RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 RGPD2P0DJD1 1756 aa7.02□□□□□ -1.29
ITGA6-208ENST00000469534 OVOS2A0A0J9YW53 1432 aa7.01□□□□□ -1.29
ITGA6-208ENST00000469534 OVOS2Q6IE36 1432 aa7.01□□□□□ -1.29
ITGA6-208ENST00000469534 PXDNQ92626 1479 aa7.01□□□□□ -1.29
ITGA6-208ENST00000469534 BRD4O60885 1362 aaPredicted RBP7.01□□□□□ -1.29
ITGA6-208ENST00000469534 RCCD1A6NED2 376 aa7.01□□□□□ -1.29
ITGA6-208ENST00000469534 FAM161AQ3B820 660 aa7.01□□□□□ -1.29
ITGA6-208ENST00000469534 CCDC146Q8IYE0 955 aa7.01□□□□□ -1.29
ITGA6-208ENST00000469534 PHRF1Q9P1Y6 1649 aaKnown RBP7.01□□□□□ -1.29
ITGA6-208ENST00000469534 TTC21AQ8NDW8 1320 aa7.01□□□□□ -1.29
ITGA6-208ENST00000469534 MED1Q15648 1581 aaPredicted RBP7□□□□□ -1.29
ITGA6-208ENST00000469534 U2SURPO15042 1029 aaKnown RBP7□□□□□ -1.29
ITGA6-208ENST00000469534 SLC4A3P48751 1232 aa7□□□□□ -1.29
ITGA6-208ENST00000469534 HNRNPUQ00839 825 aaKnown RBP eCLIP7□□□□□ -1.29
ITGA6-208ENST00000469534 NKX2-3Q8TAU0 364 aa7□□□□□ -1.29
ITGA6-208ENST00000469534 LTV1Q96GA3 475 aaPredicted RBP7□□□□□ -1.29
ITGA6-208ENST00000469534 EIF4ENIF1Q9NRA8 985 aaKnown RBP7□□□□□ -1.29
ITGA6-208ENST00000469534 POLKQ9UBT6 870 aa7□□□□□ -1.29
ITGA6-208ENST00000469534 NPHP3Q7Z494 1330 aa7□□□□□ -1.29
ITGA6-208ENST00000469534 USP54Q70EL1 1684 aa7□□□□□ -1.29
ITGA6-208ENST00000469534 ABCA3Q99758 1704 aa6.99□□□□□ -1.29
ITGA6-208ENST00000469534 CRYBG1Q9Y4K1 1723 aa6.99□□□□□ -1.29
ITGA6-208ENST00000469534 ZC3H6P61129 1189 aaKnown RBP6.99□□□□□ -1.29
ITGA6-208ENST00000469534 HIC1Q14526 733 aa6.99□□□□□ -1.29
ITGA6-208ENST00000469534 WDR43Q15061 677 aaKnown RBP eCLIP6.99□□□□□ -1.29
ITGA6-208ENST00000469534 PNISRQ8TF01 805 aaKnown RBP6.99□□□□□ -1.29
ITGA6-208ENST00000469534 TNS3Q68CZ2 1445 aa6.99□□□□□ -1.29
ITGA6-208ENST00000469534 MAP3K19Q56UN5 1328 aa6.99□□□□□ -1.29
ITGA6-208ENST00000469534 COL3A1P02461 1466 aaPredicted RBP6.98□□□□□ -1.29
ITGA6-208ENST00000469534 ZPR1O75312 459 aa6.98□□□□□ -1.29
ITGA6-208ENST00000469534 AMPHP49418 695 aa6.98□□□□□ -1.29
ITGA6-208ENST00000469534 HAP1P54257 671 aaPredicted RBP6.98□□□□□ -1.29
ITGA6-208ENST00000469534 COPS2P61201 443 aa6.98□□□□□ -1.29
ITGA6-208ENST00000469534 CHRNA2Q15822 529 aa6.98□□□□□ -1.29
ITGA6-208ENST00000469534 RBM26Q5T8P6 1007 aaKnown RBP6.98□□□□□ -1.29
ITGA6-208ENST00000469534 PXYLP1Q8TE99 480 aa6.98□□□□□ -1.29
ITGA6-208ENST00000469534 CFAP53Q96M91 514 aa6.98□□□□□ -1.29
ITGA6-208ENST00000469534 PRR14Q9BWN1 585 aa6.98□□□□□ -1.29
ITGA6-208ENST00000469534 ADAMTS8Q9UP79 889 aa6.98□□□□□ -1.29
ITGA6-208ENST00000469534 SPATA31A3Q5VYP0 1347 aa6.98□□□□□ -1.29
ITGA6-208ENST00000469534 USP31Q70CQ4 1352 aa6.97□□□□□ -1.29
ITGA6-208ENST00000469534 NFAT5O94916 1531 aa6.97□□□□□ -1.29
ITGA6-208ENST00000469534 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.97□□□□□ -1.29
ITGA6-208ENST00000469534 GPR37O15354 613 aa6.97□□□□□ -1.29
ITGA6-208ENST00000469534 TOM1O60784 492 aa6.97□□□□□ -1.29
ITGA6-208ENST00000469534 OATP04181 439 aa6.97□□□□□ -1.29
ITGA6-208ENST00000469534 SLC10A3P09131 477 aa6.97□□□□□ -1.29
ITGA6-208ENST00000469534 HMOX1P09601 288 aa6.97□□□□□ -1.29
ITGA6-208ENST00000469534 U2AF1L5P0DN76 240 aaPredicted RBP6.97□□□□□ -1.29
ITGA6-208ENST00000469534 GGCXP38435 758 aa6.97□□□□□ -1.29
ITGA6-208ENST00000469534 U2AF1Q01081 240 aaKnown RBP eCLIP6.97□□□□□ -1.29
ITGA6-208ENST00000469534 HSP90AB2PQ58FF8 381 aa6.97□□□□□ -1.29
ITGA6-208ENST00000469534 SMYD5Q6GMV2 418 aa6.97□□□□□ -1.29
ITGA6-208ENST00000469534 SLIT3O75094 1523 aa6.96□□□□□ -1.29
ITGA6-208ENST00000469534 SBNO1A3KN83 1393 aa6.96□□□□□ -1.29
ITGA6-208ENST00000469534 NUTM2BA6NNL0 878 aaPredicted RBP6.96□□□□□ -1.3
ITGA6-208ENST00000469534 NUTM2EB1AL46 878 aaPredicted RBP6.96□□□□□ -1.3
ITGA6-208ENST00000469534 DIAPH1O60610 1272 aaKnown RBP6.96□□□□□ -1.3
ITGA6-208ENST00000469534 GCP02774 474 aa6.96□□□□□ -1.3
ITGA6-208ENST00000469534 FECHP22830 423 aa6.96□□□□□ -1.3
ITGA6-208ENST00000469534 EIF4A2Q14240 407 aaKnown RBP6.96□□□□□ -1.3
ITGA6-208ENST00000469534 NUTM2AQ8IVF1 878 aaPredicted RBP6.96□□□□□ -1.3
ITGA6-208ENST00000469534 USHBP1Q8N6Y0 703 aa6.96□□□□□ -1.3
ITGA6-208ENST00000469534 RRP7AQ9Y3A4 280 aaKnown RBP6.96□□□□□ -1.3
ITGA6-208ENST00000469534 PCDHB3Q9Y5E6 796 aa6.96□□□□□ -1.3
ITGA6-208ENST00000469534 COL16A1Q07092 1604 aaPredicted RBP6.96□□□□□ -1.3
ITGA6-208ENST00000469534 AHDC1Q5TGY3 1603 aaPredicted RBP6.96□□□□□ -1.3
ITGA6-208ENST00000469534 SOS2Q07890 1332 aaPredicted RBP6.96□□□□□ -1.3
ITGA6-208ENST00000469534 ACTN4O43707 911 aaKnown RBP6.95□□□□□ -1.3
ITGA6-208ENST00000469534 HOXC9P31274 260 aa6.95□□□□□ -1.3
ITGA6-208ENST00000469534 NEUROD2Q15784 382 aa6.95□□□□□ -1.3
ITGA6-208ENST00000469534 BLOC1S3Q6QNY0 202 aa6.95□□□□□ -1.3
ITGA6-208ENST00000469534 METTL3Q86U44 580 aaKnown RBP6.95□□□□□ -1.3
ITGA6-208ENST00000469534 AEBP1Q8IUX7 1158 aa6.95□□□□□ -1.3
ITGA6-208ENST00000469534 TMUB1Q9BVT8 246 aa6.95□□□□□ -1.3
ITGA6-208ENST00000469534 PDZRN3Q9UPQ7 1066 aa6.95□□□□□ -1.3
ITGA6-208ENST00000469534 CDK12Q9NYV4 1490 aaPredicted RBP6.95□□□□□ -1.3
ITGA6-208ENST00000469534 DLG5Q8TDM6 1919 aa6.95□□□□□ -1.3
ITGA6-208ENST00000469534 USP19O94966 1318 aa6.95□□□□□ -1.3
ITGA6-208ENST00000469534 AATKQ6ZMQ8 1374 aa6.95□□□□□ -1.3
ITGA6-208ENST00000469534 SMG6Q86US8 1419 aaKnown RBP6.94□□□□□ -1.3
ITGA6-208ENST00000469534 GNPATO15228 680 aa6.94□□□□□ -1.3
ITGA6-208ENST00000469534 ADAMTS2O95450 1211 aa6.94□□□□□ -1.3
ITGA6-208ENST00000469534 IL13P35225 146 aa6.94□□□□□ -1.3
ITGA6-208ENST00000469534 LRRC59Q96AG4 307 aaKnown RBP6.94□□□□□ -1.3
ITGA6-208ENST00000469534 COL18A1P39060 1754 aa6.94□□□□□ -1.3
ITGA6-208ENST00000469534 ARHGEF10O15013 1369 aa6.94□□□□□ -1.3
ITGA6-208ENST00000469534 FLT4P35916 1363 aa6.94□□□□□ -1.3
ITGA6-208ENST00000469534 KIAA0232Q92628 1395 aa6.94□□□□□ -1.3
ITGA6-208ENST00000469534 BLMP54132 1417 aaPredicted RBP6.93□□□□□ -1.3
ITGA6-208ENST00000469534 APAF1O14727 1248 aa6.93□□□□□ -1.3
ITGA6-208ENST00000469534 PRKAR2BP31323 418 aa6.93□□□□□ -1.3
ITGA6-208ENST00000469534 KMT5BQ4FZB7 885 aa6.93□□□□□ -1.3
ITGA6-208ENST00000469534 KCNH5Q8NCM2 988 aa6.93□□□□□ -1.3
ITGA6-208ENST00000469534 STRN4Q9NRL3 753 aa6.93□□□□□ -1.3
ITGA6-208ENST00000469534 NUDCQ9Y266 331 aa6.93□□□□□ -1.3
ITGA6-208ENST00000469534 PNPLA6Q8IY17 1366 aa6.93□□□□□ -1.3
ITGA6-208ENST00000469534 RGPD1P0DJD0 1748 aa6.93□□□□□ -1.3
ITGA6-208ENST00000469534 CFHP08603 1231 aa6.92□□□□□ -1.3
ITGA6-208ENST00000469534 CSB-PGBD3P0DP91 1061 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms