236 aa11.47□□□□□ -0.57
COL11A1-208ENST00000470170 TEAD4Q15561 434 aa11.47□□□□□ -0.57
COL11A1-208ENST00000470170 SH3PXD2AQ5TCZ1 1133 aa11.47□□□□□ -0.57
COL11A1-208ENST00000470170 TSEN2Q8NCE0 465 aaKnown RBP11.47□□□□□ -0.57
COL11A1-208ENST00000470170 OXCT2Q9BYC2 517 aaPredicted RBP11.47□□□□□ -0.57
COL11A1-208ENST00000470170 ZNF232Q9UNY5 417 aa11.47□□□□□ -0.57
COL11A1-208ENST00000470170 PCDHGC4Q9Y5F7 938 aa11.47□□□□□ -0.57
COL11A1-208ENST00000470170 C2CD2LO14523 706 aa11.46□□□□□ -0.57
COL11A1-208ENST00000470170 MARSP56192 900 aaKnown RBP11.46□□□□□ -0.57
COL11A1-208ENST00000470170 CTBSQ01459 385 aa11.46□□□□□ -0.57
COL11A1-208ENST00000470170 BICDL1Q6ZP65 573 aa11.46□□□□□ -0.57
COL11A1-208ENST00000470170 KLRG1Q96E93 195 aa11.46□□□□□ -0.57
COL11A1-208ENST00000470170 ENAMQ9NRM1 1142 aa11.46□□□□□ -0.57
COL11A1-208ENST00000470170 ZNF777Q9ULD5 760 aaPredicted RBP11.46□□□□□ -0.57
COL11A1-208ENST00000470170 DCDC2BA2VCK2 349 aa11.45□□□□□ -0.58
COL11A1-208ENST00000470170 ATXN7O15265 892 aaPredicted RBP11.45□□□□□ -0.58
COL11A1-208ENST00000470170 BMP4P12644 408 aa11.45□□□□□ -0.58
COL11A1-208ENST00000470170 RNF225M0QZC1 329 aaPredicted RBP11.44□□□□□ -0.58
COL11A1-208ENST00000470170 HCN2Q9UL51 889 aa11.44□□□□□ -0.58
COL11A1-208ENST00000470170 RBM19Q9Y4C8 960 aaKnown RBP11.44□□□□□ -0.58
COL11A1-208ENST00000470170 SERTM1A2A2V5 107 aa11.43□□□□□ -0.58
COL11A1-208ENST00000470170 M0R2N6 131 aa11.43□□□□□ -0.58
COL11A1-208ENST00000470170 OIP5O43482 229 aa11.43□□□□□ -0.58
COL11A1-208ENST00000470170 LMOD1P29536 600 aaPredicted RBP11.43□□□□□ -0.58
COL11A1-208ENST00000470170 CRTC2Q53ET0 693 aaPredicted RBP11.43□□□□□ -0.58
COL11A1-208ENST00000470170 NEDD1Q8NHV4 660 aa11.43□□□□□ -0.58
COL11A1-208ENST00000470170 GJA3Q9Y6H8 435 aa11.43□□□□□ -0.58
COL11A1-208ENST00000470170 EML1O00423 815 aa11.42□□□□□ -0.58
COL11A1-208ENST00000470170 KHNYNO15037 678 aaKnown RBP11.42□□□□□ -0.58
COL11A1-208ENST00000470170 PSMA6P60900 246 aaKnown RBP11.42□□□□□ -0.58
COL11A1-208ENST00000470170 KANK4Q5T7N3 995 aaPredicted RBP11.42□□□□□ -0.58
COL11A1-208ENST00000470170 LARP1Q6PKG0 1096 aaKnown RBP11.42□□□□□ -0.58
COL11A1-208ENST00000470170 C1orf229Q6ZS94 237 aaPredicted RBP11.42□□□□□ -0.58
COL11A1-208ENST00000470170 MAPTP10636 758 aaKnown RBP11.41□□□□□ -0.58
COL11A1-208ENST00000470170 CD33P20138 364 aa11.41□□□□□ -0.58
COL11A1-208ENST00000470170 IRS1P35568 1242 aa11.41□□□□□ -0.58
COL11A1-208ENST00000470170 RASSF7Q02833 373 aa11.41□□□□□ -0.58
COL11A1-208ENST00000470170 TNP2Q05952 138 aa11.41□□□□□ -0.58
COL11A1-208ENST00000470170 SEC13P55735 322 aa11.4□□□□□ -0.58
COL11A1-208ENST00000470170 PTK7Q13308 1070 aa11.4□□□□□ -0.58
COL11A1-208ENST00000470170 SCARF2Q96GP6 870 aaPredicted RBP11.4□□□□□ -0.58
COL11A1-208ENST00000470170 LRRC4BQ9NT99 713 aa11.4□□□□□ -0.58
COL11A1-208ENST00000470170 SHISA8B8ZZ34 492 aa11.39□□□□□ -0.59
COL11A1-208ENST00000470170 USP17L15C9J2P7 530 aa11.39□□□□□ -0.59
COL11A1-208ENST00000470170 USP17L10C9JJH3 530 aa11.39□□□□□ -0.59
COL11A1-208ENST00000470170 USP17L13C9JLJ4 530 aa11.39□□□□□ -0.59
COL11A1-208ENST00000470170 USP17L12C9JPN9 530 aa11.39□□□□□ -0.59
COL11A1-208ENST00000470170 USP17L11C9JVI0 530 aa11.39□□□□□ -0.59
COL11A1-208ENST00000470170 USP17L21D6R901 530 aa11.39□□□□□ -0.59
COL11A1-208ENST00000470170 USP17L18D6R9N7 530 aa11.39□□□□□ -0.59
COL11A1-208ENST00000470170 USP17L22D6RA61 530 aa11.39□□□□□ -0.59
COL11A1-208ENST00000470170 USP17L17D6RBQ6 530 aa11.39□□□□□ -0.59
COL11A1-208ENST00000470170 USP17L19D6RCP7 530 aa11.39□□□□□ -0.59
COL11A1-208ENST00000470170 USP17L20D6RJB6 530 aa11.39□□□□□ -0.59
COL11A1-208ENST00000470170 USP17L24Q0WX57 530 aa11.39□□□□□ -0.59
COL11A1-208ENST00000470170 LRRC69Q6ZNQ3 347 aa11.39□□□□□ -0.59
COL11A1-208ENST00000470170 HCN4Q9Y3Q4 1203 aa11.39□□□□□ -0.59
COL11A1-208ENST00000470170 C21orf2O43822 256 aa11.38□□□□□ -0.59
COL11A1-208ENST00000470170 PPP1R12BO60237 982 aaPredicted RBP11.38□□□□□ -0.59
COL11A1-208ENST00000470170 LGR5O75473 907 aa11.38□□□□□ -0.59
COL11A1-208ENST00000470170 FAM157BP0CG42 384 aa11.38□□□□□ -0.59
COL11A1-208ENST00000470170 DPYDQ12882 1025 aa11.38□□□□□ -0.59
COL11A1-208ENST00000470170 CFAP70Q5T0N1 1121 aa11.38□□□□□ -0.59
COL11A1-208ENST00000470170 GOLGA6L1Q8N7Z2 621 aa11.38□□□□□ -0.59
COL11A1-208ENST00000470170 GALNT6Q8NCL4 622 aa11.38□□□□□ -0.59
COL11A1-208ENST00000470170 RHPN1Q8TCX5 695 aa11.38□□□□□ -0.59
COL11A1-208ENST00000470170 C7orf43Q8WVR3 580 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms