RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 NRXN2Q9P2S2 1712 aa16.7■□□□□ 0.26
ABCF1-204ENST00000468958 MYBBP1AQ9BQG0 1328 aaKnown RBP16.7■□□□□ 0.26
ABCF1-204ENST00000468958 USP42Q9H9J4 1324 aaKnown RBP16.7■□□□□ 0.26
ABCF1-204ENST00000468958 MMP10P09238 476 aa16.69■□□□□ 0.26
ABCF1-204ENST00000468958 YBX3P16989 372 aaKnown RBP eCLIP16.69■□□□□ 0.26
ABCF1-204ENST00000468958 VSIG10Q8N0Z9 540 aa16.69■□□□□ 0.26
ABCF1-204ENST00000468958 RFC4P35249 363 aa16.68■□□□□ 0.26
ABCF1-204ENST00000468958 FKBP8Q14318 412 aa16.68■□□□□ 0.26
ABCF1-204ENST00000468958 COL15A1P39059 1388 aa16.67■□□□□ 0.26
ABCF1-204ENST00000468958 PRAMEF22A3QJZ6 481 aa16.67■□□□□ 0.26
ABCF1-204ENST00000468958 BTBD11A6QL63 1104 aa16.67■□□□□ 0.26
ABCF1-204ENST00000468958 ANP32CO43423 234 aa16.67■□□□□ 0.26
ABCF1-204ENST00000468958 TTC5Q8N0Z6 440 aa16.67■□□□□ 0.26
ABCF1-204ENST00000468958 CD2APQ9Y5K6 639 aa16.67■□□□□ 0.26
ABCF1-204ENST00000468958 C10orf71Q711Q0 1435 aa16.67■□□□□ 0.26
ABCF1-204ENST00000468958 YY1P25490 414 aa16.66■□□□□ 0.26
ABCF1-204ENST00000468958 BCL2L12Q9HB09 334 aa16.66■□□□□ 0.26
ABCF1-204ENST00000468958 PXDNLA1KZ92 1463 aa16.66■□□□□ 0.26
ABCF1-204ENST00000468958 DCAF8L1A6NGE4 600 aa16.65■□□□□ 0.26
ABCF1-204ENST00000468958 DDR1Q08345 913 aa16.65■□□□□ 0.26
ABCF1-204ENST00000468958 GPR162Q16538 588 aa16.65■□□□□ 0.26
ABCF1-204ENST00000468958 PELP1Q8IZL8 1130 aaKnown RBP16.65■□□□□ 0.26
ABCF1-204ENST00000468958 NLGN1Q8N2Q7 840 aa16.65■□□□□ 0.26
ABCF1-204ENST00000468958 THUMPD2Q9BTF0 503 aaKnown RBP16.65■□□□□ 0.26
ABCF1-204ENST00000468958 PRKRIP1Q9H875 184 aaPredicted RBP16.65■□□□□ 0.26
ABCF1-204ENST00000468958 WWC3Q9ULE0 1092 aa16.65■□□□□ 0.26
ABCF1-204ENST00000468958 HTATSF1O43719 755 aaKnown RBP16.64■□□□□ 0.25
ABCF1-204ENST00000468958 CANXP27824 592 aaKnown RBP16.64■□□□□ 0.25
ABCF1-204ENST00000468958 NFE2L2Q16236 605 aa16.64■□□□□ 0.25
ABCF1-204ENST00000468958 USPL1Q5W0Q7 1092 aa16.64■□□□□ 0.25
ABCF1-204ENST00000468958 RTF1Q92541 710 aaKnown RBP16.64■□□□□ 0.25
ABCF1-204ENST00000468958 MIS18AQ9NYP9 233 aa16.64■□□□□ 0.25
ABCF1-204ENST00000468958 ANKRD31Q8N7Z5 1873 aa16.64■□□□□ 0.25
ABCF1-204ENST00000468958 DLEC1Q9Y238 1755 aa16.64■□□□□ 0.25
ABCF1-204ENST00000468958 A1BGP04217 495 aa16.63■□□□□ 0.25
ABCF1-204ENST00000468958 FMNL2Q96PY5 1086 aa16.63■□□□□ 0.25
ABCF1-204ENST00000468958 USP16Q9Y5T5 823 aa16.63■□□□□ 0.25
ABCF1-204ENST00000468958 ARFGEF1Q9Y6D6 1849 aa16.62■□□□□ 0.25
ABCF1-204ENST00000468958 TM4SF1P30408 202 aa16.62■□□□□ 0.25
ABCF1-204ENST00000468958 PIP4K2AP48426 406 aaPredicted RBP16.62■□□□□ 0.25
ABCF1-204ENST00000468958 EIF5P55010 431 aaKnown RBP16.62■□□□□ 0.25
ABCF1-204ENST00000468958 NARFQ9UHQ1 456 aa16.62■□□□□ 0.25
ABCF1-204ENST00000468958 CCDC146Q8IYE0 955 aa16.61■□□□□ 0.25
ABCF1-204ENST00000468958 POLRMTO00411 1230 aaKnown RBP16.6■□□□□ 0.25
ABCF1-204ENST00000468958 STARD3NLO95772 234 aa16.6■□□□□ 0.25
ABCF1-204ENST00000468958 TAF7Q15545 349 aaPredicted RBP16.6■□□□□ 0.25
ABCF1-204ENST00000468958 PNNQ9H307 717 aaKnown RBP16.6■□□□□ 0.25
ABCF1-204ENST00000468958 COL11A2P13942 1736 aaPredicted RBP16.59■□□□□ 0.25
ABCF1-204ENST00000468958 NEFMP07197 916 aa16.59■□□□□ 0.25
ABCF1-204ENST00000468958 PARP3Q9Y6F1 533 aa16.59■□□□□ 0.25
ABCF1-204ENST00000468958 MAPK8IP3Q9UPT6 1336 aa16.59■□□□□ 0.25
ABCF1-204ENST00000468958 ZPR1O75312 459 aa16.58■□□□□ 0.24
ABCF1-204ENST00000468958 NFIXQ14938 502 aa16.58■□□□□ 0.24
ABCF1-204ENST00000468958 CCDC184Q52MB2 194 aa16.58■□□□□ 0.24
ABCF1-204ENST00000468958 TEX13AQ9BXU3 409 aaPredicted RBP16.58■□□□□ 0.24
ABCF1-204ENST00000468958 RRP7AQ9Y3A4 280 aaKnown RBP16.58■□□□□ 0.24
ABCF1-204ENST00000468958 CACNA1SQ13698 1873 aa16.58■□□□□ 0.24
ABCF1-204ENST00000468958 NUP98P52948 1817 aa16.57■□□□□ 0.24
ABCF1-204ENST00000468958 CARMIL3Q8ND23 1372 aa16.57■□□□□ 0.24
ABCF1-204ENST00000468958 A0A0G2JLW4 131 aa16.57■□□□□ 0.24
ABCF1-204ENST00000468958 NBPF26B4DH59 902 aa16.57■□□□□ 0.24
ABCF1-204ENST00000468958 KCNA3P22001 575 aa16.57■□□□□ 0.24
ABCF1-204ENST00000468958 IL6STP40189 918 aaPredicted RBP16.57■□□□□ 0.24
ABCF1-204ENST00000468958 TMPOP42166 694 aaKnown RBP16.57■□□□□ 0.24
ABCF1-204ENST00000468958 NBPF10Q6P3W6 841 aaKnown RBP16.57■□□□□ 0.24
ABCF1-204ENST00000468958 NBPF15Q8N660 670 aa16.57■□□□□ 0.24
ABCF1-204ENST00000468958 ADAMTS8Q9UP79 889 aa16.57■□□□□ 0.24
ABCF1-204ENST00000468958 TBC1D2BQ9UPU7 963 aa16.57■□□□□ 0.24
ABCF1-204ENST00000468958 SNRPA1P09661 255 aaKnown RBP16.56■□□□□ 0.24
ABCF1-204ENST00000468958 DPEP1P16444 411 aa16.56■□□□□ 0.24
ABCF1-204ENST00000468958 RIPK4P57078 832 aa16.56■□□□□ 0.24
ABCF1-204ENST00000468958 ZNF330Q9Y3S2 320 aaPredicted RBP16.56■□□□□ 0.24
ABCF1-204ENST00000468958 EIF4A1P60842 406 aaKnown RBP16.55■□□□□ 0.24
ABCF1-204ENST00000468958 WDR43Q15061 677 aaKnown RBP eCLIP16.55■□□□□ 0.24
ABCF1-204ENST00000468958 TBC1D9BQ66K14 1250 aa16.55■□□□□ 0.24
ABCF1-204ENST00000468958 CAMTA2O94983 1202 aa16.54■□□□□ 0.24
ABCF1-204ENST00000468958 TGFB2P61812 414 aa16.54■□□□□ 0.24
ABCF1-204ENST00000468958 ZNF784Q8NCA9 323 aaPredicted RBP16.54■□□□□ 0.24
ABCF1-204ENST00000468958 TRIM35Q9UPQ4 493 aa16.54■□□□□ 0.24
ABCF1-204ENST00000468958 SBF1O95248 1867 aa16.53■□□□□ 0.24
ABCF1-204ENST00000468958 GIGYF1O75420 1035 aaPredicted RBP16.53■□□□□ 0.24
ABCF1-204ENST00000468958 CHRNA5P30532 468 aa16.53■□□□□ 0.24
ABCF1-204ENST00000468958 BICDL1Q6ZP65 573 aa16.53■□□□□ 0.24
ABCF1-204ENST00000468958 RUNDC1Q96C34 613 aa16.53■□□□□ 0.24
ABCF1-204ENST00000468958 A0A087WZG4 1122 aa16.52■□□□□ 0.24
ABCF1-204ENST00000468958 GRIN3BO60391 1043 aa16.52■□□□□ 0.24
ABCF1-204ENST00000468958 SERPINB2P05120 415 aa16.52■□□□□ 0.24
ABCF1-204ENST00000468958 NEUROD2Q15784 382 aa16.52■□□□□ 0.24
ABCF1-204ENST00000468958 CCDC88AQ3V6T2 1871 aa16.52■□□□□ 0.23
ABCF1-204ENST00000468958 DZIP3Q86Y13 1208 aaKnown RBP16.51■□□□□ 0.23
ABCF1-204ENST00000468958 PNISRQ8TF01 805 aaKnown RBP16.51■□□□□ 0.23
ABCF1-204ENST00000468958 ARFGEF2Q9Y6D5 1785 aa16.51■□□□□ 0.23
ABCF1-204ENST00000468958 CCDC24Q8N4L8 307 aa16.5■□□□□ 0.23
ABCF1-204ENST00000468958 ADCY9O60503 1353 aa16.5■□□□□ 0.23
ABCF1-204ENST00000468958 TNRC6CQ9HCJ0 1690 aaKnown RBP16.5■□□□□ 0.23
ABCF1-204ENST00000468958 ANKRD36CQ5JPF3 1778 aa16.49■□□□□ 0.23
ABCF1-204ENST00000468958 TSPYL4Q9UJ04 414 aa16.49■□□□□ 0.23
ABCF1-204ENST00000468958 BCS1LQ9Y276 419 aa16.49■□□□□ 0.23
ABCF1-204ENST00000468958 KRT24Q2M2I5 525 aa16.48■□□□□ 0.23
ABCF1-204ENST00000468958 DIEXFQ68CQ4 756 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms