RNA–Protein interactions for RNA: ENST00000469318.5

DNAJC11-208, Transcript of DnaJ heat shock protein family (Hsp40) member C11, human

TSL 1 (best)

Gene DNAJC11, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNAJC11-208	ENST00000469318	KDF1	Q8NAX2	398 aa	Predicted RBP	11.18	□□□□□ -0.62
DNAJC11-208	ENST00000469318	MYO19	Q96H55	970 aa		11.18	□□□□□ -0.62
DNAJC11-208	ENST00000469318	CITED4	Q96RK1	184 aa		11.18	□□□□□ -0.62
DNAJC11-208	ENST00000469318	QTRT2	Q9H974	415 aa	Known RBP	11.18	□□□□□ -0.62
DNAJC11-208	ENST00000469318	USP3	Q9Y6I4	520 aa		11.18	□□□□□ -0.62
DNAJC11-208	ENST00000469318	MEN1	O00255	615 aa		11.17	□□□□□ -0.62
DNAJC11-208	ENST00000469318	TNFRSF10B	O14763	440 aa		11.17	□□□□□ -0.62
DNAJC11-208	ENST00000469318	EIF1AX	P47813	144 aa	Known RBP	11.17	□□□□□ -0.62
DNAJC11-208	ENST00000469318	CENPC	Q03188	943 aa		11.17	□□□□□ -0.62
DNAJC11-208	ENST00000469318	TEAD4	Q15561	434 aa		11.17	□□□□□ -0.62
DNAJC11-208	ENST00000469318	POTEA	Q6S8J7	498 aa		11.17	□□□□□ -0.62
DNAJC11-208	ENST00000469318	ITPKC	Q96DU7	683 aa		11.17	□□□□□ -0.62
DNAJC11-208	ENST00000469318	ZNF232	Q9UNY5	417 aa		11.17	□□□□□ -0.62
DNAJC11-208	ENST00000469318	ZIC2	O95409	532 aa	Predicted RBP	11.16	□□□□□ -0.62
DNAJC11-208	ENST00000469318	NOS2	P35228	1153 aa		11.16	□□□□□ -0.62
DNAJC11-208	ENST00000469318	HIRA	P54198	1017 aa	Predicted RBP	11.16	□□□□□ -0.62
DNAJC11-208	ENST00000469318	TMC7	Q7Z402	723 aa		11.16	□□□□□ -0.62
DNAJC11-208	ENST00000469318	TMC1	Q8TDI8	760 aa		11.16	□□□□□ -0.62
DNAJC11-208	ENST00000469318	NGLY1	Q96IV0	654 aa		11.16	□□□□□ -0.62
DNAJC11-208	ENST00000469318	CABP1	Q9NZU7	370 aa		11.16	□□□□□ -0.62
DNAJC11-208	ENST00000469318	PKD2L1	Q9P0L9	805 aa		11.16	□□□□□ -0.62
DNAJC11-208	ENST00000469318	EML1	O00423	815 aa		11.15	□□□□□ -0.62
DNAJC11-208	ENST00000469318	BRD2	P25440	801 aa	Known RBP	11.15	□□□□□ -0.62
DNAJC11-208	ENST00000469318	GTF2E1	P29083	439 aa	Predicted RBP	11.15	□□□□□ -0.62
DNAJC11-208	ENST00000469318	WDR4	P57081	412 aa	Known RBP	11.15	□□□□□ -0.62
DNAJC11-208	ENST00000469318	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.15	□□□□□ -0.62
DNAJC11-208	ENST00000469318	LRFN2	Q9ULH4	789 aa		11.15	□□□□□ -0.62
DNAJC11-208	ENST00000469318	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.14	□□□□□ -0.63
DNAJC11-208	ENST00000469318	AGBL1	Q96MI9	1066 aa		11.14	□□□□□ -0.63
DNAJC11-208	ENST00000469318	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.14	□□□□□ -0.63
DNAJC11-208	ENST00000469318	KLF16	Q9BXK1	252 aa	Predicted RBP	11.14	□□□□□ -0.63
DNAJC11-208	ENST00000469318	IGSF5	Q9NSI5	407 aa		11.14	□□□□□ -0.63
DNAJC11-208	ENST00000469318	TTC24	A2A3L6	582 aa	Predicted RBP	11.13	□□□□□ -0.63
DNAJC11-208	ENST00000469318	VAMP1	P23763	118 aa		11.13	□□□□□ -0.63
DNAJC11-208	ENST00000469318	RELB	Q01201	579 aa		11.13	□□□□□ -0.63
DNAJC11-208	ENST00000469318	ZDHHC1	Q8WTX9	485 aa		11.13	□□□□□ -0.63
DNAJC11-208	ENST00000469318	L3MBTL2	Q969R5	705 aa		11.13	□□□□□ -0.63
DNAJC11-208	ENST00000469318	CCDC87	Q9NVE4	849 aa		11.13	□□□□□ -0.63
DNAJC11-208	ENST00000469318	HCN4	Q9Y3Q4	1203 aa		11.13	□□□□□ -0.63
DNAJC11-208	ENST00000469318	FZD6	O60353	706 aa		11.12	□□□□□ -0.63
DNAJC11-208	ENST00000469318	RTN1	Q16799	776 aa		11.12	□□□□□ -0.63
DNAJC11-208	ENST00000469318	C11orf91	Q3C1V1	193 aa		11.12	□□□□□ -0.63
DNAJC11-208	ENST00000469318	TMEM214	Q6NUQ4	689 aa	Known RBP	11.12	□□□□□ -0.63
DNAJC11-208	ENST00000469318	ALDH16A1	Q8IZ83	802 aa		11.12	□□□□□ -0.63
DNAJC11-208	ENST00000469318	CYP4X1	Q8N118	509 aa		11.12	□□□□□ -0.63
DNAJC11-208	ENST00000469318	NIFK	Q9BYG3	293 aa	Known RBP	11.12	□□□□□ -0.63
DNAJC11-208	ENST00000469318	ZFAND3	Q9H8U3	227 aa		11.12	□□□□□ -0.63
DNAJC11-208	ENST00000469318		J3QL48	77 aa		11.11	□□□□□ -0.63
DNAJC11-208	ENST00000469318	TREH	O43280	583 aa		11.11	□□□□□ -0.63
DNAJC11-208	ENST00000469318	TAGLN	Q01995	201 aa	Known RBP	11.11	□□□□□ -0.63
DNAJC11-208	ENST00000469318	PDE3B	Q13370	1112 aa		11.11	□□□□□ -0.63
DNAJC11-208	ENST00000469318	DMRTB1	Q96MA1	342 aa		11.11	□□□□□ -0.63
DNAJC11-208	ENST00000469318		V9GY48	417 aa	Predicted RBP	11.11	□□□□□ -0.63
DNAJC11-208	ENST00000469318	P4HB	P07237	508 aa	Known RBP	11.1	□□□□□ -0.63
DNAJC11-208	ENST00000469318	TIMP2	P16035	220 aa		11.1	□□□□□ -0.63
DNAJC11-208	ENST00000469318	PLCB3	Q01970	1234 aa		11.1	□□□□□ -0.63
DNAJC11-208	ENST00000469318	SH3PXD2A	Q5TCZ1	1133 aa		11.1	□□□□□ -0.63
DNAJC11-208	ENST00000469318	ZNF295-AS1	Q8N0V1	137 aa		11.1	□□□□□ -0.63
DNAJC11-208	ENST00000469318	PRKD2	Q9BZL6	878 aa		11.1	□□□□□ -0.63
DNAJC11-208	ENST00000469318	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.1	□□□□□ -0.63
DNAJC11-208	ENST00000469318	PARP3	Q9Y6F1	533 aa		11.1	□□□□□ -0.63
DNAJC11-208	ENST00000469318	ZBTB39	O15060	712 aa		11.09	□□□□□ -0.63
DNAJC11-208	ENST00000469318	FGD1	P98174	961 aa		11.09	□□□□□ -0.63
DNAJC11-208	ENST00000469318	DGKZ	Q13574	1117 aa		11.09	□□□□□ -0.63
DNAJC11-208	ENST00000469318	RHBDD1	Q8TEB9	315 aa		11.09	□□□□□ -0.63
DNAJC11-208	ENST00000469318	PHACTR1	Q9C0D0	580 aa		11.09	□□□□□ -0.63
DNAJC11-208	ENST00000469318	GPC1	P35052	558 aa		11.08	□□□□□ -0.64
DNAJC11-208	ENST00000469318	FMR1	Q06787	632 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
DNAJC11-208	ENST00000469318	GNAS	Q5JWF2	1037 aa		11.08	□□□□□ -0.64
DNAJC11-208	ENST00000469318		A0A0G2JS52	829 aa		11.07	□□□□□ -0.64
DNAJC11-208	ENST00000469318	TCF3	P15923	654 aa		11.07	□□□□□ -0.64
DNAJC11-208	ENST00000469318	SLC27A3	Q5K4L6	730 aa		11.07	□□□□□ -0.64
DNAJC11-208	ENST00000469318	C1orf53	Q5VUE5	145 aa		11.07	□□□□□ -0.64
DNAJC11-208	ENST00000469318	ATCAY	Q86WG3	371 aa		11.07	□□□□□ -0.64
DNAJC11-208	ENST00000469318	IFT43	Q96FT9	208 aa		11.07	□□□□□ -0.64
DNAJC11-208	ENST00000469318	FAM129B	Q96TA1	746 aa		11.07	□□□□□ -0.64
DNAJC11-208	ENST00000469318	GDF9	O60383	454 aa		11.06	□□□□□ -0.64
DNAJC11-208	ENST00000469318	MZF1	P28698	734 aa	Predicted RBP	11.06	□□□□□ -0.64
DNAJC11-208	ENST00000469318	USP5	P45974	858 aa		11.06	□□□□□ -0.64
DNAJC11-208	ENST00000469318	EHHADH	Q08426	723 aa		11.06	□□□□□ -0.64
DNAJC11-208	ENST00000469318	DSC3	Q14574	896 aa		11.06	□□□□□ -0.64
DNAJC11-208	ENST00000469318	FAM26D	Q5JW98	314 aa		11.06	□□□□□ -0.64
DNAJC11-208	ENST00000469318	ETFBKMT	Q8IXQ9	262 aa		11.06	□□□□□ -0.64
DNAJC11-208	ENST00000469318	MEIOB	Q8N635	442 aa		11.06	□□□□□ -0.64
DNAJC11-208	ENST00000469318	KLK14	Q9P0G3	267 aa		11.06	□□□□□ -0.64
DNAJC11-208	ENST00000469318	MAPK8	P45983	427 aa		11.05	□□□□□ -0.64
DNAJC11-208	ENST00000469318	MMRN1	Q13201	1228 aa		11.05	□□□□□ -0.64
DNAJC11-208	ENST00000469318	TSEN34	Q9BSV6	310 aa	Known RBP	11.05	□□□□□ -0.64
DNAJC11-208	ENST00000469318	GRIP2	Q9C0E4	1043 aa		11.05	□□□□□ -0.64
DNAJC11-208	ENST00000469318	TOR4A	Q9NXH8	423 aa		11.05	□□□□□ -0.64
DNAJC11-208	ENST00000469318	POLI	Q9UNA4	740 aa		11.05	□□□□□ -0.64
DNAJC11-208	ENST00000469318	ZAP70	P43403	619 aa		11.04	□□□□□ -0.64
DNAJC11-208	ENST00000469318	DNM1	Q05193	864 aa	Known RBP	11.04	□□□□□ -0.64
DNAJC11-208	ENST00000469318	ALKBH8	Q96BT7	664 aa	Known RBP	11.04	□□□□□ -0.64
DNAJC11-208	ENST00000469318	TNFRSF10A	O00220	468 aa		11.03	□□□□□ -0.64
DNAJC11-208	ENST00000469318	IGHA2	P01877	340 aa		11.03	□□□□□ -0.64
DNAJC11-208	ENST00000469318	LDHB	P07195	334 aa	Known RBP	11.03	□□□□□ -0.64
DNAJC11-208	ENST00000469318	PCSK2	P16519	638 aa		11.03	□□□□□ -0.64
DNAJC11-208	ENST00000469318	SMPD1	P17405	629 aa		11.03	□□□□□ -0.64
DNAJC11-208	ENST00000469318	RNF144A	P50876	292 aa	Predicted RBP	11.03	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms