RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 SF3B2Q13435 895 aaKnown RBP26.72■■□□□ 1.87
BRAF-202ENST00000469930 RC3H1Q5TC82 1133 aaKnown RBP26.72■■□□□ 1.87
BRAF-202ENST00000469930 CACNA1FO60840 1977 aa26.71■■□□□ 1.87
BRAF-202ENST00000469930 COL5A3P25940 1745 aaPredicted RBP26.71■■□□□ 1.87
BRAF-202ENST00000469930 TXNRD1Q16881 649 aa26.71■■□□□ 1.87
BRAF-202ENST00000469930 PROM2Q8N271 834 aa26.71■■□□□ 1.87
BRAF-202ENST00000469930 DBF4Q9UBU7 674 aaPredicted RBP26.71■■□□□ 1.87
BRAF-202ENST00000469930 BAG6P46379 1132 aa26.7■■□□□ 1.86
BRAF-202ENST00000469930 SSH1Q8WYL5 1049 aa26.7■■□□□ 1.86
BRAF-202ENST00000469930 CAMKK2Q96RR4 588 aa26.7■■□□□ 1.86
BRAF-202ENST00000469930 DDX21Q9NR30 783 aaKnown RBP eCLIP26.7■■□□□ 1.86
BRAF-202ENST00000469930 RREB1Q92766 1687 aa26.7■■□□□ 1.86
BRAF-202ENST00000469930 CNTNAP4Q9C0A0 1308 aa26.69■■□□□ 1.86
BRAF-202ENST00000469930 EIF2S2P20042 333 aaKnown RBP26.69■■□□□ 1.86
BRAF-202ENST00000469930 STK31Q9BXU1 1019 aa26.69■■□□□ 1.86
BRAF-202ENST00000469930 TAF1LQ8IZX4 1826 aa26.68■■□□□ 1.86
BRAF-202ENST00000469930 PDIA6Q15084 440 aa26.68■■□□□ 1.86
BRAF-202ENST00000469930 LRRC4BQ9NT99 713 aa26.68■■□□□ 1.86
BRAF-202ENST00000469930 MRPL50Q8N5N7 158 aaKnown RBP26.67■■□□□ 1.86
BRAF-202ENST00000469930 INTS5Q6P9B9 1019 aaKnown RBP26.66■■□□□ 1.86
BRAF-202ENST00000469930 LINC00116Q8NCU8 138 aa26.66■■□□□ 1.86
BRAF-202ENST00000469930 UPF1Q92900 1129 aaKnown RBP eCLIP26.66■■□□□ 1.86
BRAF-202ENST00000469930 HYPKQ9NX55 129 aa26.66■■□□□ 1.86
BRAF-202ENST00000469930 LRP10Q7Z4F1 713 aa26.65■■□□□ 1.86
BRAF-202ENST00000469930 CCDC87Q9NVE4 849 aa26.65■■□□□ 1.86
BRAF-202ENST00000469930 NBPF26B4DH59 902 aa26.64■■□□□ 1.86
BRAF-202ENST00000469930 A1BGP04217 495 aa26.64■■□□□ 1.86
BRAF-202ENST00000469930 SLC4A2P04920 1241 aa26.64■■□□□ 1.86
BRAF-202ENST00000469930 CRKLP46109 303 aaKnown RBP26.64■■□□□ 1.86
BRAF-202ENST00000469930 NBPF14Q5TI25 921 aa26.64■■□□□ 1.86
BRAF-202ENST00000469930 NBPF10Q6P3W6 841 aaKnown RBP26.64■■□□□ 1.86
BRAF-202ENST00000469930 NBPF15Q8N660 670 aa26.64■■□□□ 1.86
BRAF-202ENST00000469930 SMC4Q9NTJ3 1288 aa26.64■■□□□ 1.86
BRAF-202ENST00000469930 CHPF2Q9P2E5 772 aa26.64■■□□□ 1.86
BRAF-202ENST00000469930 IL6STP40189 918 aaPredicted RBP26.63■■□□□ 1.85
BRAF-202ENST00000469930 EN1Q05925 392 aaPredicted RBP26.62■■□□□ 1.85
BRAF-202ENST00000469930 ARHGAP45Q92619 1136 aa26.62■■□□□ 1.85
BRAF-202ENST00000469930 RNF123Q5XPI4 1314 aa26.62■■□□□ 1.85
BRAF-202ENST00000469930 KIF16BQ96L93 1317 aa26.62■■□□□ 1.85
BRAF-202ENST00000469930 C4BP0C0L5 1744 aa26.62■■□□□ 1.85
BRAF-202ENST00000469930 BCAR3O75815 825 aa26.61■■□□□ 1.85
BRAF-202ENST00000469930 NECTIN2Q92692 538 aa26.61■■□□□ 1.85
BRAF-202ENST00000469930 EIF5P55010 431 aaKnown RBP26.6■■□□□ 1.85
BRAF-202ENST00000469930 EZH2Q15910 746 aaKnown RBP26.6■■□□□ 1.85
BRAF-202ENST00000469930 MYH14Q7Z406 1995 aaKnown RBP26.6■■□□□ 1.85
BRAF-202ENST00000469930 PTPRCP08575 1304 aa26.6■■□□□ 1.85
BRAF-202ENST00000469930 RPS6KA4O75676 772 aa26.59■■□□□ 1.85
BRAF-202ENST00000469930 KCNQ4P56696 695 aa26.59■■□□□ 1.85
BRAF-202ENST00000469930 PROSER3Q2NL68 480 aa26.59■■□□□ 1.85
BRAF-202ENST00000469930 ZBTB1Q9Y2K1 713 aa26.59■■□□□ 1.85
BRAF-202ENST00000469930 TCERG1O14776 1098 aaKnown RBP26.57■■□□□ 1.84
BRAF-202ENST00000469930 IPO8O15397 1037 aaKnown RBP26.57■■□□□ 1.84
BRAF-202ENST00000469930 FLIIQ13045 1269 aa26.56■■□□□ 1.84
BRAF-202ENST00000469930 DEFB132Q7Z7B7 95 aa26.56■■□□□ 1.84
BRAF-202ENST00000469930 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.56■■□□□ 1.84
BRAF-202ENST00000469930 BCL2L13Q9BXK5 485 aa26.56■■□□□ 1.84
BRAF-202ENST00000469930 RGL2O15211 777 aa26.55■■□□□ 1.84
BRAF-202ENST00000469930 CANXP27824 592 aaKnown RBP26.55■■□□□ 1.84
BRAF-202ENST00000469930 G2E3Q7L622 706 aa26.55■■□□□ 1.84
BRAF-202ENST00000469930 AKT1S1Q96B36 256 aa26.55■■□□□ 1.84
BRAF-202ENST00000469930 PHAXQ9H814 394 aaKnown RBP26.55■■□□□ 1.84
BRAF-202ENST00000469930 A0A087WZG4 1122 aa26.54■■□□□ 1.84
BRAF-202ENST00000469930 MYL6BP14649 208 aa26.54■■□□□ 1.84
BRAF-202ENST00000469930 ADRA2BP18089 450 aa26.54■■□□□ 1.84
BRAF-202ENST00000469930 NOB1Q9ULX3 412 aaKnown RBP26.54■■□□□ 1.84
BRAF-202ENST00000469930 ANXA1P04083 346 aa26.53■■□□□ 1.84
BRAF-202ENST00000469930 COPS6Q7L5N1 327 aa26.53■■□□□ 1.84
BRAF-202ENST00000469930 AK7Q96M32 723 aa26.53■■□□□ 1.84
BRAF-202ENST00000469930 RTCBQ9Y3I0 505 aaKnown RBP26.53■■□□□ 1.84
BRAF-202ENST00000469930 DDX58O95786 925 aaKnown RBP26.52■■□□□ 1.84
BRAF-202ENST00000469930 ZKSCAN2Q63HK3 967 aa26.52■■□□□ 1.84
BRAF-202ENST00000469930 XAGE3Q8WTP9 111 aa26.52■■□□□ 1.84
BRAF-202ENST00000469930 API5Q9BZZ5 524 aaKnown RBP26.52■■□□□ 1.84
BRAF-202ENST00000469930 NUP188Q5SRE5 1749 aa26.51■■□□□ 1.83
BRAF-202ENST00000469930 MS4A1P11836 297 aa26.51■■□□□ 1.83
BRAF-202ENST00000469930 SSFA2P28290 1259 aa26.51■■□□□ 1.83
BRAF-202ENST00000469930 PIP4K2AP48426 406 aaPredicted RBP26.51■■□□□ 1.83
BRAF-202ENST00000469930 RRP1P56182 461 aaKnown RBP26.51■■□□□ 1.83
BRAF-202ENST00000469930 ATF7IPQ6VMQ6 1270 aa26.51■■□□□ 1.83
BRAF-202ENST00000469930 GNPATO15228 680 aa26.5■■□□□ 1.83
BRAF-202ENST00000469930 UBR3Q6ZT12 1888 aa26.5■■□□□ 1.83
BRAF-202ENST00000469930 COL15A1P39059 1388 aa26.49■■□□□ 1.83
BRAF-202ENST00000469930 ERVV-1B6SEH8 477 aa26.49■■□□□ 1.83
BRAF-202ENST00000469930 KSR2Q6VAB6 950 aa26.49■■□□□ 1.83
BRAF-202ENST00000469930 ANKRD13DQ6ZTN6 518 aa26.49■■□□□ 1.83
BRAF-202ENST00000469930 NPM2Q86SE8 214 aaKnown RBP26.49■■□□□ 1.83
BRAF-202ENST00000469930 FLAD1Q8NFF5 587 aa26.49■■□□□ 1.83
BRAF-202ENST00000469930 PLBD2Q8NHP8 589 aa26.49■■□□□ 1.83
BRAF-202ENST00000469930 SUPT16HQ9Y5B9 1047 aaKnown RBP26.49■■□□□ 1.83
BRAF-202ENST00000469930 FKBP5Q13451 457 aaPredicted RBP26.48■■□□□ 1.83
BRAF-202ENST00000469930 PDE3AQ14432 1141 aa26.48■■□□□ 1.83
BRAF-202ENST00000469930 TRIM27P14373 513 aa26.47■■□□□ 1.83
BRAF-202ENST00000469930 ZNF827Q17R98 1081 aa26.47■■□□□ 1.83
BRAF-202ENST00000469930 TTLL7Q6ZT98 887 aa26.47■■□□□ 1.83
BRAF-202ENST00000469930 MAP3K15Q6ZN16 1313 aa26.46■■□□□ 1.83
BRAF-202ENST00000469930 QSER1Q2KHR3 1735 aa26.46■■□□□ 1.83
BRAF-202ENST00000469930 SLC15A2Q16348 729 aa26.46■■□□□ 1.83
BRAF-202ENST00000469930 TRAPPC3LQ5T215 181 aa26.46■■□□□ 1.83
BRAF-202ENST00000469930 FRAT1Q92837 279 aaPredicted RBP26.46■■□□□ 1.83
BRAF-202ENST00000469930 ADCY9O60503 1353 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms